RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 CCDC183Q5T5S1 534 aa20.55■□□□□ 0.88
LMNA-205ENST00000368299 NAA16Q6N069 864 aaPredicted RBP20.55■□□□□ 0.88
LMNA-205ENST00000368299 MINPP1Q9UNW1 487 aa20.55■□□□□ 0.88
LMNA-205ENST00000368299 SALL1Q9NSC2 1324 aa20.55■□□□□ 0.88
LMNA-205ENST00000368299 FAM182BQ5T319 152 aa20.55■□□□□ 0.88
LMNA-205ENST00000368299 ARHGEF1Q92888 912 aaKnown RBP20.55■□□□□ 0.88
LMNA-205ENST00000368299 DDX11Q96FC9 970 aa20.55■□□□□ 0.88
LMNA-205ENST00000368299 NAP1L2Q9ULW6 460 aaPredicted RBP20.55■□□□□ 0.88
LMNA-205ENST00000368299 PNPLA7Q6ZV29 1317 aa20.54■□□□□ 0.88
LMNA-205ENST00000368299 CTDNEP1O95476 244 aa20.54■□□□□ 0.88
LMNA-205ENST00000368299 CCT2P78371 535 aaKnown RBP20.54■□□□□ 0.88
LMNA-205ENST00000368299 PPP1R9BQ96SB3 815 aa20.54■□□□□ 0.88
LMNA-205ENST00000368299 LRP2BPQ9P2M1 347 aa20.54■□□□□ 0.88
LMNA-205ENST00000368299 MBD4O95243 580 aa20.53■□□□□ 0.88
LMNA-205ENST00000368299 RPS8P62241 208 aaKnown RBP20.53■□□□□ 0.88
LMNA-205ENST00000368299 TAF1LQ8IZX4 1826 aa20.53■□□□□ 0.88
LMNA-205ENST00000368299 ANTXR2P58335 489 aa20.53■□□□□ 0.88
LMNA-205ENST00000368299 TRAPPC3LQ5T215 181 aa20.53■□□□□ 0.88
LMNA-205ENST00000368299 CELF1Q92879 486 aaKnown RBP20.53■□□□□ 0.88
LMNA-205ENST00000368299 NACAP1Q9BZK3 213 aa20.53■□□□□ 0.88
LMNA-205ENST00000368299 NBPF3Q9H094 633 aa20.53■□□□□ 0.88
LMNA-205ENST00000368299 COL4A1P02462 1669 aa20.53■□□□□ 0.88
LMNA-205ENST00000368299 RFC4P35249 363 aa20.52■□□□□ 0.88
LMNA-205ENST00000368299 SMIM5Q71RC9 77 aa20.52■□□□□ 0.88
LMNA-205ENST00000368299 SEPT12Q8IYM1 358 aa20.52■□□□□ 0.88
LMNA-205ENST00000368299 IFNL3Q8IZI9 196 aa20.52■□□□□ 0.88
LMNA-205ENST00000368299 BCL11BQ9C0K0 894 aaPredicted RBP20.52■□□□□ 0.88
LMNA-205ENST00000368299 ANKRD2Q9GZV1 360 aa20.52■□□□□ 0.88
LMNA-205ENST00000368299 NAPBQ9H115 298 aa20.52■□□□□ 0.88
LMNA-205ENST00000368299 SBF2Q86WG5 1849 aa20.52■□□□□ 0.88
LMNA-205ENST00000368299 A0A1B0GUL6 1792 aa20.52■□□□□ 0.88
LMNA-205ENST00000368299 CASZ1Q86V15 1759 aa20.52■□□□□ 0.88
LMNA-205ENST00000368299 HSPA1LP34931 641 aa20.52■□□□□ 0.88
LMNA-205ENST00000368299 RESTQ13127 1097 aa20.52■□□□□ 0.88
LMNA-205ENST00000368299 TBC1D10CQ8IV04 446 aa20.52■□□□□ 0.88
LMNA-205ENST00000368299 RBSNQ9H1K0 784 aa20.52■□□□□ 0.88
LMNA-205ENST00000368299 DENND2AQ9ULE3 1009 aa20.52■□□□□ 0.88
LMNA-205ENST00000368299 C4BP0C0L5 1744 aa20.51■□□□□ 0.87
LMNA-205ENST00000368299 SEMA3EO15041 775 aa20.51■□□□□ 0.87
LMNA-205ENST00000368299 VPS37DQ86XT2 251 aa20.51■□□□□ 0.87
LMNA-205ENST00000368299 NCOA5Q9HCD5 579 aaKnown RBP20.51■□□□□ 0.87
LMNA-205ENST00000368299 KLF18A0A0U1RQI7 1052 aa20.51■□□□□ 0.87
LMNA-205ENST00000368299 ADRA2BP18089 450 aa20.51■□□□□ 0.87
LMNA-205ENST00000368299 TMEM87BQ96K49 555 aa20.51■□□□□ 0.87
LMNA-205ENST00000368299 TSPY26PQ9H489 355 aa20.51■□□□□ 0.87
LMNA-205ENST00000368299 ANGEL1Q9UNK9 670 aaKnown RBP20.51■□□□□ 0.87
LMNA-205ENST00000368299 GYG1P46976 350 aa20.5■□□□□ 0.87
LMNA-205ENST00000368299 TTC6Q86TZ1 520 aa20.5■□□□□ 0.87
LMNA-205ENST00000368299 CNNM2Q9H8M5 875 aa20.5■□□□□ 0.87
LMNA-205ENST00000368299 ARMT1Q9H993 441 aa20.5■□□□□ 0.87
LMNA-205ENST00000368299 CFAP45Q9UL16 551 aa20.5■□□□□ 0.87
LMNA-205ENST00000368299 GOLGA8BA8MQT2 603 aa20.5■□□□□ 0.87
LMNA-205ENST00000368299 SPATA32Q96LK8 384 aa20.5■□□□□ 0.87
LMNA-205ENST00000368299 EPB41L4AQ9HCS5 686 aaPredicted RBP20.5■□□□□ 0.87
LMNA-205ENST00000368299 CARMIL3Q8ND23 1372 aa20.49■□□□□ 0.87
LMNA-205ENST00000368299 GSG1L2A8MUP6 293 aa20.49■□□□□ 0.87
LMNA-205ENST00000368299 GPHNQ9NQX3 736 aaPredicted RBP20.49■□□□□ 0.87
LMNA-205ENST00000368299 PDS5AQ29RF7 1337 aaKnown RBP20.49■□□□□ 0.87
LMNA-205ENST00000368299 ATL3Q6DD88 541 aa20.48■□□□□ 0.87
LMNA-205ENST00000368299 FAM173BQ6P4H8 233 aa20.48■□□□□ 0.87
LMNA-205ENST00000368299 RGS22Q8NE09 1264 aa20.48■□□□□ 0.87
LMNA-205ENST00000368299 FAM84BQ96KN1 310 aaPredicted RBP20.48■□□□□ 0.87
LMNA-205ENST00000368299 SLC4A4Q9Y6R1 1079 aa20.48■□□□□ 0.87
LMNA-205ENST00000368299 NPHP1O15259 732 aa20.48■□□□□ 0.87
LMNA-205ENST00000368299 FBXO33Q7Z6M2 555 aa20.48■□□□□ 0.87
LMNA-205ENST00000368299 HPS5Q9UPZ3 1129 aa20.48■□□□□ 0.87
LMNA-205ENST00000368299 SH2B2O14492 632 aaPredicted RBP20.47■□□□□ 0.87
LMNA-205ENST00000368299 CPLX1O14810 134 aa20.47■□□□□ 0.87
LMNA-205ENST00000368299 CYP7A1P22680 504 aa20.47■□□□□ 0.87
LMNA-205ENST00000368299 FAM196AQ6ZSG2 479 aa20.47■□□□□ 0.87
LMNA-205ENST00000368299 AMIGO3Q86WK7 504 aa20.47■□□□□ 0.87
LMNA-205ENST00000368299 LCORLQ8N3X6 602 aa20.47■□□□□ 0.87
LMNA-205ENST00000368299 LEO1Q8WVC0 666 aaPredicted RBP20.47■□□□□ 0.87
LMNA-205ENST00000368299 KRT23Q9C075 422 aa20.47■□□□□ 0.87
LMNA-205ENST00000368299 ABCF2Q9UG63 623 aa20.47■□□□□ 0.87
LMNA-205ENST00000368299 C4AP0C0L4 1744 aa20.47■□□□□ 0.87
LMNA-205ENST00000368299 GOLGA6L4A6NEF3 574 aa20.47■□□□□ 0.87
LMNA-205ENST00000368299 ZBTB22O15209 634 aa20.47■□□□□ 0.87
LMNA-205ENST00000368299 TDO2P48775 406 aa20.47■□□□□ 0.87
LMNA-205ENST00000368299 RAI14Q9P0K7 980 aa20.47■□□□□ 0.87
LMNA-205ENST00000368299 IQSEC3Q9UPP2 1182 aaPredicted RBP20.47■□□□□ 0.87
LMNA-205ENST00000368299 B4E1Z4 1266 aa20.46■□□□□ 0.87
LMNA-205ENST00000368299 AKNAD1Q5T1N1 836 aa20.46■□□□□ 0.87
LMNA-205ENST00000368299 TMED8Q6PL24 325 aaPredicted RBP20.46■□□□□ 0.87
LMNA-205ENST00000368299 CYB5R4Q7L1T6 521 aa20.46■□□□□ 0.87
LMNA-205ENST00000368299 TIAM2Q8IVF5 1701 aa20.46■□□□□ 0.87
LMNA-205ENST00000368299 TAF1P21675 1872 aa20.46■□□□□ 0.87
LMNA-205ENST00000368299 NEDD4P46934 1319 aa20.46■□□□□ 0.87
LMNA-205ENST00000368299 FDPSP14324 419 aaKnown RBP20.45■□□□□ 0.86
LMNA-205ENST00000368299 TM4SF1P30408 202 aa20.45■□□□□ 0.86
LMNA-205ENST00000368299 MFSD6Q6ZSS7 791 aa20.45■□□□□ 0.86
LMNA-205ENST00000368299 STAG1Q8WVM7 1258 aa20.45■□□□□ 0.86
LMNA-205ENST00000368299 NAP1L5Q96NT1 182 aaPredicted RBP20.45■□□□□ 0.86
LMNA-205ENST00000368299 MTA3Q9BTC8 594 aa20.45■□□□□ 0.86
LMNA-205ENST00000368299 RNF41Q9H4P4 317 aaPredicted RBP20.45■□□□□ 0.86
LMNA-205ENST00000368299 TFIP11Q9UBB9 837 aaKnown RBP20.45■□□□□ 0.86
LMNA-205ENST00000368299 CDKL5O76039 1030 aa20.44■□□□□ 0.86
LMNA-205ENST00000368299 HMGB2P26583 209 aaKnown RBP20.44■□□□□ 0.86
LMNA-205ENST00000368299 LIFRP42702 1097 aa20.44■□□□□ 0.86
LMNA-205ENST00000368299 SGMS1Q86VZ5 419 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms