RNA–Protein interactions for RNA: ENST00000374257.5

PTBP3-205, Transcript of polypyrimidine tract binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PTBP3, Length 7,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-205ENST00000374257 TRPM1Q7Z4N2 1603 aa9.63□□□□□ -0.87
PTBP3-205ENST00000374257 BTDP43251 543 aa9.63□□□□□ -0.87
PTBP3-205ENST00000374257 POTEAQ6S8J7 498 aa9.63□□□□□ -0.87
PTBP3-205ENST00000374257 LINC00116Q8NCU8 138 aa9.63□□□□□ -0.87
PTBP3-205ENST00000374257 COPRSQ9NQ92 184 aa9.63□□□□□ -0.87
PTBP3-205ENST00000374257 DPEP1P16444 411 aa9.63□□□□□ -0.87
PTBP3-205ENST00000374257 ZAP70P43403 619 aa9.63□□□□□ -0.87
PTBP3-205ENST00000374257 NKX1-1Q15270 411 aaPredicted RBP9.63□□□□□ -0.87
PTBP3-205ENST00000374257 RTN1Q16799 776 aa9.63□□□□□ -0.87
PTBP3-205ENST00000374257 SASS6Q6UVJ0 657 aa9.63□□□□□ -0.87
PTBP3-205ENST00000374257 SP8Q8IXZ3 490 aa9.63□□□□□ -0.87
PTBP3-205ENST00000374257 PLEKHG2Q9H7P9 1386 aa9.63□□□□□ -0.87
PTBP3-205ENST00000374257 CCDC171Q6TFL3 1326 aa9.62□□□□□ -0.87
PTBP3-205ENST00000374257 KLF18A0A0U1RQI7 1052 aa9.62□□□□□ -0.87
PTBP3-205ENST00000374257 NUCB1Q02818 461 aa9.62□□□□□ -0.87
PTBP3-205ENST00000374257 GOPCQ9HD26 462 aa9.62□□□□□ -0.87
PTBP3-205ENST00000374257 WDR33Q9C0J8 1336 aaKnown RBP9.62□□□□□ -0.87
PTBP3-205ENST00000374257 CIAO1O76071 339 aa9.62□□□□□ -0.87
PTBP3-205ENST00000374257 PARP1P09874 1014 aaKnown RBP9.62□□□□□ -0.87
PTBP3-205ENST00000374257 CCDC144CPQ8IYA2 1237 aa9.62□□□□□ -0.87
PTBP3-205ENST00000374257 PAGR1Q9BTK6 254 aa9.62□□□□□ -0.87
PTBP3-205ENST00000374257 NAPAP54920 295 aa9.62□□□□□ -0.87
PTBP3-205ENST00000374257 PRR5LQ6MZQ0 368 aa9.62□□□□□ -0.87
PTBP3-205ENST00000374257 BCORL1Q5H9F3 1711 aa9.62□□□□□ -0.87
PTBP3-205ENST00000374257 TBC1D9Q6ZT07 1266 aa9.62□□□□□ -0.87
PTBP3-205ENST00000374257 CRAMP1Q96RY5 1269 aa9.62□□□□□ -0.87
PTBP3-205ENST00000374257 C6orf50Q9HD87 102 aa9.62□□□□□ -0.87
PTBP3-205ENST00000374257 RLBP1P12271 317 aa9.62□□□□□ -0.87
PTBP3-205ENST00000374257 PDE4CQ08493 712 aa9.62□□□□□ -0.87
PTBP3-205ENST00000374257 LRRC24Q50LG9 513 aa9.62□□□□□ -0.87
PTBP3-205ENST00000374257 KBTBD3Q8NAB2 608 aa9.62□□□□□ -0.87
PTBP3-205ENST00000374257 SDSP20132 328 aa9.62□□□□□ -0.87
PTBP3-205ENST00000374257 KRT85P78386 507 aa9.62□□□□□ -0.87
PTBP3-205ENST00000374257 TRMT1LQ7Z2T5 733 aaKnown RBP9.62□□□□□ -0.87
PTBP3-205ENST00000374257 TTLL11Q8NHH1 800 aa9.62□□□□□ -0.87
PTBP3-205ENST00000374257 CCDC39Q9UFE4 941 aa9.62□□□□□ -0.87
PTBP3-205ENST00000374257 CFAP45Q9UL16 551 aa9.62□□□□□ -0.87
PTBP3-205ENST00000374257 PNMA2Q9UL42 364 aa9.62□□□□□ -0.87
PTBP3-205ENST00000374257 TBC1D10BQ4KMP7 808 aaPredicted RBP9.61□□□□□ -0.87
PTBP3-205ENST00000374257 CT47A1Q5JQC4 288 aaPredicted RBP9.61□□□□□ -0.87
PTBP3-205ENST00000374257 ERMNQ8TAM6 284 aa9.61□□□□□ -0.87
PTBP3-205ENST00000374257 CHURC1Q8WUH1 139 aa9.61□□□□□ -0.87
PTBP3-205ENST00000374257 SLC26A6Q9BXS9 759 aa9.61□□□□□ -0.87
PTBP3-205ENST00000374257 TNNQ9UQP3 1299 aa9.61□□□□□ -0.87
PTBP3-205ENST00000374257 PCDHB15Q9Y5E8 787 aa9.61□□□□□ -0.87
PTBP3-205ENST00000374257 RBM8AQ9Y5S9 174 aaKnown RBP9.61□□□□□ -0.87
PTBP3-205ENST00000374257 CCT2P78371 535 aaKnown RBP9.61□□□□□ -0.87
PTBP3-205ENST00000374257 HEATR3Q7Z4Q2 680 aa9.61□□□□□ -0.87
PTBP3-205ENST00000374257 CPXCR1Q8N123 301 aa9.61□□□□□ -0.87
PTBP3-205ENST00000374257 TNPO1Q92973 898 aaKnown RBP9.61□□□□□ -0.87
PTBP3-205ENST00000374257 BRF1Q92994 677 aa9.61□□□□□ -0.87
PTBP3-205ENST00000374257 CSRNP1Q96S65 589 aa9.61□□□□□ -0.87
PTBP3-205ENST00000374257 ARPP21Q9UBL0 812 aaPredicted RBP9.61□□□□□ -0.87
PTBP3-205ENST00000374257 HACL1Q9UJ83 578 aa9.61□□□□□ -0.87
PTBP3-205ENST00000374257 ZNRF3Q9ULT6 936 aa9.61□□□□□ -0.87
PTBP3-205ENST00000374257 RICTORQ6R327 1708 aa9.61□□□□□ -0.87
PTBP3-205ENST00000374257 COL23A1Q86Y22 540 aaPredicted RBP9.61□□□□□ -0.87
PTBP3-205ENST00000374257 PAF1Q8N7H5 531 aa9.61□□□□□ -0.87
PTBP3-205ENST00000374257 ORC3Q9UBD5 711 aaPredicted RBP9.61□□□□□ -0.87
PTBP3-205ENST00000374257 TGFB2P61812 414 aa9.61□□□□□ -0.87
PTBP3-205ENST00000374257 NSMFQ6X4W1 530 aa9.61□□□□□ -0.87
PTBP3-205ENST00000374257 KRT26Q7Z3Y9 468 aa9.61□□□□□ -0.87
PTBP3-205ENST00000374257 PRC1O43663 620 aa9.61□□□□□ -0.87
PTBP3-205ENST00000374257 ITPK1Q13572 414 aa9.61□□□□□ -0.87
PTBP3-205ENST00000374257 ZNF532Q9HCE3 1301 aa9.61□□□□□ -0.87
PTBP3-205ENST00000374257 GPAA1O43292 621 aa9.61□□□□□ -0.87
PTBP3-205ENST00000374257 CCDC83Q8IWF9 413 aa9.61□□□□□ -0.87
PTBP3-205ENST00000374257 PDCL3Q9H2J4 239 aa9.61□□□□□ -0.87
PTBP3-205ENST00000374257 LIMCH1Q9UPQ0 1083 aa9.61□□□□□ -0.87
PTBP3-205ENST00000374257 ECE2O60344 883 aa9.6□□□□□ -0.87
PTBP3-205ENST00000374257 ZNF853P0CG23 659 aa9.6□□□□□ -0.87
PTBP3-205ENST00000374257 PNMA6EA0A0J9YXQ4 647 aa9.6□□□□□ -0.87
PTBP3-205ENST00000374257 FIBPO43427 364 aa9.6□□□□□ -0.87
PTBP3-205ENST00000374257 PRDM1O75626 825 aa9.6□□□□□ -0.87
PTBP3-205ENST00000374257 IL27Q8NEV9 243 aa9.6□□□□□ -0.87
PTBP3-205ENST00000374257 GPR108Q9NPR9 543 aa9.6□□□□□ -0.87
PTBP3-205ENST00000374257 SSH3Q8TE77 659 aa9.6□□□□□ -0.87
PTBP3-205ENST00000374257 NAT10Q9H0A0 1025 aaKnown RBP9.6□□□□□ -0.87
PTBP3-205ENST00000374257 TCP11L1Q9NUJ3 509 aa9.6□□□□□ -0.87
PTBP3-205ENST00000374257 USP42Q9H9J4 1324 aaKnown RBP9.6□□□□□ -0.87
PTBP3-205ENST00000374257 H7C1W4 665 aa9.6□□□□□ -0.87
PTBP3-205ENST00000374257 AOC3Q16853 763 aa9.6□□□□□ -0.87
PTBP3-205ENST00000374257 PUS3Q9BZE2 481 aaKnown RBP9.6□□□□□ -0.87
PTBP3-205ENST00000374257 MAGEC2Q9UBF1 373 aaPredicted RBP9.6□□□□□ -0.87
PTBP3-205ENST00000374257 CERKLQ49MI3 558 aaPredicted RBP9.6□□□□□ -0.87
PTBP3-205ENST00000374257 STYK1Q6J9G0 422 aa9.6□□□□□ -0.87
PTBP3-205ENST00000374257 IBTKQ9P2D0 1353 aaPredicted RBP9.6□□□□□ -0.87
PTBP3-205ENST00000374257 OSBPP22059 807 aa9.59□□□□□ -0.87
PTBP3-205ENST00000374257 GNA11P29992 359 aa9.59□□□□□ -0.87
PTBP3-205ENST00000374257 USP14P54578 494 aa9.59□□□□□ -0.87
PTBP3-205ENST00000374257 PNMA8AQ86V59 439 aaPredicted RBP9.59□□□□□ -0.87
PTBP3-205ENST00000374257 GPCPD1Q9NPB8 672 aa9.59□□□□□ -0.87
PTBP3-205ENST00000374257 ATP10DQ9P241 1426 aa9.59□□□□□ -0.87
PTBP3-205ENST00000374257 ATP5JP18859 108 aa9.59□□□□□ -0.87
PTBP3-205ENST00000374257 LMNB1P20700 586 aa9.59□□□□□ -0.87
PTBP3-205ENST00000374257 RAB11FIP4Q86YS3 637 aa9.59□□□□□ -0.87
PTBP3-205ENST00000374257 CDHR2Q9BYE9 1310 aa9.59□□□□□ -0.87
PTBP3-205ENST00000374257 APOBEC3FQ8IUX4 373 aaKnown RBP9.59□□□□□ -0.87
PTBP3-205ENST00000374257 CEP57L1Q8IYX8 460 aa9.59□□□□□ -0.87
PTBP3-205ENST00000374257 CCDC17Q96LX7 622 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms