RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 KRBA2Q6ZNG9 492 aa15.09■□□□□ 0.01
PTPRK-204ENST00000368210 TRIM47Q96LD4 638 aa15.09■□□□□ 0.01
PTPRK-204ENST00000368210 ENOX2Q16206 610 aaKnown RBP15.08■□□□□ 0.01
PTPRK-204ENST00000368210 BEND3Q5T5X7 828 aa15.08■□□□□ 0.01
PTPRK-204ENST00000368210 ANKRD2Q9GZV1 360 aa15.08■□□□□ 0.01
PTPRK-204ENST00000368210 SLU7O95391 586 aaKnown RBP15.08■□□□□ 0
PTPRK-204ENST00000368210 U2AF2P26368 475 aaKnown RBP eCLIP15.08■□□□□ 09e-7■■□□□ 13.8
PTPRK-204ENST00000368210 CALML3P27482 149 aa15.08■□□□□ 0
PTPRK-204ENST00000368210 LMOD1P29536 600 aaPredicted RBP15.08■□□□□ 0
PTPRK-204ENST00000368210 RRAGBQ5VZM2 374 aa15.08■□□□□ 0
PTPRK-204ENST00000368210 FAM114A1Q8IWE2 563 aa15.08■□□□□ 0
PTPRK-204ENST00000368210 F8W031 263 aaPredicted RBP15.08■□□□□ 0
PTPRK-204ENST00000368210 PHKG2P15735 406 aa15.08■□□□□ 0
PTPRK-204ENST00000368210 STAT6P42226 847 aa15.08■□□□□ 0
PTPRK-204ENST00000368210 CCDC40Q4G0X9 1142 aa15.08■□□□□ 0
PTPRK-204ENST00000368210 IGSF1Q8N6C5 1336 aa15.08■□□□□ 0
PTPRK-204ENST00000368210 ROBO2Q9HCK4 1378 aa15.08■□□□□ 0
PTPRK-204ENST00000368210 GPAA1O43292 621 aa15.08■□□□□ 0
PTPRK-204ENST00000368210 ATP5JP18859 108 aa15.08■□□□□ 0
PTPRK-204ENST00000368210 LLPHQ9BRT6 129 aaKnown RBP15.08■□□□□ 0
PTPRK-204ENST00000368210 BCCIPQ9P287 314 aaKnown RBP eCLIP15.08■□□□□ 0
PTPRK-204ENST00000368210 B4E1Z4 1266 aa15.07■□□□□ 0
PTPRK-204ENST00000368210 EHMT1Q9H9B1 1298 aa15.07■□□□□ 0
PTPRK-204ENST00000368210 CDC42BPAQ5VT25 1732 aa15.07■□□□□ 0
PTPRK-204ENST00000368210 FAM173BQ6P4H8 233 aa15.07■□□□□ 0
PTPRK-204ENST00000368210 SLAIN2Q9P270 581 aa15.07■□□□□ 0
PTPRK-204ENST00000368210 MATR3P43243 847 aaKnown RBP eCLIP15.07■□□□□ 02e-6■■■□□ 19
PTPRK-204ENST00000368210 DHX58Q96C10 678 aa15.07■□□□□ 0
PTPRK-204ENST00000368210 TM6SF1Q9BZW5 370 aa15.07■□□□□ 0
PTPRK-204ENST00000368210 LRRC27Q9C0I9 530 aa15.07■□□□□ 0
PTPRK-204ENST00000368210 TMX1Q9H3N1 280 aa15.07■□□□□ 0
PTPRK-204ENST00000368210 CHD1O14646 1710 aa15.07■□□□□ 0
PTPRK-204ENST00000368210 PRR36Q9H6K5 1346 aa15.07■□□□□ 0
PTPRK-204ENST00000368210 GNG11P61952 73 aa15.07■□□□□ 0
PTPRK-204ENST00000368210 SPAG1Q07617 926 aa15.07■□□□□ 0
PTPRK-204ENST00000368210 EFCC1Q9HA90 598 aa15.07■□□□□ 0
PTPRK-204ENST00000368210 EXOC1Q9NV70 894 aa15.07■□□□□ 0
PTPRK-204ENST00000368210 ERVV-2B6SEH9 535 aa15.06■□□□□ 0
PTPRK-204ENST00000368210 TUBB4AP04350 444 aa15.06■□□□□ 0
PTPRK-204ENST00000368210 EAF2Q96CJ1 260 aaPredicted RBP15.06■□□□□ 0
PTPRK-204ENST00000368210 MRVI1Q9Y6F6 885 aa15.06■□□□□ 0
PTPRK-204ENST00000368210 SHROOM2Q13796 1616 aa15.06■□□□□ 0
PTPRK-204ENST00000368210 EBAG9O00559 213 aa15.06■□□□□ 0
PTPRK-204ENST00000368210 NAPAP54920 295 aa15.06■□□□□ 0
PTPRK-204ENST00000368210 CNKSR2Q8WXI2 1034 aa15.06■□□□□ 0
PTPRK-204ENST00000368210 TMEM87BQ96K49 555 aa15.06■□□□□ 0
PTPRK-204ENST00000368210 ZKSCAN3Q9BRR0 538 aa15.06■□□□□ 0
PTPRK-204ENST00000368210 ZC3H12CQ9C0D7 883 aaKnown RBP15.06■□□□□ 0
PTPRK-204ENST00000368210 NCOA5Q9HCD5 579 aaKnown RBP15.06■□□□□ 0
PTPRK-204ENST00000368210 KDRP35968 1356 aa15.06■□□□□ 0
PTPRK-204ENST00000368210 ZNF853P0CG23 659 aa15.06■□□□□ 0
PTPRK-204ENST00000368210 FMNL3Q8IVF7 1028 aa15.06■□□□□ 0
PTPRK-204ENST00000368210 DENND2AQ9ULE3 1009 aa15.06■□□□□ 0
PTPRK-204ENST00000368210 USP6P35125 1406 aa15.06■□□□□ 0
PTPRK-204ENST00000368210 HECW2Q9P2P5 1572 aa15.06■□□□□ 0
PTPRK-204ENST00000368210 IBTKQ9P2D0 1353 aaPredicted RBP15.06■□□□□ 0
PTPRK-204ENST00000368210 LDHBP07195 334 aaKnown RBP15.06■□□□□ 0
PTPRK-204ENST00000368210 PLCG2P16885 1265 aa15.06■□□□□ 0
PTPRK-204ENST00000368210 CTAGE1Q96RT6 745 aa15.06■□□□□ 0
PTPRK-204ENST00000368210 ANGEL1Q9UNK9 670 aaKnown RBP15.06■□□□□ 0
PTPRK-204ENST00000368210 PICALMQ13492 652 aa15.05■□□□□ 0
PTPRK-204ENST00000368210 TCERG1LQ5VWI1 586 aa15.05■□□□□ 0
PTPRK-204ENST00000368210 EDC3Q96F86 508 aaKnown RBP15.05■□□□□ 0
PTPRK-204ENST00000368210 RBSNQ9H1K0 784 aa15.05■□□□□ 0
PTPRK-204ENST00000368210 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.05■□□□□ 0
PTPRK-204ENST00000368210 PAFAH1B1P43034 410 aa15.05■□□□□ 0
PTPRK-204ENST00000368210 TET3O43151 1660 aa15.05■□□□□ 0
PTPRK-204ENST00000368210 GNPATO15228 680 aa15.05■□□□□ -0
PTPRK-204ENST00000368210 KRT2P35908 639 aa15.05■□□□□ -0
PTPRK-204ENST00000368210 FAM160A1Q05DH4 1040 aa15.05■□□□□ -0
PTPRK-204ENST00000368210 A0A1B0GVL5 298 aa15.05■□□□□ -0
PTPRK-204ENST00000368210 TCIRG1Q13488 830 aa15.05■□□□□ -0
PTPRK-204ENST00000368210 LPIN2Q92539 896 aa15.05■□□□□ -0
PTPRK-204ENST00000368210 SRRTQ9BXP5 876 aaKnown RBP15.05■□□□□ -0
PTPRK-204ENST00000368210 IQGAP3Q86VI3 1631 aa15.04■□□□□ -0
PTPRK-204ENST00000368210 JAG2Q9Y219 1238 aa15.04■□□□□ -0
PTPRK-204ENST00000368210 ERCC6L2Q5T890 1561 aa15.04■□□□□ -0
PTPRK-204ENST00000368210 NLRP1Q9C000 1473 aa15.04■□□□□ -0
PTPRK-204ENST00000368210 PSMA7O14818 248 aa15.04■□□□□ -0
PTPRK-204ENST00000368210 RSRC1Q96IZ7 334 aaKnown RBP15.04■□□□□ -0
PTPRK-204ENST00000368210 ARMT1Q9H993 441 aa15.04■□□□□ -0
PTPRK-204ENST00000368210 TRIM21P19474 475 aaKnown RBP15.04■□□□□ -0
PTPRK-204ENST00000368210 KRI1Q8N9T8 703 aaKnown RBP15.04■□□□□ -0
PTPRK-204ENST00000368210 C6orf50Q9HD87 102 aa15.04■□□□□ -0
PTPRK-204ENST00000368210 DNA2P51530 1060 aa15.03■□□□□ -0
PTPRK-204ENST00000368210 LMBRD1Q9NUN5 540 aa15.03■□□□□ -0
PTPRK-204ENST00000368210 SSH2Q76I76 1423 aa15.03■□□□□ -0
PTPRK-204ENST00000368210 ABCC3O15438 1527 aa15.03■□□□□ -0
PTPRK-204ENST00000368210 DTNBO60941 627 aa15.03■□□□□ -0
PTPRK-204ENST00000368210 BRD1O95696 1058 aa15.03■□□□□ -0
PTPRK-204ENST00000368210 ZAP70P43403 619 aa15.03■□□□□ -0
PTPRK-204ENST00000368210 ARHGEF25Q86VW2 580 aa15.03■□□□□ -0
PTPRK-204ENST00000368210 CEP57Q86XR8 500 aa15.03■□□□□ -0
PTPRK-204ENST00000368210 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.03■□□□□ -0
PTPRK-204ENST00000368210 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.03■□□□□ -0
PTPRK-204ENST00000368210 ADCY10Q96PN6 1610 aa15.03■□□□□ -0
PTPRK-204ENST00000368210 CERS3Q8IU89 383 aa15.03■□□□□ -0
PTPRK-204ENST00000368210 CCDC87Q9NVE4 849 aa15.03■□□□□ -0
PTPRK-204ENST00000368210 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.03■□□□□ -0
PTPRK-204ENST00000368210 LMTK3Q96Q04 1460 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms