RNA–Protein interactions for RNA: ENST00000373381.8

CSMD2-205, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSMD2, Length 13,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-205ENST00000373381 NONOQ15233 471 aaKnown RBP eCLIP10.18□□□□□ -0.78
CSMD2-205ENST00000373381 POLA1P09884 1462 aaPredicted RBP10.18□□□□□ -0.78
CSMD2-205ENST00000373381 KRT86O43790 486 aa10.17□□□□□ -0.78
CSMD2-205ENST00000373381 TRIM56Q9BRZ2 755 aaKnown RBP10.17□□□□□ -0.78
CSMD2-205ENST00000373381 NUCKS1Q9H1E3 243 aaKnown RBP10.17□□□□□ -0.78
CSMD2-205ENST00000373381 LUC7L2Q9Y383 392 aaKnown RBP10.17□□□□□ -0.78
CSMD2-205ENST00000373381 BIN1O00499 593 aa10.17□□□□□ -0.78
CSMD2-205ENST00000373381 GBP1P32455 592 aa10.17□□□□□ -0.78
CSMD2-205ENST00000373381 LEO1Q8WVC0 666 aaPredicted RBP10.17□□□□□ -0.78
CSMD2-205ENST00000373381 ANO3Q9BYT9 981 aa10.17□□□□□ -0.78
CSMD2-205ENST00000373381 MAPK8IP2Q13387 824 aaPredicted RBP10.17□□□□□ -0.78
CSMD2-205ENST00000373381 DDX27Q96GQ7 796 aaKnown RBP10.17□□□□□ -0.78
CSMD2-205ENST00000373381 MARCKSP29966 332 aaPredicted RBP10.17□□□□□ -0.78
CSMD2-205ENST00000373381 IRX3P78415 501 aaPredicted RBP10.17□□□□□ -0.78
CSMD2-205ENST00000373381 SNW1Q13573 536 aaKnown RBP10.17□□□□□ -0.78
CSMD2-205ENST00000373381 OTUD7BQ6GQQ9 843 aa10.17□□□□□ -0.78
CSMD2-205ENST00000373381 C8orf37Q96NL8 207 aa10.17□□□□□ -0.78
CSMD2-205ENST00000373381 TNNC1P63316 161 aa10.17□□□□□ -0.78
CSMD2-205ENST00000373381 ZBTB33Q86T24 672 aa10.17□□□□□ -0.78
CSMD2-205ENST00000373381 GLT8D2Q9H1C3 349 aa10.17□□□□□ -0.78
CSMD2-205ENST00000373381 FBXW4P57775 412 aa10.17□□□□□ -0.78
CSMD2-205ENST00000373381 IRX5P78411 483 aaPredicted RBP10.17□□□□□ -0.78
CSMD2-205ENST00000373381 CCDC68Q9H2F9 335 aa10.17□□□□□ -0.78
CSMD2-205ENST00000373381 RBM28Q9NW13 759 aaKnown RBP10.17□□□□□ -0.78
CSMD2-205ENST00000373381 SPOPO43791 374 aa10.16□□□□□ -0.78
CSMD2-205ENST00000373381 PPP4R1Q8TF05 950 aa10.16□□□□□ -0.78
CSMD2-205ENST00000373381 UBASH3AP57075 661 aa10.16□□□□□ -0.78
CSMD2-205ENST00000373381 C16orf45Q96MC5 204 aaPredicted RBP10.16□□□□□ -0.78
CSMD2-205ENST00000373381 PDE6BP35913 854 aa10.16□□□□□ -0.78
CSMD2-205ENST00000373381 VAV2P52735 878 aa10.16□□□□□ -0.78
CSMD2-205ENST00000373381 RSRC1Q96IZ7 334 aaKnown RBP10.16□□□□□ -0.78
CSMD2-205ENST00000373381 CCDC61Q9Y6R9 512 aa10.16□□□□□ -0.78
CSMD2-205ENST00000373381 EXOC6BQ9Y2D4 811 aa10.16□□□□□ -0.78
CSMD2-205ENST00000373381 ZBTB43O43298 467 aa10.16□□□□□ -0.78
CSMD2-205ENST00000373381 DAPK1P53355 1430 aa10.16□□□□□ -0.78
CSMD2-205ENST00000373381 MCUR1Q96AQ8 359 aa10.16□□□□□ -0.78
CSMD2-205ENST00000373381 ARFGAP3Q9NP61 516 aa10.16□□□□□ -0.78
CSMD2-205ENST00000373381 ZNF853P0CG23 659 aa10.16□□□□□ -0.78
CSMD2-205ENST00000373381 EAPPQ56P03 285 aaPredicted RBP10.16□□□□□ -0.78
CSMD2-205ENST00000373381 DCAF17Q5H9S7 520 aaPredicted RBP10.16□□□□□ -0.78
CSMD2-205ENST00000373381 MSH6P52701 1360 aa10.16□□□□□ -0.78
CSMD2-205ENST00000373381 SPECC1L-ADORA2AF8WAN1 911 aa10.16□□□□□ -0.78
CSMD2-205ENST00000373381 PPFIA3O75145 1194 aa10.16□□□□□ -0.78
CSMD2-205ENST00000373381 UTP11Q9Y3A2 253 aaKnown RBP10.16□□□□□ -0.78
CSMD2-205ENST00000373381 ABL1P00519 1130 aa10.16□□□□□ -0.78
CSMD2-205ENST00000373381 CCPG1Q9ULG6 757 aa10.16□□□□□ -0.78
CSMD2-205ENST00000373381 CAMSAP2Q08AD1 1489 aa10.16□□□□□ -0.78
CSMD2-205ENST00000373381 CCDC42Q96M95 316 aa10.16□□□□□ -0.78
CSMD2-205ENST00000373381 F8W8V4 182 aa10.15□□□□□ -0.78
CSMD2-205ENST00000373381 SLC8A2Q9UPR5 921 aa10.15□□□□□ -0.78
CSMD2-205ENST00000373381 PRPF6O94906 941 aaKnown RBP10.15□□□□□ -0.78
CSMD2-205ENST00000373381 ATF7P17544 494 aaPredicted RBP10.15□□□□□ -0.78
CSMD2-205ENST00000373381 PDCD7Q8N8D1 485 aaKnown RBP10.15□□□□□ -0.78
CSMD2-205ENST00000373381 RNF8O76064 485 aa10.15□□□□□ -0.78
CSMD2-205ENST00000373381 S100BP04271 92 aaPredicted RBP10.15□□□□□ -0.78
CSMD2-205ENST00000373381 KCNG1Q9UIX4 513 aa10.15□□□□□ -0.78
CSMD2-205ENST00000373381 ACTN4O43707 911 aaKnown RBP10.15□□□□□ -0.78
CSMD2-205ENST00000373381 DPY19L2Q6NUT2 758 aa10.15□□□□□ -0.78
CSMD2-205ENST00000373381 CERS3Q8IU89 383 aa10.15□□□□□ -0.78
CSMD2-205ENST00000373381 SPDYE1Q8NFV5 336 aaPredicted RBP10.15□□□□□ -0.78
CSMD2-205ENST00000373381 SLC4A4Q9Y6R1 1079 aa10.15□□□□□ -0.78
CSMD2-205ENST00000373381 DCUN1D2Q6PH85 259 aa10.15□□□□□ -0.78
CSMD2-205ENST00000373381 TPTE2Q6XPS3 522 aa10.15□□□□□ -0.78
CSMD2-205ENST00000373381 SDCCAG3Q96C92 435 aa10.15□□□□□ -0.78
CSMD2-205ENST00000373381 RBM17Q96I25 401 aaKnown RBP10.15□□□□□ -0.78
CSMD2-205ENST00000373381 ZKSCAN3Q9BRR0 538 aa10.15□□□□□ -0.78
CSMD2-205ENST00000373381 ANKRD2Q9GZV1 360 aa10.15□□□□□ -0.78
CSMD2-205ENST00000373381 ANKRD50Q9ULJ7 1429 aa10.15□□□□□ -0.78
CSMD2-205ENST00000373381 TRIML1Q8N9V2 468 aa10.15□□□□□ -0.78
CSMD2-205ENST00000373381 PANK2Q9BZ23 570 aa10.15□□□□□ -0.78
CSMD2-205ENST00000373381 UBXN1Q04323 297 aa10.15□□□□□ -0.79
CSMD2-205ENST00000373381 VWA3BQ502W6 1294 aa10.15□□□□□ -0.79
CSMD2-205ENST00000373381 STK32BQ9NY57 414 aa10.15□□□□□ -0.79
CSMD2-205ENST00000373381 CCDC169A6NNP5 214 aa10.15□□□□□ -0.79
CSMD2-205ENST00000373381 RAB3GAP1Q15042 981 aa10.15□□□□□ -0.79
CSMD2-205ENST00000373381 KCNG4Q8TDN1 519 aa10.15□□□□□ -0.79
CSMD2-205ENST00000373381 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.14□□□□□ -0.79
CSMD2-205ENST00000373381 AFMP43652 599 aa10.14□□□□□ -0.79
CSMD2-205ENST00000373381 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.14□□□□□ -0.79
CSMD2-205ENST00000373381 TSTA3Q13630 321 aaPredicted RBP10.14□□□□□ -0.79
CSMD2-205ENST00000373381 POMGNT1Q8WZA1 660 aa10.14□□□□□ -0.79
CSMD2-205ENST00000373381 ANAPC5Q9UJX4 755 aa10.14□□□□□ -0.79
CSMD2-205ENST00000373381 EPRSP07814 1512 aaKnown RBP10.14□□□□□ -0.79
CSMD2-205ENST00000373381 PTPDC1A2A3K4 754 aa10.14□□□□□ -0.79
CSMD2-205ENST00000373381 RRP9O43818 475 aaKnown RBP10.14□□□□□ -0.79
CSMD2-205ENST00000373381 HAUS3Q68CZ6 603 aa10.14□□□□□ -0.79
CSMD2-205ENST00000373381 CDC37L1Q7L3B6 337 aa10.14□□□□□ -0.79
CSMD2-205ENST00000373381 PAXBP1Q9Y5B6 917 aa10.14□□□□□ -0.79
CSMD2-205ENST00000373381 HAUS1Q96CS2 278 aa10.14□□□□□ -0.79
CSMD2-205ENST00000373381 KIF9Q9HAQ2 790 aa10.14□□□□□ -0.79
CSMD2-205ENST00000373381 RAD50Q92878 1312 aa10.14□□□□□ -0.79
CSMD2-205ENST00000373381 PTGS1P23219 599 aa10.14□□□□□ -0.79
CSMD2-205ENST00000373381 POLR2BP30876 1174 aaKnown RBP10.14□□□□□ -0.79
CSMD2-205ENST00000373381 PPP4R4Q6NUP7 873 aa10.14□□□□□ -0.79
CSMD2-205ENST00000373381 CEP57Q86XR8 500 aa10.14□□□□□ -0.79
CSMD2-205ENST00000373381 TTC1Q99614 292 aa10.14□□□□□ -0.79
CSMD2-205ENST00000373381 ORC6Q9Y5N6 252 aa10.14□□□□□ -0.79
CSMD2-205ENST00000373381 TEKT1Q969V4 418 aa10.14□□□□□ -0.79
CSMD2-205ENST00000373381 MED10Q9BTT4 135 aa10.14□□□□□ -0.79
CSMD2-205ENST00000373381 HAND2P61296 217 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms