RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 LRP2BPQ9P2M1 347 aa23.12■■□□□ 1.29
HDAC1-201ENST00000373548 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.12■■□□□ 1.29
HDAC1-201ENST00000373548 DNM1Q05193 864 aaKnown RBP23.12■■□□□ 1.29
HDAC1-201ENST00000373548 RALYLQ86SE5 291 aaKnown RBP23.12■■□□□ 1.29
HDAC1-201ENST00000373548 FAM84BQ96KN1 310 aaPredicted RBP23.12■■□□□ 1.29
HDAC1-201ENST00000373548 EPB41L4AQ9HCS5 686 aaPredicted RBP23.12■■□□□ 1.29
HDAC1-201ENST00000373548 ZMYM6O95789 1325 aa23.12■■□□□ 1.29
HDAC1-201ENST00000373548 CTDNEP1O95476 244 aa23.11■■□□□ 1.29
HDAC1-201ENST00000373548 CAVIN4Q5BKX8 364 aa23.11■■□□□ 1.29
HDAC1-201ENST00000373548 KRT27Q7Z3Y8 459 aa23.11■■□□□ 1.29
HDAC1-201ENST00000373548 NSUN7Q8NE18 718 aaKnown RBP23.11■■□□□ 1.29
HDAC1-201ENST00000373548 PATL2C9JE40 543 aaKnown RBP23.11■■□□□ 1.29
HDAC1-201ENST00000373548 CCT2P78371 535 aaKnown RBP23.11■■□□□ 1.29
HDAC1-201ENST00000373548 WDR19Q8NEZ3 1342 aa23.11■■□□□ 1.29
HDAC1-201ENST00000373548 CHD4Q14839 1912 aa23.11■■□□□ 1.29
HDAC1-201ENST00000373548 NPHP1O15259 732 aa23.1■■□□□ 1.29
HDAC1-201ENST00000373548 FERMT3Q86UX7 667 aa23.1■■□□□ 1.29
HDAC1-201ENST00000373548 DDX11Q96FC9 970 aa23.1■■□□□ 1.29
HDAC1-201ENST00000373548 DENND2AQ9ULE3 1009 aa23.1■■□□□ 1.29
HDAC1-201ENST00000373548 MYH13Q9UKX3 1938 aa23.1■■□□□ 1.29
HDAC1-201ENST00000373548 PNPLA7Q6ZV29 1317 aa23.09■■□□□ 1.29
HDAC1-201ENST00000373548 FIBPO43427 364 aa23.09■■□□□ 1.29
HDAC1-201ENST00000373548 KLRK1P26718 216 aa23.09■■□□□ 1.29
HDAC1-201ENST00000373548 FBXO33Q7Z6M2 555 aa23.09■■□□□ 1.29
HDAC1-201ENST00000373548 IFNL3Q8IZI9 196 aa23.09■■□□□ 1.29
HDAC1-201ENST00000373548 LCORLQ8N3X6 602 aa23.09■■□□□ 1.29
HDAC1-201ENST00000373548 PANK2Q9BZ23 570 aa23.09■■□□□ 1.29
HDAC1-201ENST00000373548 ANKRD2Q9GZV1 360 aa23.09■■□□□ 1.29
HDAC1-201ENST00000373548 NCOA5Q9HCD5 579 aaKnown RBP23.09■■□□□ 1.29
HDAC1-201ENST00000373548 NAP1L2Q9ULW6 460 aaPredicted RBP23.09■■□□□ 1.29
HDAC1-201ENST00000373548 CACNA1SQ13698 1873 aa23.09■■□□□ 1.29
HDAC1-201ENST00000373548 TRIM37O94972 964 aa23.09■■□□□ 1.29
HDAC1-201ENST00000373548 SLC27A3Q5K4L6 730 aa23.09■■□□□ 1.29
HDAC1-201ENST00000373548 VPS37DQ86XT2 251 aa23.09■■□□□ 1.29
HDAC1-201ENST00000373548 GSG1L2A8MUP6 293 aa23.08■■□□□ 1.29
HDAC1-201ENST00000373548 CNBD1Q8NA66 436 aa23.08■■□□□ 1.29
HDAC1-201ENST00000373548 NKX2-3Q8TAU0 364 aa23.08■■□□□ 1.29
HDAC1-201ENST00000373548 ABCF2Q9UG63 623 aa23.08■■□□□ 1.29
HDAC1-201ENST00000373548 PTPDC1A2A3K4 754 aa23.08■■□□□ 1.28
HDAC1-201ENST00000373548 TRDNQ13061 729 aa23.08■■□□□ 1.28
HDAC1-201ENST00000373548 NAPBQ9H115 298 aa23.08■■□□□ 1.28
HDAC1-201ENST00000373548 SALL1Q9NSC2 1324 aa23.07■■□□□ 1.28
HDAC1-201ENST00000373548 EP400Q96L91 3159 aa23.07■■□□□ 1.28
HDAC1-201ENST00000373548 PRKAB2O43741 272 aa23.07■■□□□ 1.28
HDAC1-201ENST00000373548 MIGA1Q8NAN2 632 aa23.07■■□□□ 1.28
HDAC1-201ENST00000373548 TIAM2Q8IVF5 1701 aa23.07■■□□□ 1.28
HDAC1-201ENST00000373548 GNAT2P19087 354 aa23.06■■□□□ 1.28
HDAC1-201ENST00000373548 CYP7A1P22680 504 aa23.06■■□□□ 1.28
HDAC1-201ENST00000373548 HMGN5P82970 282 aaKnown RBP23.06■■□□□ 1.28
HDAC1-201ENST00000373548 ADGRA1Q86SQ6 560 aa23.06■■□□□ 1.28
HDAC1-201ENST00000373548 FAM184AQ8NB25 1140 aa23.06■■□□□ 1.28
HDAC1-201ENST00000373548 GYS1P13807 737 aa23.06■■□□□ 1.28
HDAC1-201ENST00000373548 CYB5R4Q7L1T6 521 aa23.06■■□□□ 1.28
HDAC1-201ENST00000373548 RAI14Q9P0K7 980 aa23.06■■□□□ 1.28
HDAC1-201ENST00000373548 NEDD4P46934 1319 aa23.05■■□□□ 1.28
HDAC1-201ENST00000373548 KLF18A0A0U1RQI7 1052 aa23.05■■□□□ 1.28
HDAC1-201ENST00000373548 SEMA3EO15041 775 aa23.05■■□□□ 1.28
HDAC1-201ENST00000373548 UBE2HP62256 183 aa23.05■■□□□ 1.28
HDAC1-201ENST00000373548 PRR5LQ6MZQ0 368 aa23.05■■□□□ 1.28
HDAC1-201ENST00000373548 FAM173BQ6P4H8 233 aa23.05■■□□□ 1.28
HDAC1-201ENST00000373548 SLC4A4Q9Y6R1 1079 aa23.05■■□□□ 1.28
HDAC1-201ENST00000373548 CSPP1Q1MSJ5 1256 aa23.05■■□□□ 1.28
HDAC1-201ENST00000373548 CHMP4CQ96CF2 233 aa23.05■■□□□ 1.28
HDAC1-201ENST00000373548 HPS5Q9UPZ3 1129 aa23.05■■□□□ 1.28
HDAC1-201ENST00000373548 B4E1Z4 1266 aa23.04■■□□□ 1.28
HDAC1-201ENST00000373548 TFCP2L1Q9NZI6 479 aa23.04■■□□□ 1.28
HDAC1-201ENST00000373548 KRT85P78386 507 aa23.03■■□□□ 1.28
HDAC1-201ENST00000373548 GRAPQ13588 217 aa23.03■■□□□ 1.28
HDAC1-201ENST00000373548 GRAPLQ8TC17 118 aaPredicted RBP23.03■■□□□ 1.28
HDAC1-201ENST00000373548 IRS2Q9Y4H2 1338 aa23.03■■□□□ 1.28
HDAC1-201ENST00000373548 SYCE3A1L190 88 aa23.03■■□□□ 1.28
HDAC1-201ENST00000373548 GOLGA8BA8MQT2 603 aa23.03■■□□□ 1.28
HDAC1-201ENST00000373548 H3BQV1 296 aa23.03■■□□□ 1.28
HDAC1-201ENST00000373548 HIBADHP31937 336 aaKnown RBP23.03■■□□□ 1.28
HDAC1-201ENST00000373548 CTDSPL2Q05D32 466 aa23.03■■□□□ 1.28
HDAC1-201ENST00000373548 RESTQ13127 1097 aa23.03■■□□□ 1.28
HDAC1-201ENST00000373548 IFFO2Q5TF58 517 aa23.03■■□□□ 1.28
HDAC1-201ENST00000373548 FBXO41Q8TF61 875 aa23.03■■□□□ 1.28
HDAC1-201ENST00000373548 SYAP1Q96A49 352 aaPredicted RBP23.03■■□□□ 1.28
HDAC1-201ENST00000373548 NACAP1Q9BZK3 213 aa23.03■■□□□ 1.28
HDAC1-201ENST00000373548 INCENPQ9NQS7 918 aa23.03■■□□□ 1.28
HDAC1-201ENST00000373548 TACC3Q9Y6A5 838 aa23.03■■□□□ 1.28
HDAC1-201ENST00000373548 PDS5AQ29RF7 1337 aaKnown RBP23.03■■□□□ 1.28
HDAC1-201ENST00000373548 ANGEL1Q9UNK9 670 aaKnown RBP23.02■■□□□ 1.28
HDAC1-201ENST00000373548 KIF3AQ9Y496 699 aa23.02■■□□□ 1.28
HDAC1-201ENST00000373548 SH2B2O14492 632 aaPredicted RBP23.02■■□□□ 1.28
HDAC1-201ENST00000373548 TDO2P48775 406 aa23.02■■□□□ 1.28
HDAC1-201ENST00000373548 NAA16Q6N069 864 aaPredicted RBP23.02■■□□□ 1.28
HDAC1-201ENST00000373548 SLC51AQ86UW1 340 aa23.02■■□□□ 1.28
HDAC1-201ENST00000373548 ZNF384Q8TF68 577 aa23.02■■□□□ 1.28
HDAC1-201ENST00000373548 MAGEB6P1A0A0J9YX57 407 aa23.01■■□□□ 1.27
HDAC1-201ENST00000373548 LRSAM1Q6UWE0 723 aa23.01■■□□□ 1.27
HDAC1-201ENST00000373548 TTC6Q86TZ1 520 aa23.01■■□□□ 1.27
HDAC1-201ENST00000373548 TXNRD3Q86VQ6 643 aa23.01■■□□□ 1.27
HDAC1-201ENST00000373548 PROM2Q8N271 834 aa23.01■■□□□ 1.27
HDAC1-201ENST00000373548 RIOK1Q9BRS2 568 aaKnown RBP23.01■■□□□ 1.27
HDAC1-201ENST00000373548 MYH15Q9Y2K3 1946 aa23.01■■□□□ 1.27
HDAC1-201ENST00000373548 PPFIA3O75145 1194 aa23■■□□□ 1.27
HDAC1-201ENST00000373548 FDPSP14324 419 aaKnown RBP23■■□□□ 1.27
HDAC1-201ENST00000373548 AKNAD1Q5T1N1 836 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms