RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 RTN1Q16799 776 aa12.95□□□□□ -0.34
SSU72-202ENST00000359060 DCAF8Q5TAQ9 597 aa12.95□□□□□ -0.34
SSU72-202ENST00000359060 LTN1O94822 1766 aa12.95□□□□□ -0.34
SSU72-202ENST00000359060 RAD21O60216 631 aa12.95□□□□□ -0.34
SSU72-202ENST00000359060 CAVIN2O95810 425 aa12.95□□□□□ -0.34
SSU72-202ENST00000359060 BCAMP50895 628 aa12.95□□□□□ -0.34
SSU72-202ENST00000359060 KCNQ4P56696 695 aa12.95□□□□□ -0.34
SSU72-202ENST00000359060 MEX3CQ5U5Q3 659 aaKnown RBP12.95□□□□□ -0.34
SSU72-202ENST00000359060 IQCA1Q86XH1 822 aa12.95□□□□□ -0.34
SSU72-202ENST00000359060 WWC3Q9ULE0 1092 aa12.95□□□□□ -0.34
SSU72-202ENST00000359060 OVOS2A0A0G2JMS6 1433 aa12.95□□□□□ -0.34
SSU72-202ENST00000359060 KRT23Q9C075 422 aa12.95□□□□□ -0.34
SSU72-202ENST00000359060 FBXO3Q9UK99 471 aa12.95□□□□□ -0.34
SSU72-202ENST00000359060 MRVI1Q9Y6F6 885 aa12.95□□□□□ -0.34
SSU72-202ENST00000359060 ELP1O95163 1332 aa12.94□□□□□ -0.34
SSU72-202ENST00000359060 ZNF500O60304 480 aaPredicted RBP12.94□□□□□ -0.34
SSU72-202ENST00000359060 TNNT1P13805 278 aa12.94□□□□□ -0.34
SSU72-202ENST00000359060 TSGA10IPQ3SY00 556 aa12.94□□□□□ -0.34
SSU72-202ENST00000359060 USPL1Q5W0Q7 1092 aa12.94□□□□□ -0.34
SSU72-202ENST00000359060 CCDC112Q8NEF3 446 aa12.94□□□□□ -0.34
SSU72-202ENST00000359060 CACNA1FO60840 1977 aa12.94□□□□□ -0.34
SSU72-202ENST00000359060 SMTNL1A8MU46 457 aa12.94□□□□□ -0.34
SSU72-202ENST00000359060 PRDM1O75626 825 aa12.94□□□□□ -0.34
SSU72-202ENST00000359060 LMOD1P29536 600 aaPredicted RBP12.94□□□□□ -0.34
SSU72-202ENST00000359060 ST3GAL1Q11201 340 aa12.94□□□□□ -0.34
SSU72-202ENST00000359060 TMC6Q7Z403 805 aa12.94□□□□□ -0.34
SSU72-202ENST00000359060 BRAPQ7Z569 592 aa12.94□□□□□ -0.34
SSU72-202ENST00000359060 NBPF5PQ86XG9 351 aaPredicted RBP12.94□□□□□ -0.34
SSU72-202ENST00000359060 PGBD1Q96JS3 809 aa12.94□□□□□ -0.34
SSU72-202ENST00000359060 CNNM2Q9H8M5 875 aa12.94□□□□□ -0.34
SSU72-202ENST00000359060 XRN1Q8IZH2 1706 aaKnown RBP12.94□□□□□ -0.34
SSU72-202ENST00000359060 ANO1Q5XXA6 986 aa12.93□□□□□ -0.34
SSU72-202ENST00000359060 ANKIB1Q9P2G1 1089 aa12.93□□□□□ -0.34
SSU72-202ENST00000359060 NALCNQ8IZF0 1738 aa12.93□□□□□ -0.34
SSU72-202ENST00000359060 TULP1O00294 542 aaPredicted RBP12.93□□□□□ -0.34
SSU72-202ENST00000359060 KLHL10Q6JEL2 608 aa12.93□□□□□ -0.34
SSU72-202ENST00000359060 FAM177A1Q8N128 213 aaPredicted RBP12.93□□□□□ -0.34
SSU72-202ENST00000359060 PIH1D3Q9NQM4 214 aaKnown RBP12.93□□□□□ -0.34
SSU72-202ENST00000359060 RGPD1P0DJD0 1748 aa12.93□□□□□ -0.34
SSU72-202ENST00000359060 SFPQP23246 707 aaKnown RBP eCLIP12.93□□□□□ -0.341e-7■□□□□ 11.3
SSU72-202ENST00000359060 MYSM1Q5VVJ2 828 aa12.93□□□□□ -0.34
SSU72-202ENST00000359060 KRT40Q6A162 431 aa12.93□□□□□ -0.34
SSU72-202ENST00000359060 CCAR2Q8N163 923 aaKnown RBP12.93□□□□□ -0.34
SSU72-202ENST00000359060 CMTR1Q8N1G2 835 aaKnown RBP12.93□□□□□ -0.34
SSU72-202ENST00000359060 KCNB2Q92953 911 aa12.93□□□□□ -0.34
SSU72-202ENST00000359060 C8orf37Q96NL8 207 aa12.93□□□□□ -0.34
SSU72-202ENST00000359060 CARMIL3Q8ND23 1372 aa12.92□□□□□ -0.34
SSU72-202ENST00000359060 DZIP1Q86YF9 867 aaKnown RBP12.92□□□□□ -0.34
SSU72-202ENST00000359060 MAP7D2Q96T17 732 aa12.92□□□□□ -0.34
SSU72-202ENST00000359060 PCDHA7Q9UN72 937 aa12.92□□□□□ -0.34
SSU72-202ENST00000359060 MROH5Q6ZUA9 1318 aa12.92□□□□□ -0.34
SSU72-202ENST00000359060 MAGEB6P1A0A0J9YX57 407 aa12.92□□□□□ -0.34
SSU72-202ENST00000359060 ADD2P35612 726 aa12.92□□□□□ -0.34
SSU72-202ENST00000359060 CRKLP46109 303 aaKnown RBP12.92□□□□□ -0.34
SSU72-202ENST00000359060 CASP7P55210 303 aa12.92□□□□□ -0.34
SSU72-202ENST00000359060 ATL3Q6DD88 541 aa12.92□□□□□ -0.34
SSU72-202ENST00000359060 CATIPQ7Z7H3 387 aa12.92□□□□□ -0.34
SSU72-202ENST00000359060 AIFM3Q96NN9 605 aa12.92□□□□□ -0.34
SSU72-202ENST00000359060 CLIC4Q9Y696 253 aa12.92□□□□□ -0.34
SSU72-202ENST00000359060 LOC102724428A0A0B4J2F2 783 aa12.92□□□□□ -0.34
SSU72-202ENST00000359060 IL6STP40189 918 aaPredicted RBP12.92□□□□□ -0.34
SSU72-202ENST00000359060 SIK1P57059 783 aa12.92□□□□□ -0.34
SSU72-202ENST00000359060 LRMPQ12912 555 aa12.92□□□□□ -0.34
SSU72-202ENST00000359060 SPECC1Q5M775 1068 aa12.92□□□□□ -0.34
SSU72-202ENST00000359060 FBXO18Q8NFZ0 1043 aa12.92□□□□□ -0.34
SSU72-202ENST00000359060 ESR2Q92731 530 aa12.92□□□□□ -0.34
SSU72-202ENST00000359060 INCENPQ9NQS7 918 aa12.92□□□□□ -0.34
SSU72-202ENST00000359060 ZNF75DP51815 510 aa12.91□□□□□ -0.34
SSU72-202ENST00000359060 PARP10Q53GL7 1025 aa12.91□□□□□ -0.34
SSU72-202ENST00000359060 CTCFLQ8NI51 663 aaPredicted RBP12.91□□□□□ -0.34
SSU72-202ENST00000359060 TMEM87BQ96K49 555 aa12.91□□□□□ -0.34
SSU72-202ENST00000359060 SKILP12757 684 aa12.91□□□□□ -0.34
SSU72-202ENST00000359060 USP5P45974 858 aa12.91□□□□□ -0.34
SSU72-202ENST00000359060 GYG1P46976 350 aa12.91□□□□□ -0.34
SSU72-202ENST00000359060 PTPN14Q15678 1187 aa12.91□□□□□ -0.34
SSU72-202ENST00000359060 IFNL3Q8IZI9 196 aa12.91□□□□□ -0.34
SSU72-202ENST00000359060 TSC1Q92574 1164 aa12.91□□□□□ -0.34
SSU72-202ENST00000359060 CYP19A1P11511 503 aaPredicted RBP12.91□□□□□ -0.34
SSU72-202ENST00000359060 FAM98CQ17RN3 349 aaKnown RBP12.91□□□□□ -0.34
SSU72-202ENST00000359060 NLRP3Q96P20 1036 aa12.91□□□□□ -0.34
SSU72-202ENST00000359060 SETDB2Q96T68 719 aa12.91□□□□□ -0.34
SSU72-202ENST00000359060 LMTK3Q96Q04 1460 aa12.91□□□□□ -0.34
SSU72-202ENST00000359060 hCG_1642624A0A1W2PR95 340 aa12.91□□□□□ -0.34
SSU72-202ENST00000359060 SUSD4Q5VX71 490 aa12.91□□□□□ -0.34
SSU72-202ENST00000359060 SDR42E1Q8WUS8 393 aa12.91□□□□□ -0.34
SSU72-202ENST00000359060 SMARCC1Q92922 1105 aaPredicted RBP12.91□□□□□ -0.34
SSU72-202ENST00000359060 KCNJ14Q9UNX9 436 aa12.91□□□□□ -0.34
SSU72-202ENST00000359060 PRKAB2O43741 272 aa12.9□□□□□ -0.34
SSU72-202ENST00000359060 MARCH6O60337 910 aa12.9□□□□□ -0.34
SSU72-202ENST00000359060 ZNF202O95125 648 aa12.9□□□□□ -0.34
SSU72-202ENST00000359060 NRBP1Q9UHY1 535 aa12.9□□□□□ -0.34
SSU72-202ENST00000359060 RCOR1Q9UKL0 485 aa12.9□□□□□ -0.34
SSU72-202ENST00000359060 PATL2C9JE40 543 aaKnown RBP12.9□□□□□ -0.34
SSU72-202ENST00000359060 TRIM28Q13263 835 aaKnown RBP12.9□□□□□ -0.34
SSU72-202ENST00000359060 UBE3CQ15386 1083 aa12.9□□□□□ -0.34
SSU72-202ENST00000359060 IFIT1BQ5T764 474 aaKnown RBP12.9□□□□□ -0.34
SSU72-202ENST00000359060 TMX4Q9H1E5 349 aaPredicted RBP12.9□□□□□ -0.34
SSU72-202ENST00000359060 TSPY2A6NKD2 308 aa12.9□□□□□ -0.34
SSU72-202ENST00000359060 DYNC1I1O14576 645 aa12.9□□□□□ -0.34
SSU72-202ENST00000359060 GNAT2P19087 354 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms