RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 MSL1Q68DK7 614 aa6.06□□□□□ -1.44
ATXN3-202ENST00000359366 NKX2-3Q8TAU0 364 aa6.06□□□□□ -1.44
ATXN3-202ENST00000359366 INCENPQ9NQS7 918 aa6.06□□□□□ -1.44
ATXN3-202ENST00000359366 GPHNQ9NQX3 736 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-202ENST00000359366 TPCN1Q9ULQ1 816 aa6.06□□□□□ -1.44
ATXN3-202ENST00000359366 MINPP1Q9UNW1 487 aa6.06□□□□□ -1.44
ATXN3-202ENST00000359366 CYP46A1Q9Y6A2 500 aa6.06□□□□□ -1.44
ATXN3-202ENST00000359366 TNRC6CQ9HCJ0 1690 aaKnown RBP6.06□□□□□ -1.44
ATXN3-202ENST00000359366 CICQ96RK0 1608 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-202ENST00000359366 ZNF532Q9HCE3 1301 aa6.06□□□□□ -1.44
ATXN3-202ENST00000359366 RGL2O15211 777 aa6.06□□□□□ -1.44
ATXN3-202ENST00000359366 GYS1P13807 737 aa6.06□□□□□ -1.44
ATXN3-202ENST00000359366 ST3GAL1Q11201 340 aa6.06□□□□□ -1.44
ATXN3-202ENST00000359366 ME3Q16798 604 aa6.06□□□□□ -1.44
ATXN3-202ENST00000359366 TPTE2Q6XPS3 522 aa6.06□□□□□ -1.44
ATXN3-202ENST00000359366 ILDR2Q71H61 639 aa6.06□□□□□ -1.44
ATXN3-202ENST00000359366 TXNRD3Q86VQ6 643 aa6.06□□□□□ -1.44
ATXN3-202ENST00000359366 RAB11FIP4Q86YS3 637 aa6.06□□□□□ -1.44
ATXN3-202ENST00000359366 MAGEB6Q8N7X4 407 aa6.06□□□□□ -1.44
ATXN3-202ENST00000359366 MIGA1Q8NAN2 632 aa6.06□□□□□ -1.44
ATXN3-202ENST00000359366 SPATA5Q8NB90 893 aa6.06□□□□□ -1.44
ATXN3-202ENST00000359366 NLRP3Q96P20 1036 aa6.06□□□□□ -1.44
ATXN3-202ENST00000359366 CDC5LQ99459 802 aaKnown RBP6.06□□□□□ -1.44
ATXN3-202ENST00000359366 SGIP1Q9BQI5 828 aa6.06□□□□□ -1.44
ATXN3-202ENST00000359366 OCEL1Q9H607 264 aa6.06□□□□□ -1.44
ATXN3-202ENST00000359366 ZSWIM6Q9HCJ5 1215 aa6.06□□□□□ -1.44
ATXN3-202ENST00000359366 CARMIL3Q8ND23 1372 aa6.05□□□□□ -1.44
ATXN3-202ENST00000359366 MYH7P12883 1935 aa6.05□□□□□ -1.44
ATXN3-202ENST00000359366 GPAA1O43292 621 aa6.05□□□□□ -1.44
ATXN3-202ENST00000359366 APPP05067 770 aa6.05□□□□□ -1.44
ATXN3-202ENST00000359366 PDE6AP16499 860 aa6.05□□□□□ -1.44
ATXN3-202ENST00000359366 FOSBP53539 338 aa6.05□□□□□ -1.44
ATXN3-202ENST00000359366 BLOC1S2Q6QNY1 142 aa6.05□□□□□ -1.44
ATXN3-202ENST00000359366 CNBD1Q8NA66 436 aa6.05□□□□□ -1.44
ATXN3-202ENST00000359366 ABCF2Q9UG63 623 aa6.05□□□□□ -1.44
ATXN3-202ENST00000359366 LIMCH1Q9UPQ0 1083 aa6.05□□□□□ -1.44
ATXN3-202ENST00000359366 RPAP1Q9BWH6 1393 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-202ENST00000359366 SMIM22K7EJ46 135 aa6.05□□□□□ -1.44
ATXN3-202ENST00000359366 PRKAB2O43741 272 aa6.05□□□□□ -1.44
ATXN3-202ENST00000359366 ARID4AP29374 1257 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-202ENST00000359366 TM4SF1P30408 202 aa6.05□□□□□ -1.44
ATXN3-202ENST00000359366 RPS8P62241 208 aaKnown RBP6.05□□□□□ -1.44
ATXN3-202ENST00000359366 RBM6P78332 1123 aaKnown RBP6.05□□□□□ -1.44
ATXN3-202ENST00000359366 DDR1Q08345 913 aa6.05□□□□□ -1.44
ATXN3-202ENST00000359366 TOB2Q14106 344 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-202ENST00000359366 SF3B3Q15393 1217 aaKnown RBP6.05□□□□□ -1.44
ATXN3-202ENST00000359366 MCTP1Q6DN14 999 aa6.05□□□□□ -1.44
ATXN3-202ENST00000359366 PRR5LQ6MZQ0 368 aa6.05□□□□□ -1.44
ATXN3-202ENST00000359366 POTEAQ6S8J7 498 aa6.05□□□□□ -1.44
ATXN3-202ENST00000359366 OLFM4Q6UX06 510 aa6.05□□□□□ -1.44
ATXN3-202ENST00000359366 KCNB2Q92953 911 aa6.05□□□□□ -1.44
ATXN3-202ENST00000359366 ARMT1Q9H993 441 aa6.05□□□□□ -1.44
ATXN3-202ENST00000359366 HELLSQ9NRZ9 838 aa6.05□□□□□ -1.44
ATXN3-202ENST00000359366 RGS17Q9UGC6 210 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-202ENST00000359366 ZNF831Q5JPB2 1677 aa6.05□□□□□ -1.44
ATXN3-202ENST00000359366 LRP5O75197 1615 aa6.05□□□□□ -1.44
ATXN3-202ENST00000359366 TCHHQ07283 1943 aa6.04□□□□□ -1.44
ATXN3-202ENST00000359366 UBR3Q6ZT12 1888 aa6.04□□□□□ -1.44
ATXN3-202ENST00000359366 FGAP02671 866 aa6.04□□□□□ -1.44
ATXN3-202ENST00000359366 RPS6KB1P23443 525 aa6.04□□□□□ -1.44
ATXN3-202ENST00000359366 ADD2P35612 726 aa6.04□□□□□ -1.44
ATXN3-202ENST00000359366 CHAF1AQ13111 956 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-202ENST00000359366 CUL4AQ13619 759 aa6.04□□□□□ -1.44
ATXN3-202ENST00000359366 RNF20Q5VTR2 975 aa6.04□□□□□ -1.44
ATXN3-202ENST00000359366 Q6ZUG5 572 aa6.04□□□□□ -1.44
ATXN3-202ENST00000359366 ADGRA1Q86SQ6 560 aa6.04□□□□□ -1.44
ATXN3-202ENST00000359366 VPS37DQ86XT2 251 aa6.04□□□□□ -1.44
ATXN3-202ENST00000359366 IL17RAQ96F46 866 aa6.04□□□□□ -1.44
ATXN3-202ENST00000359366 NEK1Q96PY6 1258 aa6.04□□□□□ -1.44
ATXN3-202ENST00000359366 MAP7D2Q96T17 732 aa6.04□□□□□ -1.44
ATXN3-202ENST00000359366 NYXQ9GZU5 481 aa6.04□□□□□ -1.44
ATXN3-202ENST00000359366 GDPD2Q9HCC8 539 aa6.04□□□□□ -1.44
ATXN3-202ENST00000359366 BSDC1Q9NW68 430 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-202ENST00000359366 LAMA4Q16363 1823 aa6.04□□□□□ -1.44
ATXN3-202ENST00000359366 COL1A1P02452 1464 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-202ENST00000359366 E7EWF7 191 aa6.04□□□□□ -1.44
ATXN3-202ENST00000359366 BAG4O95429 457 aaKnown RBP6.04□□□□□ -1.44
ATXN3-202ENST00000359366 SERPINB2P05120 415 aa6.04□□□□□ -1.44
ATXN3-202ENST00000359366 SLC4A8Q2Y0W8 1093 aa6.04□□□□□ -1.44
ATXN3-202ENST00000359366 SLC10A5Q5PT55 438 aa6.04□□□□□ -1.44
ATXN3-202ENST00000359366 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.04□□□□□ -1.44
ATXN3-202ENST00000359366 APPBP2Q92624 585 aa6.04□□□□□ -1.44
ATXN3-202ENST00000359366 BRF1Q92994 677 aa6.04□□□□□ -1.44
ATXN3-202ENST00000359366 ANKIB1Q9P2G1 1089 aa6.04□□□□□ -1.44
ATXN3-202ENST00000359366 LRP2BPQ9P2M1 347 aa6.04□□□□□ -1.44
ATXN3-202ENST00000359366 CIZ1Q9ULV3 898 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-202ENST00000359366 TCRBV5S4A2TA0A5A2 114 aa6.03□□□□□ -1.44
ATXN3-202ENST00000359366 TRAK2O60296 914 aa6.03□□□□□ -1.44
ATXN3-202ENST00000359366 JAK2O60674 1132 aa6.03□□□□□ -1.44
ATXN3-202ENST00000359366 KDM4AO75164 1064 aa6.03□□□□□ -1.44
ATXN3-202ENST00000359366 MBD4O95243 580 aa6.03□□□□□ -1.44
ATXN3-202ENST00000359366 PTMAP06454 111 aaKnown RBP6.03□□□□□ -1.44
ATXN3-202ENST00000359366 PTMSP20962 102 aa6.03□□□□□ -1.44
ATXN3-202ENST00000359366 RXRBP28702 533 aa6.03□□□□□ -1.44
ATXN3-202ENST00000359366 MCM2P49736 904 aa6.03□□□□□ -1.44
ATXN3-202ENST00000359366 APOBRQ0VD83 1088 aa6.03□□□□□ -1.44
ATXN3-202ENST00000359366 COL23A1Q86Y22 540 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-202ENST00000359366 PLCD3Q8N3E9 789 aa6.03□□□□□ -1.44
ATXN3-202ENST00000359366 FAM84BQ96KN1 310 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-202ENST00000359366 NBPF3Q9H094 633 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms