RNA–Protein interactions for RNA: ENST00000372273.7

TMEM254-201, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-201ENST00000372273 WDR90Q96KV7 1748 aa11.67□□□□□ -0.54
TMEM254-201ENST00000372273 ZNF280AP59817 542 aaPredicted RBP11.66□□□□□ -0.54
TMEM254-201ENST00000372273 CCDC158Q5M9N0 1113 aa11.66□□□□□ -0.54
TMEM254-201ENST00000372273 PNMA8AQ86V59 439 aaPredicted RBP11.66□□□□□ -0.54
TMEM254-201ENST00000372273 ZNF384Q8TF68 577 aa11.66□□□□□ -0.54
TMEM254-201ENST00000372273 GLIS2Q9BZE0 524 aaPredicted RBP11.66□□□□□ -0.54
TMEM254-201ENST00000372273 CLRN2A0PK11 232 aa11.66□□□□□ -0.54
TMEM254-201ENST00000372273 CHGBP05060 677 aa11.66□□□□□ -0.54
TMEM254-201ENST00000372273 CYP2E1P05181 493 aaPredicted RBP11.66□□□□□ -0.54
TMEM254-201ENST00000372273 ARID4AP29374 1257 aaPredicted RBP11.66□□□□□ -0.54
TMEM254-201ENST00000372273 CACNB3P54284 484 aa11.66□□□□□ -0.54
TMEM254-201ENST00000372273 C1QTNF8P60827 252 aa11.66□□□□□ -0.54
TMEM254-201ENST00000372273 CFAP100Q494V2 611 aa11.66□□□□□ -0.54
TMEM254-201ENST00000372273 ANGEL2Q5VTE6 544 aaKnown RBP11.66□□□□□ -0.54
TMEM254-201ENST00000372273 CNTROBQ8N137 903 aa11.66□□□□□ -0.54
TMEM254-201ENST00000372273 BOLA2Q9H3K6 86 aa11.66□□□□□ -0.54
TMEM254-201ENST00000372273 UPF2Q9HAU5 1272 aaKnown RBP11.66□□□□□ -0.54
TMEM254-201ENST00000372273 GGA3Q9NZ52 723 aa11.66□□□□□ -0.54
TMEM254-201ENST00000372273 DENND2AQ9ULE3 1009 aa11.66□□□□□ -0.54
TMEM254-201ENST00000372273 SLFNL1Q499Z3 407 aa11.65□□□□□ -0.54
TMEM254-201ENST00000372273 USP50Q70EL3 339 aaPredicted RBP11.65□□□□□ -0.54
TMEM254-201ENST00000372273 SMC5Q8IY18 1101 aa11.65□□□□□ -0.54
TMEM254-201ENST00000372273 LNPKQ9C0E8 428 aa11.65□□□□□ -0.54
TMEM254-201ENST00000372273 ADM5C9JUS6 153 aa11.64□□□□□ -0.55
TMEM254-201ENST00000372273 ITGBL1O95965 494 aaPredicted RBP11.64□□□□□ -0.55
TMEM254-201ENST00000372273 LDHDQ86WU2 507 aa11.64□□□□□ -0.55
TMEM254-201ENST00000372273 DNAJC2Q99543 621 aaKnown RBP11.64□□□□□ -0.55
TMEM254-201ENST00000372273 PIH1D3Q9NQM4 214 aaKnown RBP11.64□□□□□ -0.55
TMEM254-201ENST00000372273 MAP4K4O95819 1239 aaPredicted RBP11.64□□□□□ -0.55
TMEM254-201ENST00000372273 CRKP46108 304 aa11.64□□□□□ -0.55
TMEM254-201ENST00000372273 CHADLQ6NUI6 762 aa11.64□□□□□ -0.55
TMEM254-201ENST00000372273 USP48Q86UV5 1035 aa11.64□□□□□ -0.55
TMEM254-201ENST00000372273 WDR66Q8TBY9 1149 aa11.64□□□□□ -0.55
TMEM254-201ENST00000372273 TDRD3Q9H7E2 651 aaKnown RBP11.64□□□□□ -0.55
TMEM254-201ENST00000372273 MYO3BQ8WXR4 1341 aa11.64□□□□□ -0.55
TMEM254-201ENST00000372273 LDHBP07195 334 aaKnown RBP11.63□□□□□ -0.55
TMEM254-201ENST00000372273 DLGAP5Q15398 846 aa11.63□□□□□ -0.55
TMEM254-201ENST00000372273 SMC1BQ8NDV3 1235 aa11.63□□□□□ -0.55
TMEM254-201ENST00000372273 ZNF408Q9H9D4 720 aa11.63□□□□□ -0.55
TMEM254-201ENST00000372273 FZD1Q9UP38 647 aa11.63□□□□□ -0.55
TMEM254-201ENST00000372273 SPDYE2BA6NHP3 402 aa11.63□□□□□ -0.55
TMEM254-201ENST00000372273 SPDYE6P0CI01 402 aa11.63□□□□□ -0.55
TMEM254-201ENST00000372273 MECOMQ03112 1051 aa11.63□□□□□ -0.55
TMEM254-201ENST00000372273 KRT26Q7Z3Y9 468 aa11.63□□□□□ -0.55
TMEM254-201ENST00000372273 ADGRA1Q86SQ6 560 aa11.63□□□□□ -0.55
TMEM254-201ENST00000372273 CDAN1Q8IWY9 1227 aa11.63□□□□□ -0.55
TMEM254-201ENST00000372273 RBM46Q8TBY0 533 aaKnown RBP11.63□□□□□ -0.55
TMEM254-201ENST00000372273 TBC1D22AQ8WUA7 517 aa11.63□□□□□ -0.55
TMEM254-201ENST00000372273 RAI14Q9P0K7 980 aa11.63□□□□□ -0.55
TMEM254-201ENST00000372273 LRP2BPQ9P2M1 347 aa11.63□□□□□ -0.55
TMEM254-201ENST00000372273 HDAC9Q9UKV0 1011 aa11.63□□□□□ -0.55
TMEM254-201ENST00000372273 ZNF646O15015 1829 aaPredicted RBP11.62□□□□□ -0.55
TMEM254-201ENST00000372273 GOLIM4O00461 696 aa11.62□□□□□ -0.55
TMEM254-201ENST00000372273 SEMA3EO15041 775 aa11.62□□□□□ -0.55
TMEM254-201ENST00000372273 UQCRFS1P1P0C7P4 283 aa11.62□□□□□ -0.55
TMEM254-201ENST00000372273 APOBEC3HQ6NTF7 200 aaKnown RBP11.62□□□□□ -0.55
TMEM254-201ENST00000372273 VEZTQ9HBM0 779 aa11.62□□□□□ -0.55
TMEM254-201ENST00000372273 IDH1O75874 414 aaKnown RBP11.61□□□□□ -0.55
TMEM254-201ENST00000372273 FKBP1AP62942 108 aaKnown RBP11.61□□□□□ -0.55
TMEM254-201ENST00000372273 ZBED3Q96IU2 234 aaPredicted RBP11.61□□□□□ -0.55
TMEM254-201ENST00000372273 TCP10L2B9ZVM9 353 aa11.61□□□□□ -0.55
TMEM254-201ENST00000372273 CST9Q5W186 159 aa11.61□□□□□ -0.55
TMEM254-201ENST00000372273 DZIP1Q86YF9 867 aaKnown RBP11.61□□□□□ -0.55
TMEM254-201ENST00000372273 TEKT1Q969V4 418 aa11.61□□□□□ -0.55
TMEM254-201ENST00000372273 DCPSQ96C86 337 aaKnown RBP11.61□□□□□ -0.55
TMEM254-201ENST00000372273 NSUN4Q96CB9 384 aaKnown RBP11.61□□□□□ -0.55
TMEM254-201ENST00000372273 GCC1Q96CN9 775 aa11.61□□□□□ -0.55
TMEM254-201ENST00000372273 PGAP2Q9UHJ9 254 aa11.61□□□□□ -0.55
TMEM254-201ENST00000372273 SERPINA10Q9UK55 444 aa11.61□□□□□ -0.55
TMEM254-201ENST00000372273 DAGLAQ9Y4D2 1042 aa11.61□□□□□ -0.55
TMEM254-201ENST00000372273 CENPFP49454 3210 aa11.61□□□□□ -0.55
TMEM254-201ENST00000372273 ADAMTSL1Q8N6G6 1762 aa11.6□□□□□ -0.55
TMEM254-201ENST00000372273 SCN4AP35499 1836 aa11.6□□□□□ -0.55
TMEM254-201ENST00000372273 SLURP2P0DP57 97 aa11.59□□□□□ -0.55
TMEM254-201ENST00000372273 NUCB1Q02818 461 aa11.59□□□□□ -0.55
TMEM254-201ENST00000372273 NFIAQ12857 509 aa11.59□□□□□ -0.55
TMEM254-201ENST00000372273 PRKG1Q13976 671 aa11.59□□□□□ -0.55
TMEM254-201ENST00000372273 ZNF512BQ96KM6 892 aaPredicted RBP11.59□□□□□ -0.55
TMEM254-201ENST00000372273 SALL1Q9NSC2 1324 aa11.59□□□□□ -0.55
TMEM254-201ENST00000372273 ECHDC1Q9NTX5 307 aa11.59□□□□□ -0.55
TMEM254-201ENST00000372273 SEC24BO95487 1268 aa11.59□□□□□ -0.55
TMEM254-201ENST00000372273 ATP5JP18859 108 aa11.59□□□□□ -0.55
TMEM254-201ENST00000372273 TCP10Q12799 353 aa11.59□□□□□ -0.55
TMEM254-201ENST00000372273 BECN1Q14457 450 aa11.59□□□□□ -0.55
TMEM254-201ENST00000372273 MOB2Q70IA6 237 aa11.59□□□□□ -0.55
TMEM254-201ENST00000372273 CDC37L1Q7L3B6 337 aa11.59□□□□□ -0.55
TMEM254-201ENST00000372273 CHD1LQ86WJ1 897 aa11.59□□□□□ -0.55
TMEM254-201ENST00000372273 SULF1Q8IWU6 871 aa11.59□□□□□ -0.55
TMEM254-201ENST00000372273 MIGA1Q8NAN2 632 aa11.59□□□□□ -0.55
TMEM254-201ENST00000372273 ZC3H15Q8WU90 426 aaKnown RBP11.59□□□□□ -0.55
TMEM254-201ENST00000372273 ZDHHC15Q96MV8 337 aa11.59□□□□□ -0.55
TMEM254-201ENST00000372273 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.59□□□□□ -0.55
TMEM254-201ENST00000372273 ZNF70Q9UC06 446 aaPredicted RBP11.59□□□□□ -0.55
TMEM254-201ENST00000372273 PASKQ96RG2 1323 aa11.58□□□□□ -0.56
TMEM254-201ENST00000372273 MX1P20591 662 aa11.58□□□□□ -0.56
TMEM254-201ENST00000372273 FSTL1Q12841 308 aa11.58□□□□□ -0.56
TMEM254-201ENST00000372273 CDC42EP5Q6NZY7 148 aa11.58□□□□□ -0.56
TMEM254-201ENST00000372273 ZFPM1Q8IX07 1006 aa11.58□□□□□ -0.56
TMEM254-201ENST00000372273 MAGEB6Q8N7X4 407 aa11.58□□□□□ -0.56
TMEM254-201ENST00000372273 PI4K2BQ8TCG2 481 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms