RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 GTF3C6Q969F1 213 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 KIF13AQ9H1H9 1805 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 PATL2C9JE40 543 aaKnown RBP6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 SPTLC2O15270 562 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 NEMFO60524 1076 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 CALML3P27482 149 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 PPFIBP1Q86W92 1011 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 PIBF1Q8WXW3 757 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 ZNF622Q969S3 477 aaKnown RBP eCLIP6.13□□□□□ -1.434e-9■□□□□ 9
SMNDC1-202ENST00000369603 DACT1Q9NYF0 836 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 USP25Q9UHP3 1055 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 TRPC5Q9UL62 973 aaPredicted RBP6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 PARP3Q9Y6F1 533 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 USP42Q9H9J4 1324 aaKnown RBP6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 PDE6AP16499 860 aa6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 SYKP43405 635 aa6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 ZNF445P59923 1031 aa6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 NKX1-1Q15270 411 aaPredicted RBP6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 ME3Q16798 604 aa6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 RABL6Q3YEC7 729 aaPredicted RBP6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 GIMAP6Q6P9H5 292 aa6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 ISCA1Q9BUE6 129 aa6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 PUS3Q9BZE2 481 aaKnown RBP6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 ARMT1Q9H993 441 aa6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 MCM9Q9NXL9 1143 aa6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 STX8Q9UNK0 236 aa6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 MON2Q7Z3U7 1717 aa6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 B4E1Z4 1266 aa6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 SEMA3EO15041 775 aa6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 KRT18P05783 430 aaKnown RBP6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 CCDC70Q6NSX1 233 aa6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 SAMD1Q6SPF0 538 aaPredicted RBP6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 RASEFQ8IZ41 740 aa6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 LMBRD1Q9NUN5 540 aa6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 PALLDQ8WX93 1383 aa6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 OFD1O75665 1012 aa6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 TMEM266Q2M3C6 531 aa6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 HS1BP3Q53T59 392 aa6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 EPHA10Q5JZY3 1008 aa6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 TTLL11Q8NHH1 800 aa6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 GGA1Q9UJY5 639 aa6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 UTYO14607 1347 aa6.12□□□□□ -1.43
SMNDC1-202ENST00000369603 KIF1AQ12756 1690 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 PFKFB2O60825 505 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 EPS15P42566 896 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 TRAF1Q13077 416 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 CCDC96Q2M329 555 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 AKNAD1Q5T1N1 836 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 TRIM75PA6NK02 468 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 NBPF26B4DH59 902 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 DEXIO95424 95 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 ADCY5O95622 1261 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 PCP11498 1178 aaKnown RBP6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 CYP19A1P11511 503 aaPredicted RBP6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 CHRNDQ07001 517 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 NECTIN1Q15223 517 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 CFAP100Q494V2 611 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 NBPF14Q5TI25 921 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 NBPF10Q6P3W6 841 aaKnown RBP6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 FILIP1Q7Z7B0 1213 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 NBPF15Q8N660 670 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 FLAD1Q8NFF5 587 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 TBC1D22AQ8WUA7 517 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 TCP11L1Q9NUJ3 509 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 ZNHIT6Q9NWK9 470 aaKnown RBP6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 FSD2A1L4K1 749 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 KIF2AO00139 706 aaPredicted RBP6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 PPFIA3O75145 1194 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 UFL1O94874 794 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 GSDMDP57764 484 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 TTC6Q86TZ1 520 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 MNS1Q8NEH6 495 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 SEC62Q99442 399 aaKnown RBP6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 CABP5Q9NP86 173 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 TPCN1Q9ULQ1 816 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 MAST3O60307 1309 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 ABCC12Q96J65 1359 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 DYNC1I1O14576 645 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 CD2BP2O95400 341 aaKnown RBP6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 FGAP02671 866 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 SFPQP23246 707 aaKnown RBP eCLIP6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 ADORA1P30542 326 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 RILPL1Q5EBL4 403 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 CLIP2Q9UDT6 1046 aa6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 ZHX1Q9UKY1 873 aaPredicted RBP6.11□□□□□ -1.43
SMNDC1-202ENST00000369603 CYP21A2P08686 494 aa6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 TNNT3P45378 269 aaPredicted RBP6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 PHKA1P46020 1223 aa6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 FAM160A1Q05DH4 1040 aa6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 PLA2G12BQ9BX93 195 aa6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 PPP1R1BQ9UD71 204 aaPredicted RBP6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 KRT2P35908 639 aa6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 UBA7P41226 1012 aa6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 CBX1P83916 185 aa6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 AMPD3Q01432 767 aa6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 TYRO3Q06418 890 aa6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 ADCK5Q3MIX3 580 aa6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 USPL1Q5W0Q7 1092 aa6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 TMED8Q6PL24 325 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms