RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 M0QZ92 97 aa10.86□□□□□ -0.67
CUX1-203ENST00000360264 AFMP43652 599 aa10.86□□□□□ -0.67
CUX1-203ENST00000360264 AKAP4Q5JQC9 854 aa10.86□□□□□ -0.67
CUX1-203ENST00000360264 RTL1A6NKG5 1358 aa10.86□□□□□ -0.67
CUX1-203ENST00000360264 CUL4BQ13620 913 aa10.86□□□□□ -0.67
CUX1-203ENST00000360264 DDB1Q16531 1140 aa10.86□□□□□ -0.67
CUX1-203ENST00000360264 DHX58Q96C10 678 aa10.86□□□□□ -0.67
CUX1-203ENST00000360264 SLC9C2Q5TAH2 1124 aa10.86□□□□□ -0.67
CUX1-203ENST00000360264 ARHGEF10LQ9HCE6 1279 aa10.86□□□□□ -0.67
CUX1-203ENST00000360264 ELP1O95163 1332 aa10.86□□□□□ -0.67
CUX1-203ENST00000360264 RBM17Q96I25 401 aaKnown RBP10.86□□□□□ -0.67
CUX1-203ENST00000360264 TRIM6Q9C030 488 aaPredicted RBP10.86□□□□□ -0.67
CUX1-203ENST00000360264 MAP3K1Q13233 1512 aa10.85□□□□□ -0.67
CUX1-203ENST00000360264 NUCB1Q02818 461 aa10.85□□□□□ -0.67
CUX1-203ENST00000360264 GEN1Q17RS7 908 aa10.85□□□□□ -0.67
CUX1-203ENST00000360264 VCXQ9H320 206 aa10.85□□□□□ -0.67
CUX1-203ENST00000360264 BIRC2Q13490 618 aa10.85□□□□□ -0.67
CUX1-203ENST00000360264 TFIP11Q9UBB9 837 aaKnown RBP10.85□□□□□ -0.67
CUX1-203ENST00000360264 CCDC62Q6P9F0 684 aa10.85□□□□□ -0.67
CUX1-203ENST00000360264 ASXL1Q8IXJ9 1541 aa10.85□□□□□ -0.67
CUX1-203ENST00000360264 MCM6Q14566 821 aa10.85□□□□□ -0.67
CUX1-203ENST00000360264 NSMCE1Q8WV22 266 aa10.85□□□□□ -0.67
CUX1-203ENST00000360264 SELENOSQ9BQE4 189 aa10.85□□□□□ -0.67
CUX1-203ENST00000360264 NOD1Q9Y239 953 aa10.85□□□□□ -0.67
CUX1-203ENST00000360264 LUC7L2Q9Y383 392 aaKnown RBP10.85□□□□□ -0.67
CUX1-203ENST00000360264 NKIRAS1Q9NYS0 192 aa10.85□□□□□ -0.67
CUX1-203ENST00000360264 CCDC160A6NGH7 325 aa10.85□□□□□ -0.67
CUX1-203ENST00000360264 BRF1Q92994 677 aa10.85□□□□□ -0.67
CUX1-203ENST00000360264 MCM9Q9NXL9 1143 aa10.85□□□□□ -0.67
CUX1-203ENST00000360264 AGTPBP1Q9UPW5 1226 aa10.85□□□□□ -0.67
CUX1-203ENST00000360264 MYH10P35580 1976 aa10.85□□□□□ -0.67
CUX1-203ENST00000360264 LDHBP07195 334 aaKnown RBP10.85□□□□□ -0.67
CUX1-203ENST00000360264 GOLGA6CA6NDK9 693 aa10.85□□□□□ -0.67
CUX1-203ENST00000360264 GOLGA6BA6NDN3 693 aa10.85□□□□□ -0.67
CUX1-203ENST00000360264 GOLGA6DP0CG33 693 aa10.85□□□□□ -0.67
CUX1-203ENST00000360264 C14orf93Q9H972 538 aaKnown RBP10.85□□□□□ -0.67
CUX1-203ENST00000360264 GOLGA6AQ9NYA3 693 aa10.85□□□□□ -0.67
CUX1-203ENST00000360264 ZNF219Q9P2Y4 722 aaPredicted RBP10.85□□□□□ -0.67
CUX1-203ENST00000360264 SERPINA10Q9UK55 444 aa10.85□□□□□ -0.67
CUX1-203ENST00000360264 MAST3O60307 1309 aa10.85□□□□□ -0.67
CUX1-203ENST00000360264 KLHL40Q2TBA0 621 aa10.85□□□□□ -0.67
CUX1-203ENST00000360264 KSR2Q6VAB6 950 aa10.85□□□□□ -0.67
CUX1-203ENST00000360264 BEGAINQ9BUH8 593 aa10.85□□□□□ -0.67
CUX1-203ENST00000360264 SPTLC2O15270 562 aa10.84□□□□□ -0.67
CUX1-203ENST00000360264 LPXNO60711 386 aa10.84□□□□□ -0.67
CUX1-203ENST00000360264 MARCKSP29966 332 aaPredicted RBP10.84□□□□□ -0.67
CUX1-203ENST00000360264 NCAPGQ9BPX3 1015 aa10.84□□□□□ -0.67
CUX1-203ENST00000360264 PANK2Q9BZ23 570 aa10.84□□□□□ -0.67
CUX1-203ENST00000360264 DNAJC21Q5F1R6 531 aaKnown RBP10.84□□□□□ -0.67
CUX1-203ENST00000360264 SH2D4BQ5SQS7 431 aa10.84□□□□□ -0.67
CUX1-203ENST00000360264 DTHD1Q6ZMT9 781 aa10.84□□□□□ -0.67
CUX1-203ENST00000360264 HDXQ7Z353 690 aa10.84□□□□□ -0.67
CUX1-203ENST00000360264 LACTBP83111 547 aaPredicted RBP10.84□□□□□ -0.67
CUX1-203ENST00000360264 WDR66Q8TBY9 1149 aa10.84□□□□□ -0.67
CUX1-203ENST00000360264 XAGE3Q8WTP9 111 aa10.84□□□□□ -0.67
CUX1-203ENST00000360264 B4GALNT4Q76KP1 1039 aa10.84□□□□□ -0.67
CUX1-203ENST00000360264 ACTN4O43707 911 aaKnown RBP10.84□□□□□ -0.67
CUX1-203ENST00000360264 SDSP20132 328 aa10.84□□□□□ -0.67
CUX1-203ENST00000360264 RAB11FIP4Q86YS3 637 aa10.84□□□□□ -0.67
CUX1-203ENST00000360264 PCDH11XQ9BZA7 1347 aa10.84□□□□□ -0.67
CUX1-203ENST00000360264 PCDH11YQ9BZA8 1340 aa10.84□□□□□ -0.67
CUX1-203ENST00000360264 FAM212AQ96EL1 285 aa10.84□□□□□ -0.67
CUX1-203ENST00000360264 SLC5A4Q9NY91 659 aa10.84□□□□□ -0.67
CUX1-203ENST00000360264 RBM8AQ9Y5S9 174 aaKnown RBP10.84□□□□□ -0.67
CUX1-203ENST00000360264 CACNA2D3Q8IZS8 1091 aa10.84□□□□□ -0.67
CUX1-203ENST00000360264 KDM5BQ9UGL1 1544 aa10.84□□□□□ -0.67
CUX1-203ENST00000360264 DPH6Q7L8W6 267 aa10.84□□□□□ -0.67
CUX1-203ENST00000360264 PLCD3Q8N3E9 789 aa10.84□□□□□ -0.67
CUX1-203ENST00000360264 RHPN1Q8TCX5 695 aa10.84□□□□□ -0.67
CUX1-203ENST00000360264 LZTS2Q9BRK4 669 aa10.84□□□□□ -0.67
CUX1-203ENST00000360264 KRT5P13647 590 aa10.84□□□□□ -0.67
CUX1-203ENST00000360264 ARHGAP24Q8N264 748 aa10.84□□□□□ -0.67
CUX1-203ENST00000360264 MUM1L1Q5H9M0 696 aa10.83□□□□□ -0.68
CUX1-203ENST00000360264 SNRKQ9NRH2 765 aa10.83□□□□□ -0.68
CUX1-203ENST00000360264 ZFYVE9O95405 1425 aa10.83□□□□□ -0.68
CUX1-203ENST00000360264 PPIP5K1Q6PFW1 1433 aa10.83□□□□□ -0.68
CUX1-203ENST00000360264 GIGYF1O75420 1035 aaPredicted RBP10.83□□□□□ -0.68
CUX1-203ENST00000360264 ZMYND15Q9H091 742 aa10.83□□□□□ -0.68
CUX1-203ENST00000360264 BCAP29Q9UHQ4 241 aa10.83□□□□□ -0.68
CUX1-203ENST00000360264 KIF3CO14782 793 aa10.83□□□□□ -0.68
CUX1-203ENST00000360264 COPS6Q7L5N1 327 aa10.83□□□□□ -0.68
CUX1-203ENST00000360264 IRS4O14654 1257 aaPredicted RBP10.83□□□□□ -0.68
CUX1-203ENST00000360264 HCLS1P14317 486 aaPredicted RBP10.83□□□□□ -0.68
CUX1-203ENST00000360264 GJC1P36383 396 aa10.83□□□□□ -0.68
CUX1-203ENST00000360264 RASA3Q14644 834 aa10.83□□□□□ -0.68
CUX1-203ENST00000360264 ZNF277Q9NRM2 450 aaPredicted RBP10.83□□□□□ -0.68
CUX1-203ENST00000360264 F6X3S4 739 aa10.83□□□□□ -0.68
CUX1-203ENST00000360264 CPLX4Q7Z7G2 160 aa10.83□□□□□ -0.68
CUX1-203ENST00000360264 PPFIBP2Q8ND30 876 aa10.83□□□□□ -0.68
CUX1-203ENST00000360264 SNX21Q969T3 373 aa10.83□□□□□ -0.68
CUX1-203ENST00000360264 BIRC3Q13489 604 aa10.83□□□□□ -0.68
CUX1-203ENST00000360264 DZIP3Q86Y13 1208 aaKnown RBP10.83□□□□□ -0.68
CUX1-203ENST00000360264 RFX1P22670 979 aa10.83□□□□□ -0.68
CUX1-203ENST00000360264 ERCC5P28715 1186 aaPredicted RBP10.83□□□□□ -0.68
CUX1-203ENST00000360264 ATP11AP98196 1134 aa10.83□□□□□ -0.68
CUX1-203ENST00000360264 TMX1Q9H3N1 280 aa10.83□□□□□ -0.68
CUX1-203ENST00000360264 IVNS1ABPQ9Y6Y0 642 aa10.83□□□□□ -0.68
CUX1-203ENST00000360264 TNRQ92752 1358 aa10.83□□□□□ -0.68
CUX1-203ENST00000360264 DENND2AQ9ULE3 1009 aa10.83□□□□□ -0.68
CUX1-203ENST00000360264 PRXQ9BXM0 1461 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms