RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 MED23Q9ULK4 1368 aa13.96□□□□□ -0.17
CSNK1E-202ENST00000366216 ARAP2Q8WZ64 1704 aa13.96□□□□□ -0.17
CSNK1E-202ENST00000366216 UNCXA6NJT0 531 aa13.96□□□□□ -0.17
CSNK1E-202ENST00000366216 FBXW7Q969H0 707 aa13.96□□□□□ -0.17
CSNK1E-202ENST00000366216 PTPN18Q99952 460 aa13.96□□□□□ -0.17
CSNK1E-202ENST00000366216 RNF39Q9H2S5 420 aa13.96□□□□□ -0.17
CSNK1E-202ENST00000366216 PHAXQ9H814 394 aaKnown RBP13.96□□□□□ -0.17
CSNK1E-202ENST00000366216 F6X3S4 739 aa13.95□□□□□ -0.18
CSNK1E-202ENST00000366216 MYCP01106 439 aaPredicted RBP13.95□□□□□ -0.18
CSNK1E-202ENST00000366216 HSP90B1P14625 803 aaKnown RBP13.95□□□□□ -0.18
CSNK1E-202ENST00000366216 ARHGEF6Q15052 776 aa13.95□□□□□ -0.18
CSNK1E-202ENST00000366216 CCDC152Q4G0S7 254 aa13.95□□□□□ -0.18
CSNK1E-202ENST00000366216 STRIP1Q5VSL9 837 aa13.95□□□□□ -0.18
CSNK1E-202ENST00000366216 DEFB129Q9H1M3 183 aa13.95□□□□□ -0.18
CSNK1E-202ENST00000366216 PPP1R12BO60237 982 aaPredicted RBP13.94□□□□□ -0.18
CSNK1E-202ENST00000366216 SLC4A10Q6U841 1118 aa13.94□□□□□ -0.18
CSNK1E-202ENST00000366216 ANKRD18AQ8IVF6 992 aa13.94□□□□□ -0.18
CSNK1E-202ENST00000366216 SMC5Q8IY18 1101 aa13.94□□□□□ -0.18
CSNK1E-202ENST00000366216 DPF3Q92784 378 aa13.94□□□□□ -0.18
CSNK1E-202ENST00000366216 MINPP1Q9UNW1 487 aa13.94□□□□□ -0.18
CSNK1E-202ENST00000366216 TESPA1A2RU30 521 aaPredicted RBP13.93□□□□□ -0.18
CSNK1E-202ENST00000366216 PCCAP05165 728 aaPredicted RBP13.93□□□□□ -0.18
CSNK1E-202ENST00000366216 MNX1P50219 401 aaPredicted RBP13.93□□□□□ -0.18
CSNK1E-202ENST00000366216 KIAA0825Q8IV33 1275 aa13.93□□□□□ -0.18
CSNK1E-202ENST00000366216 RPAP2Q8IXW5 612 aaPredicted RBP13.93□□□□□ -0.18
CSNK1E-202ENST00000366216 DNAAF4Q8WXU2 420 aa13.93□□□□□ -0.18
CSNK1E-202ENST00000366216 MYD88Q99836 296 aa13.93□□□□□ -0.18
CSNK1E-202ENST00000366216 PDE8AO60658 829 aa13.92□□□□□ -0.18
CSNK1E-202ENST00000366216 GNAI3P08754 354 aa13.92□□□□□ -0.18
CSNK1E-202ENST00000366216 CERS5Q8N5B7 392 aa13.92□□□□□ -0.18
CSNK1E-202ENST00000366216 SH3TC2Q8TF17 1288 aa13.92□□□□□ -0.18
CSNK1E-202ENST00000366216 COA1Q9GZY4 146 aa13.92□□□□□ -0.18
CSNK1E-202ENST00000366216 PRO3102Q9H379 93 aa13.92□□□□□ -0.18
CSNK1E-202ENST00000366216 PPP2R3BQ9Y5P8 575 aa13.92□□□□□ -0.18
CSNK1E-202ENST00000366216 PI4KAP2A4QPH2 592 aa13.91□□□□□ -0.18
CSNK1E-202ENST00000366216 DDX58O95786 925 aaKnown RBP13.91□□□□□ -0.18
CSNK1E-202ENST00000366216 IREB2P48200 963 aaKnown RBP13.91□□□□□ -0.18
CSNK1E-202ENST00000366216 SUPT20HL1Q3ZLR7 823 aa13.91□□□□□ -0.18
CSNK1E-202ENST00000366216 TTLL5Q6EMB2 1281 aa13.91□□□□□ -0.18
CSNK1E-202ENST00000366216 KSR2Q6VAB6 950 aa13.91□□□□□ -0.18
CSNK1E-202ENST00000366216 ANKRD44Q8N8A2 993 aa13.91□□□□□ -0.18
CSNK1E-202ENST00000366216 PI4KAP1Q8N8J0 262 aa13.91□□□□□ -0.18
CSNK1E-202ENST00000366216 MEIS3Q99687 375 aa13.91□□□□□ -0.18
CSNK1E-202ENST00000366216 GREM2Q9H772 168 aa13.91□□□□□ -0.18
CSNK1E-202ENST00000366216 IRS2Q9Y4H2 1338 aa13.9□□□□□ -0.18
CSNK1E-202ENST00000366216 SNAP23O00161 211 aa13.9□□□□□ -0.18
CSNK1E-202ENST00000366216 BEND3Q5T5X7 828 aa13.9□□□□□ -0.18
CSNK1E-202ENST00000366216 RIC3Q7Z5B4 369 aa13.9□□□□□ -0.18
CSNK1E-202ENST00000366216 SIRT2Q8IXJ6 389 aa13.9□□□□□ -0.18
CSNK1E-202ENST00000366216 ANKRD13AQ8IZ07 590 aa13.9□□□□□ -0.18
CSNK1E-202ENST00000366216 TTLL11Q8NHH1 800 aa13.9□□□□□ -0.18
CSNK1E-202ENST00000366216 SRCIN1Q9C0H9 1055 aa13.9□□□□□ -0.18
CSNK1E-202ENST00000366216 C1orf115Q9H7X2 142 aa13.9□□□□□ -0.18
CSNK1E-202ENST00000366216 USP2O75604 605 aaPredicted RBP13.89□□□□□ -0.19
CSNK1E-202ENST00000366216 ALDH1L1O75891 902 aa13.89□□□□□ -0.19
CSNK1E-202ENST00000366216 GNAI2P04899 355 aa13.89□□□□□ -0.19
CSNK1E-202ENST00000366216 C1QBPQ07021 282 aaKnown RBP13.89□□□□□ -0.19
CSNK1E-202ENST00000366216 DLGAP5Q15398 846 aa13.89□□□□□ -0.19
CSNK1E-202ENST00000366216 TAF1CQ15572 869 aaPredicted RBP13.89□□□□□ -0.19
CSNK1E-202ENST00000366216 NBPF12Q5TAG4 269 aaPredicted RBP13.89□□□□□ -0.19
CSNK1E-202ENST00000366216 CEP85Q6P2H3 762 aa13.89□□□□□ -0.19
CSNK1E-202ENST00000366216 CDAN1Q8IWY9 1227 aa13.89□□□□□ -0.19
CSNK1E-202ENST00000366216 CCDC191Q8NCU4 936 aa13.89□□□□□ -0.19
CSNK1E-202ENST00000366216 SHISA4Q96DD7 197 aa13.89□□□□□ -0.19
CSNK1E-202ENST00000366216 MS4A4AQ96JQ5 239 aa13.89□□□□□ -0.19
CSNK1E-202ENST00000366216 CDC5LQ99459 802 aaKnown RBP13.89□□□□□ -0.19
CSNK1E-202ENST00000366216 ZFYVE28Q9HCC9 887 aa13.89□□□□□ -0.19
CSNK1E-202ENST00000366216 AK9Q5TCS8 1911 aa13.89□□□□□ -0.19
CSNK1E-202ENST00000366216 ZNF804BA4D1E1 1349 aa13.89□□□□□ -0.19
CSNK1E-202ENST00000366216 IGKV5-2P06315 115 aa13.88□□□□□ -0.19
CSNK1E-202ENST00000366216 CTSWP56202 376 aa13.88□□□□□ -0.19
CSNK1E-202ENST00000366216 GTF2IP78347 998 aa13.88□□□□□ -0.19
CSNK1E-202ENST00000366216 MTMR14Q8NCE2 650 aa13.88□□□□□ -0.19
CSNK1E-202ENST00000366216 OPTNQ96CV9 577 aa13.88□□□□□ -0.19
CSNK1E-202ENST00000366216 ELP3Q9H9T3 547 aa13.88□□□□□ -0.19
CSNK1E-202ENST00000366216 BSDC1Q9NW68 430 aaPredicted RBP13.88□□□□□ -0.19
CSNK1E-202ENST00000366216 DOCK3Q8IZD9 2030 aa13.88□□□□□ -0.19
CSNK1E-202ENST00000366216 A0A1W2PPC1 479 aa13.87□□□□□ -0.19
CSNK1E-202ENST00000366216 SOX1O00570 391 aaPredicted RBP13.87□□□□□ -0.19
CSNK1E-202ENST00000366216 MYO1BO43795 1136 aa13.87□□□□□ -0.19
CSNK1E-202ENST00000366216 NUCB1Q02818 461 aa13.87□□□□□ -0.19
CSNK1E-202ENST00000366216 SKAP1Q86WV1 359 aa13.87□□□□□ -0.19
CSNK1E-202ENST00000366216 BRI3BPQ8WY22 251 aa13.87□□□□□ -0.19
CSNK1E-202ENST00000366216 PRMT6Q96LA8 375 aaPredicted RBP13.87□□□□□ -0.19
CSNK1E-202ENST00000366216 HTATIP2Q9BUP3 242 aa13.87□□□□□ -0.19
CSNK1E-202ENST00000366216 METTL22Q9BUU2 404 aaPredicted RBP13.87□□□□□ -0.19
CSNK1E-202ENST00000366216 ARHGAP39Q9C0H5 1083 aa13.87□□□□□ -0.19
CSNK1E-202ENST00000366216 USP44Q9H0E7 712 aa13.87□□□□□ -0.19
CSNK1E-202ENST00000366216 CWC25Q9NXE8 425 aaPredicted RBP13.87□□□□□ -0.19
CSNK1E-202ENST00000366216 MAP3K2Q9Y2U5 619 aa13.87□□□□□ -0.19
CSNK1E-202ENST00000366216 CLRN2A0PK11 232 aa13.86□□□□□ -0.19
CSNK1E-202ENST00000366216 HMMRO75330 724 aa13.86□□□□□ -0.19
CSNK1E-202ENST00000366216 GNRH1P01148 92 aa13.86□□□□□ -0.19
CSNK1E-202ENST00000366216 LACTBP83111 547 aaPredicted RBP13.86□□□□□ -0.19
CSNK1E-202ENST00000366216 KIF22Q14807 665 aa13.86□□□□□ -0.19
CSNK1E-202ENST00000366216 UBE2Q1Q7Z7E8 422 aa13.86□□□□□ -0.19
CSNK1E-202ENST00000366216 LINS1Q8NG48 757 aa13.86□□□□□ -0.19
CSNK1E-202ENST00000366216 NKX2-3Q8TAU0 364 aa13.86□□□□□ -0.19
CSNK1E-202ENST00000366216 DCTPP1Q9H773 170 aa13.86□□□□□ -0.19
CSNK1E-202ENST00000366216 NR2E3Q9Y5X4 410 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms