RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 CALM2P0DP24 149 aa20.59■□□□□ 0.89
PTPDC1-202ENST00000375360 CALM3P0DP25 149 aa20.59■□□□□ 0.89
PTPDC1-202ENST00000375360 ME3Q16798 604 aa20.59■□□□□ 0.89
PTPDC1-202ENST00000375360 CCDC178Q5BJE1 867 aa20.59■□□□□ 0.89
PTPDC1-202ENST00000375360 CNKSR2Q8WXI2 1034 aa20.59■□□□□ 0.89
PTPDC1-202ENST00000375360 H0YIN7 160 aa20.58■□□□□ 0.89
PTPDC1-202ENST00000375360 HSPD1P10809 573 aaKnown RBP20.58■□□□□ 0.89
PTPDC1-202ENST00000375360 PTPN12Q05209 780 aaKnown RBP20.58■□□□□ 0.89
PTPDC1-202ENST00000375360 EPHA10Q5JZY3 1008 aa20.58■□□□□ 0.89
PTPDC1-202ENST00000375360 NLRP10Q86W26 655 aa20.58■□□□□ 0.89
PTPDC1-202ENST00000375360 SYNE4Q8N205 404 aa20.58■□□□□ 0.89
PTPDC1-202ENST00000375360 TRPC5Q9UL62 973 aaPredicted RBP20.58■□□□□ 0.89
PTPDC1-202ENST00000375360 IGKV5-2P06315 115 aa20.58■□□□□ 0.88
PTPDC1-202ENST00000375360 TGFBRAP1Q8WUH2 860 aa20.58■□□□□ 0.88
PTPDC1-202ENST00000375360 PPRC1Q5VV67 1664 aaKnown RBP20.58■□□□□ 0.88
PTPDC1-202ENST00000375360 DIP2CQ9Y2E4 1556 aa20.58■□□□□ 0.88
PTPDC1-202ENST00000375360 MTIF2P46199 727 aaKnown RBP20.57■□□□□ 0.88
PTPDC1-202ENST00000375360 TMEM87BQ96K49 555 aa20.57■□□□□ 0.88
PTPDC1-202ENST00000375360 PKP1Q13835 747 aa20.57■□□□□ 0.88
PTPDC1-202ENST00000375360 TCERG1LQ5VWI1 586 aa20.57■□□□□ 0.88
PTPDC1-202ENST00000375360 GPCPD1Q9NPB8 672 aa20.57■□□□□ 0.88
PTPDC1-202ENST00000375360 STAP2Q9UGK3 403 aa20.57■□□□□ 0.88
PTPDC1-202ENST00000375360 SASH1O94885 1247 aa20.57■□□□□ 0.88
PTPDC1-202ENST00000375360 FGAP02671 866 aa20.57■□□□□ 0.88
PTPDC1-202ENST00000375360 HLFQ16534 295 aa20.57■□□□□ 0.88
PTPDC1-202ENST00000375360 SKIDA1Q1XH10 827 aa20.57■□□□□ 0.88
PTPDC1-202ENST00000375360 FAM47AQ5JRC9 791 aa20.57■□□□□ 0.88
PTPDC1-202ENST00000375360 GJA3Q9Y6H8 435 aa20.57■□□□□ 0.88
PTPDC1-202ENST00000375360 SNAP23O00161 211 aa20.57■□□□□ 0.88
PTPDC1-202ENST00000375360 ECM2O94769 699 aaPredicted RBP20.57■□□□□ 0.88
PTPDC1-202ENST00000375360 LMOD1P29536 600 aaPredicted RBP20.57■□□□□ 0.88
PTPDC1-202ENST00000375360 ADCK5Q3MIX3 580 aa20.57■□□□□ 0.88
PTPDC1-202ENST00000375360 CACNA2D4Q7Z3S7 1137 aa20.56■□□□□ 0.88
PTPDC1-202ENST00000375360 KIAA1328Q86T90 577 aa20.56■□□□□ 0.88
PTPDC1-202ENST00000375360 RTL9Q8NET4 1388 aa20.56■□□□□ 0.88
PTPDC1-202ENST00000375360 MFSD14BQ5SR56 506 aa20.56■□□□□ 0.88
PTPDC1-202ENST00000375360 C16orf45Q96MC5 204 aaPredicted RBP20.56■□□□□ 0.88
PTPDC1-202ENST00000375360 RUFY1Q96T51 708 aa20.56■□□□□ 0.88
PTPDC1-202ENST00000375360 TMX1Q9H3N1 280 aa20.56■□□□□ 0.88
PTPDC1-202ENST00000375360 SRP68Q9UHB9 627 aaKnown RBP20.56■□□□□ 0.88
PTPDC1-202ENST00000375360 STAT6P42226 847 aa20.56■□□□□ 0.88
PTPDC1-202ENST00000375360 LUC7LQ9NQ29 371 aaKnown RBP20.56■□□□□ 0.88
PTPDC1-202ENST00000375360 PNPLA6Q8IY17 1366 aa20.56■□□□□ 0.88
PTPDC1-202ENST00000375360 MYCNP04198 464 aaPredicted RBP20.56■□□□□ 0.88
PTPDC1-202ENST00000375360 ZNF174Q15697 407 aa20.56■□□□□ 0.88
PTPDC1-202ENST00000375360 PTPN14Q15678 1187 aa20.55■□□□□ 0.88
PTPDC1-202ENST00000375360 WWC2Q6AWC2 1192 aa20.55■□□□□ 0.88
PTPDC1-202ENST00000375360 PAXIP1Q6ZW49 1069 aaPredicted RBP20.55■□□□□ 0.88
PTPDC1-202ENST00000375360 CMTR1Q8N1G2 835 aaKnown RBP20.55■□□□□ 0.88
PTPDC1-202ENST00000375360 LARGE2Q8N3Y3 721 aa20.55■□□□□ 0.88
PTPDC1-202ENST00000375360 RRP36Q96EU6 259 aaKnown RBP20.55■□□□□ 0.88
PTPDC1-202ENST00000375360 NUP88Q99567 741 aaPredicted RBP20.55■□□□□ 0.88
PTPDC1-202ENST00000375360 C6orf50Q9HD87 102 aa20.55■□□□□ 0.88
PTPDC1-202ENST00000375360 TULP4Q9NRJ4 1543 aa20.55■□□□□ 0.88
PTPDC1-202ENST00000375360 CALML3P27482 149 aa20.55■□□□□ 0.88
PTPDC1-202ENST00000375360 FKBP15Q5T1M5 1219 aa20.55■□□□□ 0.88
PTPDC1-202ENST00000375360 AOPEPQ8N6M6 819 aa20.55■□□□□ 0.88
PTPDC1-202ENST00000375360 FAM200AQ8TCP9 573 aa20.55■□□□□ 0.88
PTPDC1-202ENST00000375360 AMPD3Q01432 767 aa20.55■□□□□ 0.88
PTPDC1-202ENST00000375360 TYRO3Q06418 890 aa20.55■□□□□ 0.88
PTPDC1-202ENST00000375360 RRAGBQ5VZM2 374 aa20.55■□□□□ 0.88
PTPDC1-202ENST00000375360 KANK3Q6NY19 840 aa20.55■□□□□ 0.88
PTPDC1-202ENST00000375360 CDC37L1Q7L3B6 337 aa20.55■□□□□ 0.88
PTPDC1-202ENST00000375360 HSP90B2PQ58FF3 399 aa20.54■□□□□ 0.88
PTPDC1-202ENST00000375360 TSG101Q99816 390 aa20.54■□□□□ 0.88
PTPDC1-202ENST00000375360 KRT2P35908 639 aa20.54■□□□□ 0.88
PTPDC1-202ENST00000375360 DSCC1Q9BVC3 393 aa20.54■□□□□ 0.88
PTPDC1-202ENST00000375360 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.54■□□□□ 0.88
PTPDC1-202ENST00000375360 CD2BP2O95400 341 aaKnown RBP20.54■□□□□ 0.88
PTPDC1-202ENST00000375360 ZYXQ15942 572 aaKnown RBP20.54■□□□□ 0.88
PTPDC1-202ENST00000375360 PPP1R12BO60237 982 aaPredicted RBP20.54■□□□□ 0.88
PTPDC1-202ENST00000375360 ZNF589Q86UQ0 364 aaPredicted RBP20.54■□□□□ 0.88
PTPDC1-202ENST00000375360 DIS3L2Q8IYB7 885 aaKnown RBP20.54■□□□□ 0.88
PTPDC1-202ENST00000375360 STX17P56962 302 aa20.53■□□□□ 0.88
PTPDC1-202ENST00000375360 TFAP4Q01664 338 aa20.53■□□□□ 0.88
PTPDC1-202ENST00000375360 DOK7Q18PE1 504 aa20.53■□□□□ 0.88
PTPDC1-202ENST00000375360 SMARCC2Q8TAQ2 1214 aa20.53■□□□□ 0.88
PTPDC1-202ENST00000375360 LMTK2Q8IWU2 1503 aa20.53■□□□□ 0.88
PTPDC1-202ENST00000375360 UQCRHLA0A096LP55 91 aa20.53■□□□□ 0.88
PTPDC1-202ENST00000375360 N4BP3O15049 544 aa20.53■□□□□ 0.88
PTPDC1-202ENST00000375360 UQCRHP07919 91 aa20.53■□□□□ 0.88
PTPDC1-202ENST00000375360 ADD1P35611 737 aaKnown RBP20.53■□□□□ 0.88
PTPDC1-202ENST00000375360 SPECC1Q5M775 1068 aa20.53■□□□□ 0.88
PTPDC1-202ENST00000375360 AKNAD1Q5T1N1 836 aa20.53■□□□□ 0.88
PTPDC1-202ENST00000375360 OSBPL3Q9H4L5 887 aa20.53■□□□□ 0.88
PTPDC1-202ENST00000375360 DNA2P51530 1060 aa20.53■□□□□ 0.88
PTPDC1-202ENST00000375360 ERFEQ4G0M1 354 aa20.53■□□□□ 0.88
PTPDC1-202ENST00000375360 TRIM47Q96LD4 638 aa20.53■□□□□ 0.88
PTPDC1-202ENST00000375360 ATG3Q9NT62 314 aa20.53■□□□□ 0.88
PTPDC1-202ENST00000375360 BMP15O95972 392 aa20.52■□□□□ 0.88
PTPDC1-202ENST00000375360 BRAPQ7Z569 592 aa20.52■□□□□ 0.88
PTPDC1-202ENST00000375360 TM6SF1Q9BZW5 370 aa20.52■□□□□ 0.88
PTPDC1-202ENST00000375360 TPCN1Q9ULQ1 816 aa20.52■□□□□ 0.88
PTPDC1-202ENST00000375360 KCNJ14Q9UNX9 436 aa20.52■□□□□ 0.88
PTPDC1-202ENST00000375360 ARHGEF40Q8TER5 1519 aa20.52■□□□□ 0.88
PTPDC1-202ENST00000375360 VWA3AA6NCI4 1184 aa20.52■□□□□ 0.88
PTPDC1-202ENST00000375360 PATL2C9JE40 543 aaKnown RBP20.52■□□□□ 0.88
PTPDC1-202ENST00000375360 GADD45BO75293 160 aaPredicted RBP20.52■□□□□ 0.88
PTPDC1-202ENST00000375360 PARP1P09874 1014 aaKnown RBP20.52■□□□□ 0.88
PTPDC1-202ENST00000375360 CCDC181Q5TID7 509 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms