RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 NPAS4Q8IUM7 802 aa9.19□□□□□ -0.94
USP48-203ENST00000374732 APPL2Q8NEU8 664 aa9.19□□□□□ -0.94
USP48-203ENST00000374732 POGKQ9P215 609 aa9.19□□□□□ -0.94
USP48-203ENST00000374732 KIF1BO60333 1816 aa9.19□□□□□ -0.94
USP48-203ENST00000374732 IFT172Q9UG01 1749 aa9.19□□□□□ -0.94
USP48-203ENST00000374732 NOS1P29475 1434 aa9.19□□□□□ -0.94
USP48-203ENST00000374732 RAD50Q92878 1312 aa9.19□□□□□ -0.94
USP48-203ENST00000374732 C19orf81C9J6K1 198 aa9.18□□□□□ -0.94
USP48-203ENST00000374732 SLFN14P0C7P3 912 aa9.18□□□□□ -0.94
USP48-203ENST00000374732 PIP4K2BP78356 416 aa9.18□□□□□ -0.94
USP48-203ENST00000374732 TMED1Q13445 227 aa9.18□□□□□ -0.94
USP48-203ENST00000374732 MAPRE1Q15691 268 aaKnown RBP9.18□□□□□ -0.94
USP48-203ENST00000374732 RBM12BQ8IXT5 1001 aaKnown RBP9.18□□□□□ -0.94
USP48-203ENST00000374732 MRFAP1L1Q96HT8 127 aa9.18□□□□□ -0.94
USP48-203ENST00000374732 RMDN2Q96LZ7 410 aa9.18□□□□□ -0.94
USP48-203ENST00000374732 TRIM7Q9C029 511 aa9.18□□□□□ -0.94
USP48-203ENST00000374732 PTPRHQ9HD43 1115 aa9.18□□□□□ -0.94
USP48-203ENST00000374732 AVENQ9NQS1 362 aaPredicted RBP9.18□□□□□ -0.94
USP48-203ENST00000374732 NEBLO76041 1014 aa9.18□□□□□ -0.94
USP48-203ENST00000374732 INMTO95050 263 aa9.18□□□□□ -0.94
USP48-203ENST00000374732 TMF1P82094 1093 aa9.18□□□□□ -0.94
USP48-203ENST00000374732 PDCD2Q16342 344 aaPredicted RBP9.18□□□□□ -0.94
USP48-203ENST00000374732 ZNF713Q8N859 430 aaPredicted RBP9.18□□□□□ -0.94
USP48-203ENST00000374732 LMCD1Q9NZU5 365 aa9.18□□□□□ -0.94
USP48-203ENST00000374732 DISP3Q9P2K9 1392 aa9.18□□□□□ -0.94
USP48-203ENST00000374732 EIF3FO00303 357 aaPredicted RBP9.18□□□□□ -0.94
USP48-203ENST00000374732 Q3C1V9 767 aa9.18□□□□□ -0.94
USP48-203ENST00000374732 CFAP58Q5T655 872 aa9.18□□□□□ -0.94
USP48-203ENST00000374732 ACBD5Q5T8D3 534 aaPredicted RBP9.18□□□□□ -0.94
USP48-203ENST00000374732 PODNQ7Z5L7 613 aa9.18□□□□□ -0.94
USP48-203ENST00000374732 DRAXINQ8NBI3 349 aaPredicted RBP9.18□□□□□ -0.94
USP48-203ENST00000374732 UIMC1Q96RL1 719 aa9.18□□□□□ -0.94
USP48-203ENST00000374732 PPP4R2Q9NY27 417 aa9.18□□□□□ -0.94
USP48-203ENST00000374732 POLG2Q9UHN1 485 aa9.18□□□□□ -0.94
USP48-203ENST00000374732 EIF2B5Q13144 721 aaKnown RBP9.17□□□□□ -0.94
USP48-203ENST00000374732 DBN1Q16643 649 aa9.17□□□□□ -0.94
USP48-203ENST00000374732 ESCO1Q5FWF5 840 aa9.17□□□□□ -0.94
USP48-203ENST00000374732 OLFML1Q6UWY5 402 aa9.17□□□□□ -0.94
USP48-203ENST00000374732 DZIP1Q86YF9 867 aaKnown RBP9.17□□□□□ -0.94
USP48-203ENST00000374732 FRS2Q8WU20 508 aa9.17□□□□□ -0.94
USP48-203ENST00000374732 SH3GL3Q99963 347 aa9.17□□□□□ -0.94
USP48-203ENST00000374732 GPCPD1Q9NPB8 672 aa9.17□□□□□ -0.94
USP48-203ENST00000374732 CLIP2Q9UDT6 1046 aa9.17□□□□□ -0.94
USP48-203ENST00000374732 MORC2Q9Y6X9 1032 aaPredicted RBP9.17□□□□□ -0.94
USP48-203ENST00000374732 NRXN1Q9ULB1 1477 aa9.17□□□□□ -0.94
USP48-203ENST00000374732 CHD2O14647 1828 aaKnown RBP9.17□□□□□ -0.94
USP48-203ENST00000374732 PARP9Q8IXQ6 854 aa9.17□□□□□ -0.94
USP48-203ENST00000374732 LILRB2Q8N423 598 aa9.17□□□□□ -0.94
USP48-203ENST00000374732 DIAPH3Q9NSV4 1193 aa9.17□□□□□ -0.94
USP48-203ENST00000374732 SETD1AO15047 1707 aaKnown RBP9.17□□□□□ -0.94
USP48-203ENST00000374732 KIF3BO15066 747 aa9.16□□□□□ -0.94
USP48-203ENST00000374732 AP1G2O75843 785 aa9.16□□□□□ -0.94
USP48-203ENST00000374732 NFX1Q12986 1120 aaKnown RBP9.16□□□□□ -0.94
USP48-203ENST00000374732 CBLBQ13191 982 aa9.16□□□□□ -0.94
USP48-203ENST00000374732 PARP10Q53GL7 1025 aa9.16□□□□□ -0.94
USP48-203ENST00000374732 VPS52Q8N1B4 723 aa9.16□□□□□ -0.94
USP48-203ENST00000374732 SPC24Q8NBT2 197 aa9.16□□□□□ -0.94
USP48-203ENST00000374732 GSDMBQ8TAX9 411 aa9.16□□□□□ -0.94
USP48-203ENST00000374732 ANKRD24Q8TF21 1146 aa9.16□□□□□ -0.94
USP48-203ENST00000374732 GSDMAQ96QA5 445 aa9.16□□□□□ -0.94
USP48-203ENST00000374732 MTRQ99707 1265 aa9.16□□□□□ -0.94
USP48-203ENST00000374732 RBSNQ9H1K0 784 aa9.16□□□□□ -0.94
USP48-203ENST00000374732 RABGAP1Q9Y3P9 1069 aa9.16□□□□□ -0.94
USP48-203ENST00000374732 ZSCAN9O15535 394 aaPredicted RBP9.16□□□□□ -0.94
USP48-203ENST00000374732 PYGLP06737 847 aa9.16□□□□□ -0.94
USP48-203ENST00000374732 HSD17B7P56937 341 aa9.16□□□□□ -0.94
USP48-203ENST00000374732 FAXDC2Q96IV6 333 aa9.16□□□□□ -0.94
USP48-203ENST00000374732 UROC1Q96N76 676 aa9.16□□□□□ -0.94
USP48-203ENST00000374732 SNX16P57768 344 aa9.15□□□□□ -0.94
USP48-203ENST00000374732 TSGA10IPQ3SY00 556 aa9.15□□□□□ -0.94
USP48-203ENST00000374732 ANKLE2Q86XL3 938 aa9.15□□□□□ -0.94
USP48-203ENST00000374732 CCDC102AQ96A19 550 aa9.15□□□□□ -0.94
USP48-203ENST00000374732 EIF3AQ14152 1382 aaKnown RBP9.15□□□□□ -0.94
USP48-203ENST00000374732 A0A1W2PRQ8 180 aa9.15□□□□□ -0.94
USP48-203ENST00000374732 CCDC159P0C7I6 412 aa9.15□□□□□ -0.94
USP48-203ENST00000374732 GNAT2P19087 354 aa9.15□□□□□ -0.94
USP48-203ENST00000374732 IQCEQ6IPM2 695 aa9.15□□□□□ -0.94
USP48-203ENST00000374732 USP48Q86UV5 1035 aa9.15□□□□□ -0.94
USP48-203ENST00000374732 SENP2Q9HC62 589 aa9.15□□□□□ -0.94
USP48-203ENST00000374732 OGFRQ9NZT2 677 aa9.15□□□□□ -0.94
USP48-203ENST00000374732 SETBP1Q9Y6X0 1596 aa9.15□□□□□ -0.95
USP48-203ENST00000374732 SGTAO43765 313 aa9.15□□□□□ -0.95
USP48-203ENST00000374732 POLR2FP61218 127 aaKnown RBP9.15□□□□□ -0.95
USP48-203ENST00000374732 TAF1CQ15572 869 aaPredicted RBP9.15□□□□□ -0.95
USP48-203ENST00000374732 SLC5A9Q2M3M2 681 aa9.15□□□□□ -0.95
USP48-203ENST00000374732 FILIP1LQ4L180 1135 aa9.15□□□□□ -0.95
USP48-203ENST00000374732 EFCAB13Q8IY85 973 aa9.15□□□□□ -0.95
USP48-203ENST00000374732 WDR66Q8TBY9 1149 aa9.15□□□□□ -0.95
USP48-203ENST00000374732 KCNN1Q92952 543 aa9.15□□□□□ -0.95
USP48-203ENST00000374732 FBXL5Q9UKA1 691 aa9.15□□□□□ -0.95
USP48-203ENST00000374732 RNF123Q5XPI4 1314 aa9.15□□□□□ -0.95
USP48-203ENST00000374732 NINLQ9Y2I6 1382 aa9.15□□□□□ -0.95
USP48-203ENST00000374732 A0A0B4J203 849 aa9.14□□□□□ -0.95
USP48-203ENST00000374732 MYL1P05976 194 aa9.14□□□□□ -0.95
USP48-203ENST00000374732 GNALP38405 381 aa9.14□□□□□ -0.95
USP48-203ENST00000374732 BPIFB3P59826 476 aa9.14□□□□□ -0.95
USP48-203ENST00000374732 FIP1L1Q6UN15 594 aaKnown RBP9.14□□□□□ -0.95
USP48-203ENST00000374732 SH3TC2Q8TF17 1288 aa9.14□□□□□ -0.95
USP48-203ENST00000374732 PRKAG2Q9UGJ0 569 aa9.14□□□□□ -0.95
USP48-203ENST00000374732 POM121CA8CG34 1229 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms