RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 RRP36Q96EU6 259 aaKnown RBP16.2■□□□□ 0.18
TRAF1-201ENST00000373887 SPDYE3A6NKU9 549 aa16.2■□□□□ 0.18
TRAF1-201ENST00000373887 SYKP43405 635 aa16.2■□□□□ 0.18
TRAF1-201ENST00000373887 KANK3Q6NY19 840 aa16.2■□□□□ 0.18
TRAF1-201ENST00000373887 KRT222Q8N1A0 295 aa16.2■□□□□ 0.18
TRAF1-201ENST00000373887 GGA1Q9UJY5 639 aa16.2■□□□□ 0.18
TRAF1-201ENST00000373887 APOBRQ0VD83 1088 aa16.2■□□□□ 0.18
TRAF1-201ENST00000373887 ANKRD44Q8N8A2 993 aa16.2■□□□□ 0.18
TRAF1-201ENST00000373887 LRRC45Q96CN5 670 aa16.2■□□□□ 0.18
TRAF1-201ENST00000373887 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.2■□□□□ 0.18
TRAF1-201ENST00000373887 TCHPQ9BT92 498 aa16.2■□□□□ 0.18
TRAF1-201ENST00000373887 CCDC129Q6ZRS4 1044 aa16.19■□□□□ 0.18
TRAF1-201ENST00000373887 DNAJC10Q8IXB1 793 aa16.19■□□□□ 0.18
TRAF1-201ENST00000373887 BCS1LQ9Y276 419 aa16.19■□□□□ 0.18
TRAF1-201ENST00000373887 CCDC172P0C7W6 258 aa16.19■□□□□ 0.18
TRAF1-201ENST00000373887 GPR162Q16538 588 aa16.19■□□□□ 0.18
TRAF1-201ENST00000373887 ERMNQ8TAM6 284 aa16.19■□□□□ 0.18
TRAF1-201ENST00000373887 SH3BP5O60239 455 aa16.19■□□□□ 0.18
TRAF1-201ENST00000373887 NOL3O60936 208 aaKnown RBP16.19■□□□□ 0.18
TRAF1-201ENST00000373887 UIMC1Q96RL1 719 aa16.19■□□□□ 0.18
TRAF1-201ENST00000373887 CYLC1P35663 651 aaPredicted RBP16.19■□□□□ 0.18
TRAF1-201ENST00000373887 DDX12PQ92771 950 aa16.19■□□□□ 0.18
TRAF1-201ENST00000373887 CCDC87Q9NVE4 849 aa16.19■□□□□ 0.18
TRAF1-201ENST00000373887 CCDC121Q6ZUS5 278 aa16.18■□□□□ 0.18
TRAF1-201ENST00000373887 ESYT1Q9BSJ8 1104 aa16.18■□□□□ 0.18
TRAF1-201ENST00000373887 ARMT1Q9H993 441 aa16.18■□□□□ 0.18
TRAF1-201ENST00000373887 VAMP4O75379 141 aa16.18■□□□□ 0.18
TRAF1-201ENST00000373887 HIBADHP31937 336 aaKnown RBP16.18■□□□□ 0.18
TRAF1-201ENST00000373887 PLVAPQ9BX97 442 aa16.18■□□□□ 0.18
TRAF1-201ENST00000373887 PICK1Q9NRD5 415 aa16.18■□□□□ 0.18
TRAF1-201ENST00000373887 CCDC171Q6TFL3 1326 aa16.18■□□□□ 0.18
TRAF1-201ENST00000373887 ANKS4BQ8N8V4 417 aa16.18■□□□□ 0.18
TRAF1-201ENST00000373887 RMND1Q9NWS8 449 aa16.18■□□□□ 0.18
TRAF1-201ENST00000373887 NBPF7P0C2Y1 421 aaPredicted RBP16.18■□□□□ 0.18
TRAF1-201ENST00000373887 ARFGAP3Q9NP61 516 aa16.18■□□□□ 0.18
TRAF1-201ENST00000373887 MCM7P33993 719 aa16.18■□□□□ 0.18
TRAF1-201ENST00000373887 UBE2HP62256 183 aa16.18■□□□□ 0.18
TRAF1-201ENST00000373887 PLCB3Q01970 1234 aa16.18■□□□□ 0.18
TRAF1-201ENST00000373887 NDUFB9Q9Y6M9 179 aa16.18■□□□□ 0.18
TRAF1-201ENST00000373887 CLGNO14967 610 aa16.17■□□□□ 0.18
TRAF1-201ENST00000373887 ARHGAP45Q92619 1136 aa16.17■□□□□ 0.18
TRAF1-201ENST00000373887 CNPY2Q9Y2B0 182 aa16.17■□□□□ 0.18
TRAF1-201ENST00000373887 CEP85Q6P2H3 762 aa16.17■□□□□ 0.18
TRAF1-201ENST00000373887 DYNC1I1O14576 645 aa16.17■□□□□ 0.18
TRAF1-201ENST00000373887 CCDC25Q86WR0 208 aa16.17■□□□□ 0.18
TRAF1-201ENST00000373887 RPUSD2Q8IZ73 545 aaKnown RBP16.17■□□□□ 0.18
TRAF1-201ENST00000373887 FNBP4Q8N3X1 1017 aaPredicted RBP16.17■□□□□ 0.18
TRAF1-201ENST00000373887 TMX3Q96JJ7 454 aa16.17■□□□□ 0.18
TRAF1-201ENST00000373887 SLC52A2Q9HAB3 445 aa16.17■□□□□ 0.18
TRAF1-201ENST00000373887 PLCG2P16885 1265 aa16.17■□□□□ 0.18
TRAF1-201ENST00000373887 BAG6P46379 1132 aa16.17■□□□□ 0.18
TRAF1-201ENST00000373887 LRRC27Q9C0I9 530 aa16.17■□□□□ 0.18
TRAF1-201ENST00000373887 KCNK9Q9NPC2 374 aa16.17■□□□□ 0.18
TRAF1-201ENST00000373887 AATFQ9NY61 560 aaKnown RBP eCLIP16.17■□□□□ 0.18
TRAF1-201ENST00000373887 SKILP12757 684 aa16.17■□□□□ 0.18
TRAF1-201ENST00000373887 PYM1Q9BRP8 204 aaKnown RBP16.17■□□□□ 0.18
TRAF1-201ENST00000373887 CDCA7Q9BWT1 371 aaPredicted RBP16.17■□□□□ 0.18
TRAF1-201ENST00000373887 ZEB2O60315 1214 aa16.16■□□□□ 0.18
TRAF1-201ENST00000373887 AOPEPQ8N6M6 819 aa16.16■□□□□ 0.18
TRAF1-201ENST00000373887 VPS18Q9P253 973 aa16.16■□□□□ 0.18
TRAF1-201ENST00000373887 ODF2LQ9ULJ1 636 aa16.16■□□□□ 0.18
TRAF1-201ENST00000373887 OPA1O60313 960 aa16.16■□□□□ 0.18
TRAF1-201ENST00000373887 PLBD2Q8NHP8 589 aa16.16■□□□□ 0.18
TRAF1-201ENST00000373887 CCDC77Q9BR77 488 aa16.16■□□□□ 0.18
TRAF1-201ENST00000373887 CEP83Q9Y592 693 aa16.16■□□□□ 0.18
TRAF1-201ENST00000373887 IFT81Q8WYA0 676 aa16.16■□□□□ 0.18
TRAF1-201ENST00000373887 TTC12Q9H892 705 aaPredicted RBP16.16■□□□□ 0.18
TRAF1-201ENST00000373887 A0A1B0GUL7 405 aa16.16■□□□□ 0.18
TRAF1-201ENST00000373887 BACH1O14867 736 aa16.16■□□□□ 0.18
TRAF1-201ENST00000373887 C6orf50Q9HD87 102 aa16.16■□□□□ 0.18
TRAF1-201ENST00000373887 TMCO4Q5TGY1 634 aa16.15■□□□□ 0.18
TRAF1-201ENST00000373887 TMTC2Q8N394 836 aa16.15■□□□□ 0.18
TRAF1-201ENST00000373887 SMC1BQ8NDV3 1235 aa16.15■□□□□ 0.18
TRAF1-201ENST00000373887 DENND2AQ9ULE3 1009 aa16.15■□□□□ 0.18
TRAF1-201ENST00000373887 SH3TC1Q8TE82 1336 aa16.15■□□□□ 0.18
TRAF1-201ENST00000373887 IVLP07476 585 aa16.15■□□□□ 0.18
TRAF1-201ENST00000373887 CAPN2P17655 700 aa16.15■□□□□ 0.18
TRAF1-201ENST00000373887 LTKP29376 864 aa16.15■□□□□ 0.18
TRAF1-201ENST00000373887 FAM160A1Q05DH4 1040 aa16.15■□□□□ 0.18
TRAF1-201ENST00000373887 SEPT6Q14141 434 aa16.15■□□□□ 0.18
TRAF1-201ENST00000373887 KARSQ15046 597 aaKnown RBP16.15■□□□□ 0.18
TRAF1-201ENST00000373887 DDX21Q9NR30 783 aaKnown RBP eCLIP16.15■□□□□ 0.18
TRAF1-201ENST00000373887 RLBP1P12271 317 aa16.15■□□□□ 0.18
TRAF1-201ENST00000373887 DHX58Q96C10 678 aa16.15■□□□□ 0.18
TRAF1-201ENST00000373887 SEC62Q99442 399 aaKnown RBP16.15■□□□□ 0.18
TRAF1-201ENST00000373887 PBRM1Q86U86 1689 aa16.15■□□□□ 0.18
TRAF1-201ENST00000373887 CHMP2AO43633 222 aa16.15■□□□□ 0.18
TRAF1-201ENST00000373887 NAA25Q14CX7 972 aa16.14■□□□□ 0.18
TRAF1-201ENST00000373887 TMOD4Q9NZQ9 345 aa16.14■□□□□ 0.18
TRAF1-201ENST00000373887 ATP7AQ04656 1500 aa16.14■□□□□ 0.17
TRAF1-201ENST00000373887 TLDC2A0PJX2 215 aa16.14■□□□□ 0.17
TRAF1-201ENST00000373887 CTAGE9A4FU28 777 aa16.14■□□□□ 0.17
TRAF1-201ENST00000373887 ASIC1P78348 528 aa16.14■□□□□ 0.17
TRAF1-201ENST00000373887 FCHSD1Q86WN1 690 aa16.14■□□□□ 0.17
TRAF1-201ENST00000373887 EIF2AK4Q9P2K8 1649 aaKnown RBP16.14■□□□□ 0.17
TRAF1-201ENST00000373887 TACC1O75410 805 aa16.14■□□□□ 0.17
TRAF1-201ENST00000373887 PRDM1O75626 825 aa16.14■□□□□ 0.17
TRAF1-201ENST00000373887 GNAT2P19087 354 aa16.14■□□□□ 0.17
TRAF1-201ENST00000373887 CCDC186Q7Z3E2 898 aa16.14■□□□□ 0.17
TRAF1-201ENST00000373887 CTAGE1Q96RT6 745 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms