RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 GPHNQ9NQX3 736 aaPredicted RBP12.58□□□□□ -0.4
TPM3-212ENST00000368533 TMEM63CQ9P1W3 806 aa12.58□□□□□ -0.4
TPM3-212ENST00000368533 BLOC1S2Q6QNY1 142 aa12.58□□□□□ -0.4
TPM3-212ENST00000368533 ZNF710Q8N1W2 664 aa12.58□□□□□ -0.4
TPM3-212ENST00000368533 ZNF830Q96NB3 372 aaPredicted RBP12.58□□□□□ -0.4
TPM3-212ENST00000368533 ZKSCAN5Q9Y2L8 839 aa12.58□□□□□ -0.4
TPM3-212ENST00000368533 SMIM22K7EJ46 135 aa12.57□□□□□ -0.4
TPM3-212ENST00000368533 MMP10P09238 476 aa12.57□□□□□ -0.4
TPM3-212ENST00000368533 ZNF445P59923 1031 aa12.57□□□□□ -0.4
TPM3-212ENST00000368533 UTP14CQ5TAP6 766 aaKnown RBP12.57□□□□□ -0.4
TPM3-212ENST00000368533 SASS6Q6UVJ0 657 aa12.57□□□□□ -0.4
TPM3-212ENST00000368533 SCN7AQ01118 1682 aa12.57□□□□□ -0.4
TPM3-212ENST00000368533 KDM4AO75164 1064 aa12.57□□□□□ -0.4
TPM3-212ENST00000368533 ST5P78524 1137 aa12.57□□□□□ -0.4
TPM3-212ENST00000368533 SLC10A5Q5PT55 438 aa12.57□□□□□ -0.4
TPM3-212ENST00000368533 RNF20Q5VTR2 975 aa12.57□□□□□ -0.4
TPM3-212ENST00000368533 FAM84BQ96KN1 310 aaPredicted RBP12.57□□□□□ -0.4
TPM3-212ENST00000368533 TNRC6CQ9HCJ0 1690 aaKnown RBP12.57□□□□□ -0.4
TPM3-212ENST00000368533 FOXP2O15409 715 aa12.57□□□□□ -0.4
TPM3-212ENST00000368533 MBD4O95243 580 aa12.57□□□□□ -0.4
TPM3-212ENST00000368533 BRD1O95696 1058 aa12.57□□□□□ -0.4
TPM3-212ENST00000368533 ADGRA1Q86SQ6 560 aa12.57□□□□□ -0.4
TPM3-212ENST00000368533 NKX2-3Q8TAU0 364 aa12.57□□□□□ -0.4
TPM3-212ENST00000368533 TTC14Q96N46 770 aa12.57□□□□□ -0.4
TPM3-212ENST00000368533 CGNQ9P2M7 1197 aaKnown RBP12.57□□□□□ -0.4
TPM3-212ENST00000368533 TPCN1Q9ULQ1 816 aa12.57□□□□□ -0.4
TPM3-212ENST00000368533 POLRMTO00411 1230 aaKnown RBP12.56□□□□□ -0.4
TPM3-212ENST00000368533 MBD3O95983 291 aa12.56□□□□□ -0.4
TPM3-212ENST00000368533 FGAP02671 866 aa12.56□□□□□ -0.4
TPM3-212ENST00000368533 ARID4AP29374 1257 aaPredicted RBP12.56□□□□□ -0.4
TPM3-212ENST00000368533 ADD2P35612 726 aa12.56□□□□□ -0.4
TPM3-212ENST00000368533 CAVIN4Q5BKX8 364 aa12.56□□□□□ -0.4
TPM3-212ENST00000368533 APPBP2Q92624 585 aa12.56□□□□□ -0.4
TPM3-212ENST00000368533 AIDAQ96BJ3 306 aa12.56□□□□□ -0.4
TPM3-212ENST00000368533 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.56□□□□□ -0.4
TPM3-212ENST00000368533 HELLSQ9NRZ9 838 aa12.56□□□□□ -0.4
TPM3-212ENST00000368533 AKAP11Q9UKA4 1901 aa12.56□□□□□ -0.4
TPM3-212ENST00000368533 RIMBP2O15034 1052 aa12.56□□□□□ -0.4
TPM3-212ENST00000368533 UQCRFS1P1P0C7P4 283 aa12.56□□□□□ -0.4
TPM3-212ENST00000368533 CUL4AQ13619 759 aa12.56□□□□□ -0.4
TPM3-212ENST00000368533 ME3Q16798 604 aa12.56□□□□□ -0.4
TPM3-212ENST00000368533 FBXW7Q969H0 707 aa12.56□□□□□ -0.4
TPM3-212ENST00000368533 SDR42E1Q8WUS8 393 aa12.55□□□□□ -0.4
TPM3-212ENST00000368533 INTS4Q96HW7 963 aaKnown RBP12.55□□□□□ -0.4
TPM3-212ENST00000368533 NEK1Q96PY6 1258 aa12.55□□□□□ -0.4
TPM3-212ENST00000368533 SMC3Q9UQE7 1217 aa12.55□□□□□ -0.4
TPM3-212ENST00000368533 WDR33Q9C0J8 1336 aaKnown RBP12.55□□□□□ -0.4
TPM3-212ENST00000368533 UBR3Q6ZT12 1888 aa12.55□□□□□ -0.4
TPM3-212ENST00000368533 Q6ZUG5 572 aa12.55□□□□□ -0.4
TPM3-212ENST00000368533 MTERF4Q7Z6M4 381 aaKnown RBP12.55□□□□□ -0.4
TPM3-212ENST00000368533 ZSWIM6Q9HCJ5 1215 aa12.55□□□□□ -0.4
TPM3-212ENST00000368533 TOMM22Q9NS69 142 aa12.55□□□□□ -0.4
TPM3-212ENST00000368533 ZNF804BA4D1E1 1349 aa12.55□□□□□ -0.4
TPM3-212ENST00000368533 PTMAP06454 111 aaKnown RBP12.55□□□□□ -0.4
TPM3-212ENST00000368533 LCORLQ8N3X6 602 aa12.55□□□□□ -0.4
TPM3-212ENST00000368533 BRF1Q92994 677 aa12.55□□□□□ -0.4
TPM3-212ENST00000368533 ZNF622Q969S3 477 aaKnown RBP eCLIP12.55□□□□□ -0.42e-8■■□□□ 13.1
TPM3-212ENST00000368533 CHMP4CQ96CF2 233 aa12.55□□□□□ -0.4
TPM3-212ENST00000368533 U3KPZ7 1027 aaPredicted RBP12.55□□□□□ -0.4
TPM3-212ENST00000368533 CYP7A1P22680 504 aa12.54□□□□□ -0.4
TPM3-212ENST00000368533 PRDX5P30044 214 aa12.54□□□□□ -0.4
TPM3-212ENST00000368533 DYNLL1P63167 89 aaKnown RBP12.54□□□□□ -0.4
TPM3-212ENST00000368533 MAP3K12Q12852 859 aa12.54□□□□□ -0.4
TPM3-212ENST00000368533 SYAP1Q96A49 352 aaPredicted RBP12.54□□□□□ -0.4
TPM3-212ENST00000368533 LIMCH1Q9UPQ0 1083 aa12.54□□□□□ -0.4
TPM3-212ENST00000368533 LAMB2P55268 1798 aa12.54□□□□□ -0.4
TPM3-212ENST00000368533 C6orf229H3BNL8 230 aa12.54□□□□□ -0.4
TPM3-212ENST00000368533 GADD45BO75293 160 aaPredicted RBP12.54□□□□□ -0.4
TPM3-212ENST00000368533 UFL1O94874 794 aa12.54□□□□□ -0.4
TPM3-212ENST00000368533 CCT2P78371 535 aaKnown RBP12.54□□□□□ -0.4
TPM3-212ENST00000368533 GPSM2P81274 684 aa12.54□□□□□ -0.4
TPM3-212ENST00000368533 GRAPQ13588 217 aa12.54□□□□□ -0.4
TPM3-212ENST00000368533 LRSAM1Q6UWE0 723 aa12.54□□□□□ -0.4
TPM3-212ENST00000368533 GRAPLQ8TC17 118 aaPredicted RBP12.54□□□□□ -0.4
TPM3-212ENST00000368533 COL1A1P02452 1464 aaPredicted RBP12.54□□□□□ -0.4
TPM3-212ENST00000368533 CASZ1Q86V15 1759 aa12.54□□□□□ -0.4
TPM3-212ENST00000368533 PNPLA7Q6ZV29 1317 aa12.54□□□□□ -0.4
TPM3-212ENST00000368533 E7EWF7 191 aa12.53□□□□□ -0.4
TPM3-212ENST00000368533 RPS6KB1P23443 525 aa12.53□□□□□ -0.4
TPM3-212ENST00000368533 HIBADHP31937 336 aaKnown RBP12.53□□□□□ -0.4
TPM3-212ENST00000368533 EVX2Q03828 476 aa12.53□□□□□ -0.4
TPM3-212ENST00000368533 CTDSPL2Q05D32 466 aa12.53□□□□□ -0.4
TPM3-212ENST00000368533 APOBRQ0VD83 1088 aa12.53□□□□□ -0.4
TPM3-212ENST00000368533 RRP12Q5JTH9 1297 aaKnown RBP12.53□□□□□ -0.4
TPM3-212ENST00000368533 USP48Q86UV5 1035 aa12.53□□□□□ -0.4
TPM3-212ENST00000368533 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.53□□□□□ -0.4
TPM3-212ENST00000368533 AKT1S1Q96B36 256 aa12.53□□□□□ -0.4
TPM3-212ENST00000368533 TOB2Q14106 344 aaPredicted RBP12.53□□□□□ -0.4
TPM3-212ENST00000368533 TTF1Q15361 905 aaPredicted RBP12.53□□□□□ -0.4
TPM3-212ENST00000368533 DDX11Q96FC9 970 aa12.53□□□□□ -0.4
TPM3-212ENST00000368533 CICQ96RK0 1608 aaPredicted RBP12.53□□□□□ -0.4
TPM3-212ENST00000368533 CYP2D7A0A087X1C5 515 aa12.53□□□□□ -0.4
TPM3-212ENST00000368533 PLSCR1O15162 318 aa12.53□□□□□ -0.4
TPM3-212ENST00000368533 FIBPO43427 364 aa12.53□□□□□ -0.4
TPM3-212ENST00000368533 ST3GAL1Q11201 340 aa12.53□□□□□ -0.4
TPM3-212ENST00000368533 UBE4AQ14139 1066 aa12.53□□□□□ -0.4
TPM3-212ENST00000368533 GRIK5Q16478 980 aa12.53□□□□□ -0.4
TPM3-212ENST00000368533 PAXIP1Q6ZW49 1069 aaPredicted RBP12.53□□□□□ -0.4
TPM3-212ENST00000368533 RTL9Q8NET4 1388 aa12.52□□□□□ -0.4
TPM3-212ENST00000368533 RXRAP19793 462 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms