RNA–Protein interactions for RNA: ENST00000361332.8

CTNND1-202, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-202ENST00000361332 CIB2O75838 187 aa9.35□□□□□ -0.91
CTNND1-202ENST00000361332 HMGB1P09429 215 aaKnown RBP9.35□□□□□ -0.91
CTNND1-202ENST00000361332 CLUL1Q15846 466 aa9.35□□□□□ -0.91
CTNND1-202ENST00000361332 AFAP1L1Q8TED9 768 aa9.35□□□□□ -0.91
CTNND1-202ENST00000361332 CAPZA3Q96KX2 299 aa9.35□□□□□ -0.91
CTNND1-202ENST00000361332 NBPF3Q9H094 633 aa9.35□□□□□ -0.91
CTNND1-202ENST00000361332 CABP1Q9NZU7 370 aa9.35□□□□□ -0.91
CTNND1-202ENST00000361332 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.35□□□□□ -0.91
CTNND1-202ENST00000361332 RRAGDQ9NQL2 400 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-202ENST00000361332 ZNF853P0CG23 659 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 PTGS1P23219 599 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 RRS1Q15050 365 aaKnown RBP9.34□□□□□ -0.91
CTNND1-202ENST00000361332 SKIV2LQ15477 1246 aaKnown RBP9.34□□□□□ -0.91
CTNND1-202ENST00000361332 ERCC6LQ2NKX8 1250 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 PRR16Q569H4 304 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 HSP90AA4PQ58FG1 418 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 FMNL3Q8IVF7 1028 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 CCDC170Q8IYT3 715 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 FNBP1Q96RU3 617 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 MYCBPQ99417 103 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-202ENST00000361332 TLDC2A0PJX2 215 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 NDUFAB1O14561 156 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 PDE1CQ14123 709 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-202ENST00000361332 MAP7Q14244 749 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 RRAGBQ5VZM2 374 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 RNF217Q8TC41 542 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 IFT81Q8WYA0 676 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 IARSP41252 1262 aaKnown RBP9.34□□□□□ -0.91
CTNND1-202ENST00000361332 STAT6P42226 847 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 ITIH3Q06033 890 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 TRPC3Q13507 836 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 KANK3Q6NY19 840 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 KIF1BPQ96EK5 621 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 SPATA17Q96L03 361 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 IFT74Q96LB3 600 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 FAM193BQ96PV7 902 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-202ENST00000361332 ZNF692Q9BU19 519 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-202ENST00000361332 CCDC8Q9H0W5 538 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-202ENST00000361332 MIS18AQ9NYP9 233 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 HMGXB3Q12766 1538 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 GNAT3A8MTJ3 354 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 TUBBP07437 444 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 NAPAP54920 295 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 USP48Q86UV5 1035 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 MICU3Q86XE3 530 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 CTAGE1Q96RT6 745 aa9.34□□□□□ -0.91
CTNND1-202ENST00000361332 CAMSAP2Q08AD1 1489 aa9.34□□□□□ -0.92
CTNND1-202ENST00000361332 GCKP35557 465 aa9.33□□□□□ -0.92
CTNND1-202ENST00000361332 NFE2L2Q16236 605 aa9.33□□□□□ -0.92
CTNND1-202ENST00000361332 WDR44Q5JSH3 913 aa9.33□□□□□ -0.92
CTNND1-202ENST00000361332 LRCH2Q5VUJ6 765 aa9.33□□□□□ -0.92
CTNND1-202ENST00000361332 SPDYE1Q8NFV5 336 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-202ENST00000361332 DNAJC25Q9H1X3 360 aa9.33□□□□□ -0.92
CTNND1-202ENST00000361332 SNRKQ9NRH2 765 aa9.33□□□□□ -0.92
CTNND1-202ENST00000361332 VAV2P52735 878 aa9.33□□□□□ -0.92
CTNND1-202ENST00000361332 RBBP5Q15291 538 aaKnown RBP9.33□□□□□ -0.92
CTNND1-202ENST00000361332 LDHAL6AQ6ZMR3 332 aa9.33□□□□□ -0.92
CTNND1-202ENST00000361332 AOPEPQ8N6M6 819 aa9.33□□□□□ -0.92
CTNND1-202ENST00000361332 USHBP1Q8N6Y0 703 aa9.33□□□□□ -0.92
CTNND1-202ENST00000361332 ERO1AQ96HE7 468 aa9.33□□□□□ -0.92
CTNND1-202ENST00000361332 CD2APQ9Y5K6 639 aa9.33□□□□□ -0.92
CTNND1-202ENST00000361332 NBPF7P0C2Y1 421 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-202ENST00000361332 XPAP23025 273 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-202ENST00000361332 SDCCAG8Q86SQ7 713 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-202ENST00000361332 PYM1Q9BRP8 204 aaKnown RBP9.33□□□□□ -0.92
CTNND1-202ENST00000361332 KIF9Q9HAQ2 790 aa9.33□□□□□ -0.92
CTNND1-202ENST00000361332 RABGAP1Q9Y3P9 1069 aa9.33□□□□□ -0.92
CTNND1-202ENST00000361332 ZSCAN22P10073 491 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-202ENST00000361332 MAN1A1P33908 653 aa9.33□□□□□ -0.92
CTNND1-202ENST00000361332 KARSQ15046 597 aaKnown RBP9.33□□□□□ -0.92
CTNND1-202ENST00000361332 INTS8Q75QN2 995 aaKnown RBP9.33□□□□□ -0.92
CTNND1-202ENST00000361332 ZNF804AQ7Z570 1209 aa9.33□□□□□ -0.92
CTNND1-202ENST00000361332 GANCQ8TET4 914 aa9.33□□□□□ -0.92
CTNND1-202ENST00000361332 IQSEC3Q9UPP2 1182 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-202ENST00000361332 CNPY2Q9Y2B0 182 aa9.33□□□□□ -0.92
CTNND1-202ENST00000361332 STMN1P16949 149 aa9.33□□□□□ -0.92
CTNND1-202ENST00000361332 GBP1P32455 592 aa9.33□□□□□ -0.92
CTNND1-202ENST00000361332 HAND2P61296 217 aa9.33□□□□□ -0.92
CTNND1-202ENST00000361332 PPP2R3AQ06190 1150 aa9.33□□□□□ -0.92
CTNND1-202ENST00000361332 IFRD2Q12894 506 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-202ENST00000361332 NEDD9Q14511 834 aa9.33□□□□□ -0.92
CTNND1-202ENST00000361332 TBC1D9Q6ZT07 1266 aa9.33□□□□□ -0.92
CTNND1-202ENST00000361332 VCX3BQ9H321 246 aa9.33□□□□□ -0.92
CTNND1-202ENST00000361332 LMCD1Q9NZU5 365 aa9.33□□□□□ -0.92
CTNND1-202ENST00000361332 SUFUQ9UMX1 484 aa9.33□□□□□ -0.92
CTNND1-202ENST00000361332 PPFIA3O75145 1194 aa9.32□□□□□ -0.92
CTNND1-202ENST00000361332 MYCP01106 439 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-202ENST00000361332 C8orf34Q49A92 452 aa9.32□□□□□ -0.92
CTNND1-202ENST00000361332 SRGAP1Q7Z6B7 1085 aa9.32□□□□□ -0.92
CTNND1-202ENST00000361332 LRRC43Q8N309 656 aa9.32□□□□□ -0.92
CTNND1-202ENST00000361332 PDCD7Q8N8D1 485 aaKnown RBP9.32□□□□□ -0.92
CTNND1-202ENST00000361332 LZTFL1Q9NQ48 299 aa9.32□□□□□ -0.92
CTNND1-202ENST00000361332 GOLGA6CA6NDK9 693 aa9.32□□□□□ -0.92
CTNND1-202ENST00000361332 ATP5J2-PTCD1G3V325 749 aa9.32□□□□□ -0.92
CTNND1-202ENST00000361332 GOLGA6DP0CG33 693 aa9.32□□□□□ -0.92
CTNND1-202ENST00000361332 EVCP57679 992 aa9.32□□□□□ -0.92
CTNND1-202ENST00000361332 KCNH5Q8NCM2 988 aa9.32□□□□□ -0.92
CTNND1-202ENST00000361332 VCXQ9H320 206 aa9.32□□□□□ -0.92
CTNND1-202ENST00000361332 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.32□□□□□ -0.925e-6■■■□□ 17.3
CTNND1-202ENST00000361332 GOLGA6AQ9NYA3 693 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 240.2 ms