RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 PSMD1Q99460 953 aa16.07■□□□□ 0.16
CCDC197-201ENST00000359253 PUS7LQ9H0K6 701 aaKnown RBP16.07■□□□□ 0.16
CCDC197-201ENST00000359253 PDRG1Q9NUG6 133 aa16.07■□□□□ 0.16
CCDC197-201ENST00000359253 GGA1Q9UJY5 639 aa16.07■□□□□ 0.16
CCDC197-201ENST00000359253 LIMCH1Q9UPQ0 1083 aa16.07■□□□□ 0.16
CCDC197-201ENST00000359253 IRS2Q9Y4H2 1338 aa16.07■□□□□ 0.16
CCDC197-201ENST00000359253 TAF1P21675 1872 aa16.07■□□□□ 0.16
CCDC197-201ENST00000359253 SALL1Q9NSC2 1324 aa16.06■□□□□ 0.16
CCDC197-201ENST00000359253 LMNB1P20700 586 aa16.06■□□□□ 0.16
CCDC197-201ENST00000359253 DDIT3P35638 169 aa16.06■□□□□ 0.16
CCDC197-201ENST00000359253 IMMTQ16891 758 aaKnown RBP16.06■□□□□ 0.16
CCDC197-201ENST00000359253 SUPT20HQ8NEM7 779 aa16.06■□□□□ 0.16
CCDC197-201ENST00000359253 WDR66Q8TBY9 1149 aa16.06■□□□□ 0.16
CCDC197-201ENST00000359253 AIDAQ96BJ3 306 aa16.06■□□□□ 0.16
CCDC197-201ENST00000359253 TMX3Q96JJ7 454 aa16.06■□□□□ 0.16
CCDC197-201ENST00000359253 NEK1Q96PY6 1258 aa16.06■□□□□ 0.16
CCDC197-201ENST00000359253 SLKQ9H2G2 1235 aaPredicted RBP16.06■□□□□ 0.16
CCDC197-201ENST00000359253 SH2B1Q9NRF2 756 aaPredicted RBP16.06■□□□□ 0.16
CCDC197-201ENST00000359253 SLX4Q8IY92 1834 aa16.05■□□□□ 0.16
CCDC197-201ENST00000359253 RPS6KB1P23443 525 aa16.05■□□□□ 0.16
CCDC197-201ENST00000359253 MAGEB6Q8N7X4 407 aa16.05■□□□□ 0.16
CCDC197-201ENST00000359253 TDRD7Q8NHU6 1098 aaKnown RBP16.05■□□□□ 0.16
CCDC197-201ENST00000359253 CHMP4CQ96CF2 233 aa16.05■□□□□ 0.16
CCDC197-201ENST00000359253 RTFDC1Q9BY42 306 aaPredicted RBP16.05■□□□□ 0.16
CCDC197-201ENST00000359253 UPF3BQ9BZI7 483 aaKnown RBP16.05■□□□□ 0.16
CCDC197-201ENST00000359253 TAOK3Q9H2K8 898 aa16.05■□□□□ 0.16
CCDC197-201ENST00000359253 UTRNP46939 3433 aa16.05■□□□□ 0.16
CCDC197-201ENST00000359253 COL11A2P13942 1736 aaPredicted RBP16.05■□□□□ 0.16
CCDC197-201ENST00000359253 ZC3H4Q9UPT8 1303 aaKnown RBP16.04■□□□□ 0.16
CCDC197-201ENST00000359253 PATL2C9JE40 543 aaKnown RBP16.04■□□□□ 0.16
CCDC197-201ENST00000359253 NFKBIEO00221 500 aa16.04■□□□□ 0.16
CCDC197-201ENST00000359253 CYP21A2P08686 494 aa16.04■□□□□ 0.16
CCDC197-201ENST00000359253 PDIA4P13667 645 aaKnown RBP16.04■□□□□ 0.16
CCDC197-201ENST00000359253 NUCB2P80303 420 aa16.04■□□□□ 0.16
CCDC197-201ENST00000359253 GPSM2P81274 684 aa16.04■□□□□ 0.16
CCDC197-201ENST00000359253 ADCK5Q3MIX3 580 aa16.04■□□□□ 0.16
CCDC197-201ENST00000359253 MPNDQ8N594 471 aa16.04■□□□□ 0.16
CCDC197-201ENST00000359253 STRBPQ96SI9 672 aaKnown RBP16.04■□□□□ 0.16
CCDC197-201ENST00000359253 NSFL1CQ9UNZ2 370 aaKnown RBP16.04■□□□□ 0.16
CCDC197-201ENST00000359253 DUOX1Q9NRD9 1551 aa16.04■□□□□ 0.16
CCDC197-201ENST00000359253 LRRC37AA6NMS7 1700 aa16.03■□□□□ 0.16
CCDC197-201ENST00000359253 FGAP02671 866 aa16.03■□□□□ 0.16
CCDC197-201ENST00000359253 CHGBP05060 677 aa16.03■□□□□ 0.16
CCDC197-201ENST00000359253 CERS3Q8IU89 383 aa16.03■□□□□ 0.16
CCDC197-201ENST00000359253 FBXL16Q8N461 479 aa16.03■□□□□ 0.16
CCDC197-201ENST00000359253 NACAP1Q9BZK3 213 aa16.03■□□□□ 0.16
CCDC197-201ENST00000359253 RAI14Q9P0K7 980 aa16.03■□□□□ 0.16
CCDC197-201ENST00000359253 ZNF219Q9P2Y4 722 aaPredicted RBP16.03■□□□□ 0.16
CCDC197-201ENST00000359253 ZNF213O14771 459 aa16.02■□□□□ 0.16
CCDC197-201ENST00000359253 UFL1O94874 794 aa16.02■□□□□ 0.16
CCDC197-201ENST00000359253 IL1R1P14778 569 aa16.02■□□□□ 0.16
CCDC197-201ENST00000359253 AK2P54819 239 aa16.02■□□□□ 0.16
CCDC197-201ENST00000359253 ABCF2Q9UG63 623 aa16.02■□□□□ 0.16
CCDC197-201ENST00000359253 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.02■□□□□ 0.16
CCDC197-201ENST00000359253 WDR19Q8NEZ3 1342 aa16.01■□□□□ 0.15
CCDC197-201ENST00000359253 CYP7A1P22680 504 aa16.01■□□□□ 0.15
CCDC197-201ENST00000359253 GSTO1P78417 241 aa16.01■□□□□ 0.15
CCDC197-201ENST00000359253 SLFNL1Q499Z3 407 aa16.01■□□□□ 0.15
CCDC197-201ENST00000359253 C9orf131Q5VYM1 1079 aa16.01■□□□□ 0.15
CCDC197-201ENST00000359253 NAA16Q6N069 864 aaPredicted RBP16.01■□□□□ 0.15
CCDC197-201ENST00000359253 GIMAP6Q6P9H5 292 aa16.01■□□□□ 0.15
CCDC197-201ENST00000359253 DPP8Q6V1X1 898 aaPredicted RBP16.01■□□□□ 0.15
CCDC197-201ENST00000359253 DHX32Q7L7V1 743 aaKnown RBP16.01■□□□□ 0.15
CCDC197-201ENST00000359253 SPRYD3Q8NCJ5 442 aa16.01■□□□□ 0.15
CCDC197-201ENST00000359253 TBC1D16Q8TBP0 767 aa16.01■□□□□ 0.15
CCDC197-201ENST00000359253 TBC1D22AQ8WUA7 517 aa16.01■□□□□ 0.15
CCDC197-201ENST00000359253 EYA3Q99504 573 aa16.01■□□□□ 0.15
CCDC197-201ENST00000359253 ANP32EQ9BTT0 268 aa16.01■□□□□ 0.15
CCDC197-201ENST00000359253 CHD4Q14839 1912 aa16■□□□□ 0.15
CCDC197-201ENST00000359253 E7EWF7 191 aa16■□□□□ 0.15
CCDC197-201ENST00000359253 LDHCP07864 332 aa16■□□□□ 0.15
CCDC197-201ENST00000359253 YY1P25490 414 aa16■□□□□ 0.15
CCDC197-201ENST00000359253 COA1Q9GZY4 146 aa16■□□□□ 0.15
CCDC197-201ENST00000359253 CD209Q9NNX6 404 aa16■□□□□ 0.15
CCDC197-201ENST00000359253 SNED1Q8TER0 1413 aa16■□□□□ 0.15
CCDC197-201ENST00000359253 COL1A1P02452 1464 aaPredicted RBP15.99■□□□□ 0.15
CCDC197-201ENST00000359253 MAGEB6P1A0A0J9YX57 407 aa15.99■□□□□ 0.15
CCDC197-201ENST00000359253 WTIPA6NIX2 430 aaPredicted RBP15.99■□□□□ 0.15
CCDC197-201ENST00000359253 MBD4O95243 580 aa15.99■□□□□ 0.15
CCDC197-201ENST00000359253 APPP05067 770 aa15.99■□□□□ 0.15
CCDC197-201ENST00000359253 KLRK1P26718 216 aa15.99■□□□□ 0.15
CCDC197-201ENST00000359253 TRDNQ13061 729 aa15.99■□□□□ 0.15
CCDC197-201ENST00000359253 OLFM4Q6UX06 510 aa15.99■□□□□ 0.15
CCDC197-201ENST00000359253 IFNL3Q8IZI9 196 aa15.99■□□□□ 0.15
CCDC197-201ENST00000359253 NSUN4Q96CB9 384 aaKnown RBP15.99■□□□□ 0.15
CCDC197-201ENST00000359253 RNF181Q9P0P0 153 aa15.99■□□□□ 0.15
CCDC197-201ENST00000359253 IQSEC3Q9UPP2 1182 aaPredicted RBP15.99■□□□□ 0.15
CCDC197-201ENST00000359253 SUGT1Q9Y2Z0 365 aa15.99■□□□□ 0.15
CCDC197-201ENST00000359253 MYH13Q9UKX3 1938 aa15.99■□□□□ 0.15
CCDC197-201ENST00000359253 C6orf229H3BNL8 230 aa15.98■□□□□ 0.15
CCDC197-201ENST00000359253 FOXP2O15409 715 aa15.98■□□□□ 0.15
CCDC197-201ENST00000359253 IARSP41252 1262 aaKnown RBP15.98■□□□□ 0.15
CCDC197-201ENST00000359253 NT5C2P49902 561 aa15.98■□□□□ 0.15
CCDC197-201ENST00000359253 EXOSC10Q01780 885 aaKnown RBP15.98■□□□□ 0.15
CCDC197-201ENST00000359253 RAB3GAP1Q15042 981 aa15.98■□□□□ 0.15
CCDC197-201ENST00000359253 FER1L6Q2WGJ9 1857 aa15.98■□□□□ 0.15
CCDC197-201ENST00000359253 TXNRD3Q86VQ6 643 aa15.98■□□□□ 0.15
CCDC197-201ENST00000359253 SLF2Q8IX21 1173 aa15.98■□□□□ 0.15
CCDC197-201ENST00000359253 NCOA7Q8NI08 942 aa15.98■□□□□ 0.15
CCDC197-201ENST00000359253 AGXT2Q9BYV1 514 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms