RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 PTGS1P23219 599 aa27.86■■■□□ 2.05
CDK9-201ENST00000373264 ITPK1Q13572 414 aa27.86■■■□□ 2.05
CDK9-201ENST00000373264 FSIP1Q8NA03 581 aa27.86■■■□□ 2.05
CDK9-201ENST00000373264 MYL10Q9BUA6 226 aa27.86■■■□□ 2.05
CDK9-201ENST00000373264 WTIPA6NIX2 430 aaPredicted RBP27.85■■■□□ 2.05
CDK9-201ENST00000373264 RBM10P98175 930 aaKnown RBP27.85■■■□□ 2.05
CDK9-201ENST00000373264 STK11IPQ8N1F8 1099 aa27.85■■■□□ 2.05
CDK9-201ENST00000373264 UQCRHLA0A096LP55 91 aa27.85■■■□□ 2.05
CDK9-201ENST00000373264 CPLX1O14810 134 aa27.85■■■□□ 2.05
CDK9-201ENST00000373264 UQCRHP07919 91 aa27.85■■■□□ 2.05
CDK9-201ENST00000373264 MAGEB6Q8N7X4 407 aa27.85■■■□□ 2.05
CDK9-201ENST00000373264 ENGASEQ8NFI3 743 aa27.85■■■□□ 2.05
CDK9-201ENST00000373264 ZNF512BQ96KM6 892 aaPredicted RBP27.85■■■□□ 2.05
CDK9-201ENST00000373264 ZNF396Q96N95 335 aaPredicted RBP27.85■■■□□ 2.05
CDK9-201ENST00000373264 EPB41L4AQ9HCS5 686 aaPredicted RBP27.85■■■□□ 2.05
CDK9-201ENST00000373264 A0A1B0GVL5 298 aa27.84■■■□□ 2.05
CDK9-201ENST00000373264 DNTTIP2Q5QJE6 756 aaKnown RBP27.84■■■□□ 2.05
CDK9-201ENST00000373264 SPATA5Q8NB90 893 aa27.84■■■□□ 2.05
CDK9-201ENST00000373264 LPIN2Q92539 896 aa27.84■■■□□ 2.05
CDK9-201ENST00000373264 CTDSPL2Q05D32 466 aa27.84■■■□□ 2.05
CDK9-201ENST00000373264 UBE3CQ15386 1083 aa27.84■■■□□ 2.05
CDK9-201ENST00000373264 FBXO18Q8NFZ0 1043 aa27.84■■■□□ 2.05
CDK9-201ENST00000373264 STRBPQ96SI9 672 aaKnown RBP27.84■■■□□ 2.05
CDK9-201ENST00000373264 BCAMP50895 628 aa27.83■■■□□ 2.05
CDK9-201ENST00000373264 TTF1Q15361 905 aaPredicted RBP27.83■■■□□ 2.05
CDK9-201ENST00000373264 PHKBQ93100 1093 aa27.83■■■□□ 2.05
CDK9-201ENST00000373264 ARMT1Q9H993 441 aa27.83■■■□□ 2.05
CDK9-201ENST00000373264 IQSEC3Q9UPP2 1182 aaPredicted RBP27.83■■■□□ 2.05
CDK9-201ENST00000373264 COL4A1P02462 1669 aa27.83■■■□□ 2.05
CDK9-201ENST00000373264 DDX60Q8IY21 1712 aaKnown RBP27.83■■■□□ 2.05
CDK9-201ENST00000373264 PRKAB2O43741 272 aa27.83■■■□□ 2.05
CDK9-201ENST00000373264 CDC27P30260 824 aa27.83■■■□□ 2.05
CDK9-201ENST00000373264 SMIM5Q71RC9 77 aa27.83■■■□□ 2.05
CDK9-201ENST00000373264 MARCH10Q8NA82 808 aaPredicted RBP27.83■■■□□ 2.05
CDK9-201ENST00000373264 AIDAQ96BJ3 306 aa27.83■■■□□ 2.05
CDK9-201ENST00000373264 CCDC87Q9NVE4 849 aa27.83■■■□□ 2.05
CDK9-201ENST00000373264 ROBO1Q9Y6N7 1651 aa27.83■■■□□ 2.04
CDK9-201ENST00000373264 ZSCAN25Q6NSZ9 544 aa27.82■■■□□ 2.04
CDK9-201ENST00000373264 KLHL34Q8N239 644 aa27.82■■■□□ 2.04
CDK9-201ENST00000373264 TRIM5Q9C035 493 aa27.82■■■□□ 2.04
CDK9-201ENST00000373264 MBD4O95243 580 aa27.82■■■□□ 2.04
CDK9-201ENST00000373264 KCNQ4P56696 695 aa27.82■■■□□ 2.04
CDK9-201ENST00000373264 CCDC73Q6ZRK6 1079 aa27.82■■■□□ 2.04
CDK9-201ENST00000373264 MICU3Q86XE3 530 aa27.82■■■□□ 2.04
CDK9-201ENST00000373264 LRMPQ12912 555 aa27.81■■■□□ 2.04
CDK9-201ENST00000373264 TRDNQ13061 729 aa27.81■■■□□ 2.04
CDK9-201ENST00000373264 TDRD7Q8NHU6 1098 aaKnown RBP27.81■■■□□ 2.04
CDK9-201ENST00000373264 MPHOSPH8Q99549 860 aa27.81■■■□□ 2.04
CDK9-201ENST00000373264 ATRNO75882 1429 aa27.81■■■□□ 2.04
CDK9-201ENST00000373264 DDB1Q16531 1140 aa27.81■■■□□ 2.04
CDK9-201ENST00000373264 LINC00301Q8NCQ3 95 aa27.81■■■□□ 2.04
CDK9-201ENST00000373264 ANGEL1Q9UNK9 670 aaKnown RBP27.81■■■□□ 2.04
CDK9-201ENST00000373264 MYH14Q7Z406 1995 aaKnown RBP27.81■■■□□ 2.04
CDK9-201ENST00000373264 SH2B2O14492 632 aaPredicted RBP27.8■■■□□ 2.04
CDK9-201ENST00000373264 CAMTA2O94983 1202 aa27.8■■■□□ 2.04
CDK9-201ENST00000373264 FAM160A1Q05DH4 1040 aa27.8■■■□□ 2.04
CDK9-201ENST00000373264 MROH5Q6ZUA9 1318 aa27.8■■■□□ 2.04
CDK9-201ENST00000373264 LOC102724428A0A0B4J2F2 783 aa27.8■■■□□ 2.04
CDK9-201ENST00000373264 KCNQ2O43526 872 aa27.8■■■□□ 2.04
CDK9-201ENST00000373264 NDUFA8P51970 172 aa27.8■■■□□ 2.04
CDK9-201ENST00000373264 SIK1P57059 783 aa27.8■■■□□ 2.04
CDK9-201ENST00000373264 CCDC186Q7Z3E2 898 aa27.8■■■□□ 2.04
CDK9-201ENST00000373264 UTP14AQ9BVJ6 771 aaKnown RBP27.8■■■□□ 2.04
CDK9-201ENST00000373264 RTEL1Q9NZ71 1219 aa27.8■■■□□ 2.04
CDK9-201ENST00000373264 ZNF75DP51815 510 aa27.79■■■□□ 2.04
CDK9-201ENST00000373264 IQCB1Q15051 598 aa27.79■■■□□ 2.04
CDK9-201ENST00000373264 C4AP0C0L4 1744 aa27.79■■■□□ 2.04
CDK9-201ENST00000373264 C4BP0C0L5 1744 aa27.79■■■□□ 2.04
CDK9-201ENST00000373264 KINO60870 393 aaKnown RBP27.79■■■□□ 2.04
CDK9-201ENST00000373264 UQCRFS1P1P0C7P4 283 aa27.79■■■□□ 2.04
CDK9-201ENST00000373264 DRC7Q8IY82 874 aa27.79■■■□□ 2.04
CDK9-201ENST00000373264 NIP7Q9Y221 180 aaKnown RBP eCLIP27.79■■■□□ 2.04
CDK9-201ENST00000373264 MYSM1Q5VVJ2 828 aa27.78■■■□□ 2.04
CDK9-201ENST00000373264 APOA5Q6Q788 366 aa27.78■■■□□ 2.04
CDK9-201ENST00000373264 PLA2G4DQ86XP0 818 aa27.78■■■□□ 2.04
CDK9-201ENST00000373264 KIAA1524Q8TCG1 905 aa27.78■■■□□ 2.04
CDK9-201ENST00000373264 LRP5O75197 1615 aa27.78■■■□□ 2.04
CDK9-201ENST00000373264 DHX16O60231 1041 aaKnown RBP27.78■■■□□ 2.04
CDK9-201ENST00000373264 SLC5A1P13866 664 aa27.78■■■□□ 2.04
CDK9-201ENST00000373264 METAP2P50579 478 aaKnown RBP eCLIP27.78■■■□□ 2.04
CDK9-201ENST00000373264 STK38Q15208 465 aa27.78■■■□□ 2.04
CDK9-201ENST00000373264 IFNL3Q8IZI9 196 aa27.78■■■□□ 2.04
CDK9-201ENST00000373264 FMR1NBQ8N0W7 255 aaPredicted RBP27.78■■■□□ 2.04
CDK9-201ENST00000373264 MIGA1Q8NAN2 632 aa27.78■■■□□ 2.04
CDK9-201ENST00000373264 TSC1Q92574 1164 aa27.78■■■□□ 2.04
CDK9-201ENST00000373264 NUTM2BA6NNL0 878 aaPredicted RBP27.77■■■□□ 2.04
CDK9-201ENST00000373264 NUTM2EB1AL46 878 aaPredicted RBP27.77■■■□□ 2.04
CDK9-201ENST00000373264 SMIM22K7EJ46 135 aa27.77■■■□□ 2.04
CDK9-201ENST00000373264 KIF23Q02241 960 aaPredicted RBP27.77■■■□□ 2.04
CDK9-201ENST00000373264 NUTM2AQ8IVF1 878 aaPredicted RBP27.77■■■□□ 2.04
CDK9-201ENST00000373264 IGDCC4Q8TDY8 1250 aa27.77■■■□□ 2.04
CDK9-201ENST00000373264 PLCH1Q4KWH8 1693 aa27.77■■■□□ 2.04
CDK9-201ENST00000373264 SPATA31A1Q5TZJ5 1347 aa27.77■■■□□ 2.04
CDK9-201ENST00000373264 LCORLQ8N3X6 602 aa27.77■■■□□ 2.04
CDK9-201ENST00000373264 ZKSCAN3Q9BRR0 538 aa27.77■■■□□ 2.04
CDK9-201ENST00000373264 MRPS27Q92552 414 aaKnown RBP27.76■■■□□ 2.03
CDK9-201ENST00000373264 ZMYM6O95789 1325 aa27.76■■■□□ 2.03
CDK9-201ENST00000373264 SF3A1Q15459 793 aaKnown RBP27.76■■■□□ 2.03
CDK9-201ENST00000373264 C3orf67Q6ZVT6 689 aa27.76■■■□□ 2.03
CDK9-201ENST00000373264 ZSWIM5Q9P217 1185 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms