RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 EXOC5O00471 708 aa21.11■□□□□ 0.97
UBQLN4-201ENST00000368309 STX1AQ16623 288 aa21.11■□□□□ 0.97
UBQLN4-201ENST00000368309 MYRIPQ8NFW9 859 aa21.11■□□□□ 0.97
UBQLN4-201ENST00000368309 KIF28PB7ZC32 967 aa21.11■□□□□ 0.97
UBQLN4-201ENST00000368309 SPEF2Q9C093 1822 aa21.1■□□□□ 0.97
UBQLN4-201ENST00000368309 B4E1Z4 1266 aa21.1■□□□□ 0.97
UBQLN4-201ENST00000368309 PDE6AP16499 860 aa21.1■□□□□ 0.97
UBQLN4-201ENST00000368309 NDUFA8P51970 172 aa21.1■□□□□ 0.97
UBQLN4-201ENST00000368309 MRPS27Q92552 414 aaKnown RBP21.1■□□□□ 0.97
UBQLN4-201ENST00000368309 NWD2Q9ULI1 1742 aa21.1■□□□□ 0.97
UBQLN4-201ENST00000368309 BECN2A8MW95 431 aa21.1■□□□□ 0.97
UBQLN4-201ENST00000368309 TTF1Q15361 905 aaPredicted RBP21.1■□□□□ 0.97
UBQLN4-201ENST00000368309 ADALQ6DHV7 355 aa21.1■□□□□ 0.97
UBQLN4-201ENST00000368309 ARID3AQ99856 593 aa21.1■□□□□ 0.97
UBQLN4-201ENST00000368309 FMR1NBQ8N0W7 255 aaPredicted RBP21.09■□□□□ 0.97
UBQLN4-201ENST00000368309 BCL9O00512 1426 aa21.09■□□□□ 0.97
UBQLN4-201ENST00000368309 CCDC144BQ3MJ40 725 aa21.09■□□□□ 0.97
UBQLN4-201ENST00000368309 MYSM1Q5VVJ2 828 aa21.09■□□□□ 0.97
UBQLN4-201ENST00000368309 ANGEL1Q9UNK9 670 aaKnown RBP21.09■□□□□ 0.97
UBQLN4-201ENST00000368309 CAVIN2O95810 425 aa21.08■□□□□ 0.97
UBQLN4-201ENST00000368309 AIDAQ96BJ3 306 aa21.08■□□□□ 0.97
UBQLN4-201ENST00000368309 PRIMPOLQ96LW4 560 aa21.08■□□□□ 0.97
UBQLN4-201ENST00000368309 ABCC12Q96J65 1359 aa21.08■□□□□ 0.97
UBQLN4-201ENST00000368309 UBE3CQ15386 1083 aa21.08■□□□□ 0.97
UBQLN4-201ENST00000368309 SYNE3Q6ZMZ3 975 aa21.08■□□□□ 0.97
UBQLN4-201ENST00000368309 PHKBQ93100 1093 aa21.08■□□□□ 0.97
UBQLN4-201ENST00000368309 MICU3Q86XE3 530 aa21.08■□□□□ 0.96
UBQLN4-201ENST00000368309 SEC31BQ9NQW1 1179 aa21.08■□□□□ 0.96
UBQLN4-201ENST00000368309 SPTLC2O15270 562 aa21.07■□□□□ 0.96
UBQLN4-201ENST00000368309 ZNF512BQ96KM6 892 aaPredicted RBP21.07■□□□□ 0.96
UBQLN4-201ENST00000368309 MYL10Q9BUA6 226 aa21.07■□□□□ 0.96
UBQLN4-201ENST00000368309 METAP2P50579 478 aaKnown RBP eCLIP21.07■□□□□ 0.96
UBQLN4-201ENST00000368309 PUM3Q15397 648 aaKnown RBP21.07■□□□□ 0.96
UBQLN4-201ENST00000368309 SUSD4Q5VX71 490 aa21.07■□□□□ 0.96
UBQLN4-201ENST00000368309 CACTINQ8WUQ7 758 aaKnown RBP21.07■□□□□ 0.96
UBQLN4-201ENST00000368309 LPIN2Q92539 896 aa21.07■□□□□ 0.96
UBQLN4-201ENST00000368309 STRBPQ96SI9 672 aaKnown RBP21.07■□□□□ 0.96
UBQLN4-201ENST00000368309 ANO10Q9NW15 660 aa21.07■□□□□ 0.96
UBQLN4-201ENST00000368309 CDC27P30260 824 aa21.06■□□□□ 0.96
UBQLN4-201ENST00000368309 MARCKSP29966 332 aaPredicted RBP21.06■□□□□ 0.96
UBQLN4-201ENST00000368309 KIF23Q02241 960 aaPredicted RBP21.06■□□□□ 0.96
UBQLN4-201ENST00000368309 ARID5BQ14865 1188 aa21.06■□□□□ 0.96
UBQLN4-201ENST00000368309 DHX40Q8IX18 779 aaKnown RBP21.06■□□□□ 0.96
UBQLN4-201ENST00000368309 ZNF34Q8IZ26 560 aa21.06■□□□□ 0.96
UBQLN4-201ENST00000368309 STK11IPQ8N1F8 1099 aa21.06■□□□□ 0.96
UBQLN4-201ENST00000368309 MAGEB6Q8N7X4 407 aa21.06■□□□□ 0.96
UBQLN4-201ENST00000368309 TCRBV5S4A2TA0A5A2 114 aa21.06■□□□□ 0.96
UBQLN4-201ENST00000368309 ARID4AP29374 1257 aaPredicted RBP21.06■□□□□ 0.96
UBQLN4-201ENST00000368309 IL6STP40189 918 aaPredicted RBP21.06■□□□□ 0.96
UBQLN4-201ENST00000368309 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.06■□□□□ 0.96
UBQLN4-201ENST00000368309 SPATA5Q8NB90 893 aa21.06■□□□□ 0.96
UBQLN4-201ENST00000368309 ALG1Q9BT22 464 aa21.06■□□□□ 0.96
UBQLN4-201ENST00000368309 ERVV-1B6SEH8 477 aa21.05■□□□□ 0.96
UBQLN4-201ENST00000368309 NFXL1Q6ZNB6 911 aa21.05■□□□□ 0.96
UBQLN4-201ENST00000368309 KCNG4Q8TDN1 519 aa21.05■□□□□ 0.96
UBQLN4-201ENST00000368309 POLR3EQ9NVU0 708 aa21.05■□□□□ 0.96
UBQLN4-201ENST00000368309 NEDD4P46934 1319 aa21.05■□□□□ 0.96
UBQLN4-201ENST00000368309 SH2B2O14492 632 aaPredicted RBP21.05■□□□□ 0.96
UBQLN4-201ENST00000368309 UQCRFS1P1P0C7P4 283 aa21.05■□□□□ 0.96
UBQLN4-201ENST00000368309 CTDSPL2Q05D32 466 aa21.05■□□□□ 0.96
UBQLN4-201ENST00000368309 AOPEPQ8N6M6 819 aa21.05■□□□□ 0.96
UBQLN4-201ENST00000368309 MPHOSPH8Q99549 860 aa21.05■□□□□ 0.96
UBQLN4-201ENST00000368309 UBE2Q2LH0YL09 131 aa21.05■□□□□ 0.96
UBQLN4-201ENST00000368309 RASGRF1Q13972 1273 aa21.05■□□□□ 0.96
UBQLN4-201ENST00000368309 APOA5Q6Q788 366 aa21.05■□□□□ 0.96
UBQLN4-201ENST00000368309 BIN1O00499 593 aa21.04■□□□□ 0.96
UBQLN4-201ENST00000368309 FGFR2P21802 821 aa21.04■□□□□ 0.96
UBQLN4-201ENST00000368309 ANO1Q5XXA6 986 aa21.04■□□□□ 0.96
UBQLN4-201ENST00000368309 BRAPQ7Z569 592 aa21.04■□□□□ 0.96
UBQLN4-201ENST00000368309 UBE2Q2Q8WVN8 375 aa21.04■□□□□ 0.96
UBQLN4-201ENST00000368309 ACSBG1Q96GR2 724 aa21.04■□□□□ 0.96
UBQLN4-201ENST00000368309 ARMT1Q9H993 441 aa21.04■□□□□ 0.96
UBQLN4-201ENST00000368309 A0A1W2PQ27 194 aa21.04■□□□□ 0.96
UBQLN4-201ENST00000368309 A0A1W2PQ64 194 aa21.04■□□□□ 0.96
UBQLN4-201ENST00000368309 A0A1W2PQD8 194 aa21.04■□□□□ 0.96
UBQLN4-201ENST00000368309 ABCA3Q99758 1704 aa21.04■□□□□ 0.96
UBQLN4-201ENST00000368309 AKAP11Q9UKA4 1901 aa21.04■□□□□ 0.96
UBQLN4-201ENST00000368309 MBD4O95243 580 aa21.03■□□□□ 0.96
UBQLN4-201ENST00000368309 YEATS4O95619 227 aa21.03■□□□□ 0.96
UBQLN4-201ENST00000368309 ZMYM6O95789 1325 aa21.03■□□□□ 0.96
UBQLN4-201ENST00000368309 CEP57L1Q8IYX8 460 aa21.03■□□□□ 0.96
UBQLN4-201ENST00000368309 FILIP1Q7Z7B0 1213 aa21.03■□□□□ 0.96
UBQLN4-201ENST00000368309 IGDCC4Q8TDY8 1250 aa21.03■□□□□ 0.96
UBQLN4-201ENST00000368309 C16orf45Q96MC5 204 aaPredicted RBP21.03■□□□□ 0.96
UBQLN4-201ENST00000368309 EPB41L4AQ9HCS5 686 aaPredicted RBP21.03■□□□□ 0.96
UBQLN4-201ENST00000368309 WDR19Q8NEZ3 1342 aa21.03■□□□□ 0.96
UBQLN4-201ENST00000368309 PRKAB2O43741 272 aa21.02■□□□□ 0.96
UBQLN4-201ENST00000368309 BCAMP50895 628 aa21.02■□□□□ 0.96
UBQLN4-201ENST00000368309 TMEM67Q5HYA8 995 aa21.02■□□□□ 0.96
UBQLN4-201ENST00000368309 IFNL3Q8IZI9 196 aa21.02■□□□□ 0.96
UBQLN4-201ENST00000368309 NAPBQ9H115 298 aa21.02■□□□□ 0.96
UBQLN4-201ENST00000368309 ZSWIM5Q9P217 1185 aa21.02■□□□□ 0.96
UBQLN4-201ENST00000368309 KIAA1468Q9P260 1216 aa21.02■□□□□ 0.96
UBQLN4-201ENST00000368309 MROH5Q6ZUA9 1318 aa21.02■□□□□ 0.96
UBQLN4-201ENST00000368309 WDHD1O75717 1129 aaPredicted RBP21.02■□□□□ 0.96
UBQLN4-201ENST00000368309 ZNF202O95125 648 aa21.02■□□□□ 0.96
UBQLN4-201ENST00000368309 SLC5A1P13866 664 aa21.02■□□□□ 0.96
UBQLN4-201ENST00000368309 ZBTB43O43298 467 aa21.02■□□□□ 0.96
UBQLN4-201ENST00000368309 DPCR1Q3MIW9 517 aa21.02■□□□□ 0.96
UBQLN4-201ENST00000368309 KRT40Q6A162 431 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms