RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 AIFM3Q96NN9 605 aa15.82■□□□□ 0.12
USP49-201ENST00000373006 MROH7-TTC4A0A0A0MT08 1334 aa15.82■□□□□ 0.12
USP49-201ENST00000373006 GOLGA8BA8MQT2 603 aa15.81■□□□□ 0.12
USP49-201ENST00000373006 ANO1Q5XXA6 986 aa15.81■□□□□ 0.12
USP49-201ENST00000373006 CCDC34Q96HJ3 373 aa15.81■□□□□ 0.12
USP49-201ENST00000373006 LTN1O94822 1766 aa15.81■□□□□ 0.12
USP49-201ENST00000373006 YEATS4O95619 227 aa15.81■□□□□ 0.12
USP49-201ENST00000373006 EVCP57679 992 aa15.81■□□□□ 0.12
USP49-201ENST00000373006 REXO1L1PQ8IX06 675 aa15.81■□□□□ 0.12
USP49-201ENST00000373006 ZNF594Q96JF6 807 aaPredicted RBP15.81■□□□□ 0.12
USP49-201ENST00000373006 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.81■□□□□ 0.12
USP49-201ENST00000373006 TADA3O75528 432 aa15.81■□□□□ 0.12
USP49-201ENST00000373006 ST5P78524 1137 aa15.81■□□□□ 0.12
USP49-201ENST00000373006 OSBP2Q969R2 916 aa15.81■□□□□ 0.12
USP49-201ENST00000373006 PARP3Q9Y6F1 533 aa15.81■□□□□ 0.12
USP49-201ENST00000373006 PHLPP2Q6ZVD8 1323 aa15.8■□□□□ 0.12
USP49-201ENST00000373006 SASH3O75995 380 aa15.8■□□□□ 0.12
USP49-201ENST00000373006 IFIT1P09914 478 aaKnown RBP15.8■□□□□ 0.12
USP49-201ENST00000373006 SYKP43405 635 aa15.8■□□□□ 0.12
USP49-201ENST00000373006 RABL6Q3YEC7 729 aaPredicted RBP15.8■□□□□ 0.12
USP49-201ENST00000373006 PDILTQ8N807 584 aa15.8■□□□□ 0.12
USP49-201ENST00000373006 SECISBP2LQ93073 1101 aaKnown RBP15.8■□□□□ 0.12
USP49-201ENST00000373006 FANCLQ9NW38 375 aa15.8■□□□□ 0.12
USP49-201ENST00000373006 TOP1P11387 765 aaKnown RBP15.8■□□□□ 0.12
USP49-201ENST00000373006 KCNJ6P48051 423 aa15.8■□□□□ 0.12
USP49-201ENST00000373006 WASHC4Q2M389 1173 aa15.8■□□□□ 0.12
USP49-201ENST00000373006 RSPH14Q9UHP6 348 aa15.8■□□□□ 0.12
USP49-201ENST00000373006 RNF113AO15541 343 aaKnown RBP15.79■□□□□ 0.12
USP49-201ENST00000373006 PRC1O43663 620 aa15.79■□□□□ 0.12
USP49-201ENST00000373006 CMA1P23946 247 aa15.79■□□□□ 0.12
USP49-201ENST00000373006 LRRC24Q50LG9 513 aa15.79■□□□□ 0.12
USP49-201ENST00000373006 CLIC6Q96NY7 704 aa15.79■□□□□ 0.12
USP49-201ENST00000373006 WDR24Q96S15 920 aa15.79■□□□□ 0.12
USP49-201ENST00000373006 HPS5Q9UPZ3 1129 aa15.79■□□□□ 0.12
USP49-201ENST00000373006 MRC1P22897 1456 aa15.79■□□□□ 0.12
USP49-201ENST00000373006 RXRAP19793 462 aa15.79■□□□□ 0.12
USP49-201ENST00000373006 GYS2P54840 703 aa15.79■□□□□ 0.12
USP49-201ENST00000373006 TEX35Q5T0J7 233 aa15.79■□□□□ 0.12
USP49-201ENST00000373006 ATG9AQ7Z3C6 839 aa15.79■□□□□ 0.12
USP49-201ENST00000373006 VWA3AA6NCI4 1184 aa15.79■□□□□ 0.12
USP49-201ENST00000373006 GNG11P61952 73 aa15.79■□□□□ 0.12
USP49-201ENST00000373006 MYL5Q02045 173 aa15.79■□□□□ 0.12
USP49-201ENST00000373006 LRRFIP1Q32MZ4 808 aaKnown RBP15.79■□□□□ 0.12
USP49-201ENST00000373006 ANKLE2Q86XL3 938 aa15.79■□□□□ 0.12
USP49-201ENST00000373006 RFX7Q2KHR2 1363 aa15.78■□□□□ 0.12
USP49-201ENST00000373006 IKBKBO14920 756 aa15.78■□□□□ 0.12
USP49-201ENST00000373006 KIF23Q02241 960 aaPredicted RBP15.78■□□□□ 0.12
USP49-201ENST00000373006 ARHGEF25Q86VW2 580 aa15.78■□□□□ 0.12
USP49-201ENST00000373006 PALLDQ8WX93 1383 aa15.78■□□□□ 0.12
USP49-201ENST00000373006 EFCAB8A8MWE9 144 aa15.78■□□□□ 0.12
USP49-201ENST00000373006 CCP110O43303 1012 aa15.78■□□□□ 0.12
USP49-201ENST00000373006 CSB-PGBD3P0DP91 1061 aa15.78■□□□□ 0.12
USP49-201ENST00000373006 SMARCE1Q969G3 411 aa15.78■□□□□ 0.12
USP49-201ENST00000373006 ZSWIM4Q9H7M6 989 aa15.78■□□□□ 0.12
USP49-201ENST00000373006 SLC52A2Q9HAB3 445 aa15.78■□□□□ 0.12
USP49-201ENST00000373006 PPP2R2CQ9Y2T4 447 aa15.78■□□□□ 0.12
USP49-201ENST00000373006 TUBB4AP04350 444 aa15.77■□□□□ 0.12
USP49-201ENST00000373006 ADKP55263 362 aaKnown RBP15.77■□□□□ 0.12
USP49-201ENST00000373006 SPECC1Q5M775 1068 aa15.77■□□□□ 0.12
USP49-201ENST00000373006 BRAPQ7Z569 592 aa15.77■□□□□ 0.12
USP49-201ENST00000373006 RAPGEF4Q8WZA2 1011 aa15.77■□□□□ 0.12
USP49-201ENST00000373006 DHX16O60231 1041 aaKnown RBP15.77■□□□□ 0.12
USP49-201ENST00000373006 TBC1D8O95759 1140 aa15.77■□□□□ 0.12
USP49-201ENST00000373006 FGAP02671 866 aa15.77■□□□□ 0.12
USP49-201ENST00000373006 OAS2P29728 719 aaKnown RBP15.77■□□□□ 0.12
USP49-201ENST00000373006 LAMA4Q16363 1823 aa15.77■□□□□ 0.12
USP49-201ENST00000373006 SHC4Q6S5L8 630 aa15.77■□□□□ 0.12
USP49-201ENST00000373006 VSTM4Q8IW00 320 aa15.77■□□□□ 0.12
USP49-201ENST00000373006 DENND2AQ9ULE3 1009 aa15.77■□□□□ 0.12
USP49-201ENST00000373006 MYH15Q9Y2K3 1946 aa15.77■□□□□ 0.11
USP49-201ENST00000373006 TRIM66O15016 1216 aa15.77■□□□□ 0.11
USP49-201ENST00000373006 SLC39A14Q15043 492 aa15.77■□□□□ 0.11
USP49-201ENST00000373006 LRP10Q7Z4F1 713 aa15.77■□□□□ 0.11
USP49-201ENST00000373006 FOXP4Q8IVH2 680 aaPredicted RBP15.77■□□□□ 0.11
USP49-201ENST00000373006 DDX17Q92841 729 aaKnown RBP15.77■□□□□ 0.11
USP49-201ENST00000373006 LMO7Q8WWI1 1683 aa15.76■□□□□ 0.11
USP49-201ENST00000373006 NFAT5O94916 1531 aa15.76■□□□□ 0.11
USP49-201ENST00000373006 ABCC6O95255 1503 aa15.76■□□□□ 0.11
USP49-201ENST00000373006 A0A1B0GUL7 405 aa15.76■□□□□ 0.11
USP49-201ENST00000373006 FOXN1O15353 648 aa15.76■□□□□ 0.11
USP49-201ENST00000373006 CDC27P30260 824 aa15.76■□□□□ 0.11
USP49-201ENST00000373006 CASQ1P31415 396 aa15.76■□□□□ 0.11
USP49-201ENST00000373006 IMMTQ16891 758 aaKnown RBP15.76■□□□□ 0.11
USP49-201ENST00000373006 STK11IPQ8N1F8 1099 aa15.76■□□□□ 0.11
USP49-201ENST00000373006 PUS3Q9BZE2 481 aaKnown RBP15.76■□□□□ 0.11
USP49-201ENST00000373006 FOXP2O15409 715 aa15.76■□□□□ 0.11
USP49-201ENST00000373006 ZSCAN12O43309 604 aa15.76■□□□□ 0.11
USP49-201ENST00000373006 CBFA2T2O43439 604 aa15.76■□□□□ 0.11
USP49-201ENST00000373006 FOXO4P98177 505 aa15.76■□□□□ 0.11
USP49-201ENST00000373006 PDE4BQ07343 736 aa15.76■□□□□ 0.11
USP49-201ENST00000373006 RAD51AP2Q09MP3 1159 aa15.76■□□□□ 0.11
USP49-201ENST00000373006 LONRF3Q496Y0 759 aa15.76■□□□□ 0.11
USP49-201ENST00000373006 CC2D1AQ6P1N0 951 aaPredicted RBP15.76■□□□□ 0.11
USP49-201ENST00000373006 TOGARAM2Q6ZUX3 1019 aa15.76■□□□□ 0.11
USP49-201ENST00000373006 DESI2Q9BSY9 194 aa15.76■□□□□ 0.11
USP49-201ENST00000373006 SRRTQ9BXP5 876 aaKnown RBP15.76■□□□□ 0.11
USP49-201ENST00000373006 ANTXR2P58335 489 aa15.75■□□□□ 0.11
USP49-201ENST00000373006 SMC1AQ14683 1233 aaKnown RBP15.75■□□□□ 0.11
USP49-201ENST00000373006 TTC5Q8N0Z6 440 aa15.75■□□□□ 0.11
USP49-201ENST00000373006 INTS13Q9NVM9 706 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms