RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 CYP7A1P22680 504 aa20.39■□□□□ 0.85
TPM1-205ENST00000357980 TMED8Q6PL24 325 aaPredicted RBP20.39■□□□□ 0.85
TPM1-205ENST00000357980 COA1Q9GZY4 146 aa20.39■□□□□ 0.85
TPM1-205ENST00000357980 A0A0G2JLW4 131 aa20.38■□□□□ 0.85
TPM1-205ENST00000357980 MECOMQ03112 1051 aa20.38■□□□□ 0.85
TPM1-205ENST00000357980 CC2D2BQ6DHV5 1058 aa20.38■□□□□ 0.85
TPM1-205ENST00000357980 TTLL6Q8N841 843 aa20.38■□□□□ 0.85
TPM1-205ENST00000357980 ZC3H12CQ9C0D7 883 aaKnown RBP20.38■□□□□ 0.85
TPM1-205ENST00000357980 RIMBP2O15034 1052 aa20.37■□□□□ 0.85
TPM1-205ENST00000357980 SPTY2D1Q68D10 685 aaPredicted RBP20.37■□□□□ 0.85
TPM1-205ENST00000357980 NAA16Q6N069 864 aaPredicted RBP20.37■□□□□ 0.85
TPM1-205ENST00000357980 JAKMIP1Q96N16 626 aaKnown RBP20.37■□□□□ 0.85
TPM1-205ENST00000357980 ZSWIM6Q9HCJ5 1215 aa20.37■□□□□ 0.85
TPM1-205ENST00000357980 PSDA5PKW4 1024 aaPredicted RBP20.37■□□□□ 0.85
TPM1-205ENST00000357980 FGAP02671 866 aa20.37■□□□□ 0.85
TPM1-205ENST00000357980 CASTP20810 708 aaKnown RBP20.37■□□□□ 0.85
TPM1-205ENST00000357980 TGFB2P61812 414 aa20.37■□□□□ 0.85
TPM1-205ENST00000357980 LCORLQ8N3X6 602 aa20.37■□□□□ 0.85
TPM1-205ENST00000357980 TTC14Q96N46 770 aa20.37■□□□□ 0.85
TPM1-205ENST00000357980 EYA3Q99504 573 aa20.37■□□□□ 0.85
TPM1-205ENST00000357980 FAM205AQ6ZU69 1335 aa20.36■□□□□ 0.85
TPM1-205ENST00000357980 TTLL5Q6EMB2 1281 aa20.36■□□□□ 0.85
TPM1-205ENST00000357980 MIGA1Q8NAN2 632 aa20.36■□□□□ 0.85
TPM1-205ENST00000357980 ARMT1Q9H993 441 aa20.36■□□□□ 0.85
TPM1-205ENST00000357980 ZNF219Q9P2Y4 722 aaPredicted RBP20.36■□□□□ 0.85
TPM1-205ENST00000357980 CTNNA3Q9UI47 895 aa20.36■□□□□ 0.85
TPM1-205ENST00000357980 ZNF646O15015 1829 aaPredicted RBP20.36■□□□□ 0.85
TPM1-205ENST00000357980 PTGER2P43116 358 aa20.35■□□□□ 0.85
TPM1-205ENST00000357980 KRT32Q14532 448 aa20.35■□□□□ 0.85
TPM1-205ENST00000357980 RIOK1Q9BRS2 568 aaKnown RBP20.35■□□□□ 0.85
TPM1-205ENST00000357980 ZMYM6O95789 1325 aa20.35■□□□□ 0.85
TPM1-205ENST00000357980 MYH2Q9UKX2 1941 aa20.35■□□□□ 0.85
TPM1-205ENST00000357980 LDHBP07195 334 aaKnown RBP20.34■□□□□ 0.85
TPM1-205ENST00000357980 PSMA5P28066 241 aa20.34■□□□□ 0.85
TPM1-205ENST00000357980 COL9A3Q14050 684 aaPredicted RBP20.34■□□□□ 0.85
TPM1-205ENST00000357980 ALX1Q15699 326 aa20.34■□□□□ 0.85
TPM1-205ENST00000357980 GRIK5Q16478 980 aa20.34■□□□□ 0.85
TPM1-205ENST00000357980 C21orf2O43822 256 aa20.34■□□□□ 0.85
TPM1-205ENST00000357980 CPA1P15085 419 aa20.34■□□□□ 0.85
TPM1-205ENST00000357980 GNAT2P19087 354 aa20.34■□□□□ 0.85
TPM1-205ENST00000357980 MCM2P49736 904 aa20.34■□□□□ 0.85
TPM1-205ENST00000357980 GRIPAP1Q4V328 841 aa20.34■□□□□ 0.85
TPM1-205ENST00000357980 RUFY3Q7L099 469 aa20.34■□□□□ 0.85
TPM1-205ENST00000357980 EPB41L4AQ9HCS5 686 aaPredicted RBP20.34■□□□□ 0.85
TPM1-205ENST00000357980 CYP46A1Q9Y6A2 500 aa20.34■□□□□ 0.85
TPM1-205ENST00000357980 SCN9AQ15858 1988 aa20.33■□□□□ 0.85
TPM1-205ENST00000357980 MAGEB6P1A0A0J9YX57 407 aa20.33■□□□□ 0.85
TPM1-205ENST00000357980 PATL2C9JE40 543 aaKnown RBP20.33■□□□□ 0.85
TPM1-205ENST00000357980 STOX1Q6ZVD7 989 aa20.33■□□□□ 0.85
TPM1-205ENST00000357980 DZIP1Q86YF9 867 aaKnown RBP20.33■□□□□ 0.85
TPM1-205ENST00000357980 TBC1D22AQ8WUA7 517 aa20.33■□□□□ 0.85
TPM1-205ENST00000357980 GSG1L2A8MUP6 293 aa20.32■□□□□ 0.84
TPM1-205ENST00000357980 DOK7Q18PE1 504 aa20.32■□□□□ 0.84
TPM1-205ENST00000357980 IMMTQ16891 758 aaKnown RBP20.32■□□□□ 0.84
TPM1-205ENST00000357980 CCDC93Q567U6 631 aa20.32■□□□□ 0.84
TPM1-205ENST00000357980 MFSD14BQ5SR56 506 aa20.32■□□□□ 0.84
TPM1-205ENST00000357980 PRKAB2O43741 272 aa20.31■□□□□ 0.84
TPM1-205ENST00000357980 APPP05067 770 aa20.31■□□□□ 0.84
TPM1-205ENST00000357980 GTF2IP78347 998 aa20.31■□□□□ 0.84
TPM1-205ENST00000357980 BLOC1S2Q6QNY1 142 aa20.31■□□□□ 0.84
TPM1-205ENST00000357980 TIAM2Q8IVF5 1701 aa20.31■□□□□ 0.84
TPM1-205ENST00000357980 CD2APQ9Y5K6 639 aa20.31■□□□□ 0.84
TPM1-205ENST00000357980 SLC4A4Q9Y6R1 1079 aa20.31■□□□□ 0.84
TPM1-205ENST00000357980 RPS6KB1P23443 525 aa20.3■□□□□ 0.84
TPM1-205ENST00000357980 DYNLL1P63167 89 aaKnown RBP20.3■□□□□ 0.84
TPM1-205ENST00000357980 KIAA2012Q0VF49 1180 aa20.3■□□□□ 0.84
TPM1-205ENST00000357980 PODNQ7Z5L7 613 aa20.3■□□□□ 0.84
TPM1-205ENST00000357980 RTKN2Q8IZC4 609 aa20.3■□□□□ 0.84
TPM1-205ENST00000357980 IFNL3Q8IZI9 196 aa20.3■□□□□ 0.84
TPM1-205ENST00000357980 SUPT20HQ8NEM7 779 aa20.3■□□□□ 0.84
TPM1-205ENST00000357980 NEK1Q96PY6 1258 aa20.3■□□□□ 0.84
TPM1-205ENST00000357980 PIM2Q9P1W9 311 aa20.3■□□□□ 0.84
TPM1-205ENST00000357980 BAZ2AQ9UIF9 1905 aaKnown RBP20.3■□□□□ 0.84
TPM1-205ENST00000357980 E7EWF7 191 aa20.3■□□□□ 0.84
TPM1-205ENST00000357980 AK2P54819 239 aa20.3■□□□□ 0.84
TPM1-205ENST00000357980 NBPF3Q9H094 633 aa20.3■□□□□ 0.84
TPM1-205ENST00000357980 DBNDD1Q9H9R9 158 aa20.3■□□□□ 0.84
TPM1-205ENST00000357980 PDRG1Q9NUG6 133 aa20.3■□□□□ 0.84
TPM1-205ENST00000357980 PSME4Q14997 1843 aa20.29■□□□□ 0.84
TPM1-205ENST00000357980 HAND2P61296 217 aa20.29■□□□□ 0.84
TPM1-205ENST00000357980 GSTO1P78417 241 aa20.29■□□□□ 0.84
TPM1-205ENST00000357980 TMX3Q96JJ7 454 aa20.29■□□□□ 0.84
TPM1-205ENST00000357980 PSMD1Q99460 953 aa20.29■□□□□ 0.84
TPM1-205ENST00000357980 SUGT1Q9Y2Z0 365 aa20.29■□□□□ 0.84
TPM1-205ENST00000357980 FER1L6Q2WGJ9 1857 aa20.29■□□□□ 0.84
TPM1-205ENST00000357980 CDK5RAP2Q96SN8 1893 aa20.29■□□□□ 0.84
TPM1-205ENST00000357980 ZNF213O14771 459 aa20.28■□□□□ 0.84
TPM1-205ENST00000357980 DIXDC1Q155Q3 683 aa20.28■□□□□ 0.84
TPM1-205ENST00000357980 AOC3Q16853 763 aa20.28■□□□□ 0.84
TPM1-205ENST00000357980 SPRYD3Q8NCJ5 442 aa20.28■□□□□ 0.84
TPM1-205ENST00000357980 NACAP1Q9BZK3 213 aa20.28■□□□□ 0.84
TPM1-205ENST00000357980 NAPBQ9H115 298 aa20.28■□□□□ 0.84
TPM1-205ENST00000357980 ALDH8A1Q9H2A2 487 aaPredicted RBP20.28■□□□□ 0.84
TPM1-205ENST00000357980 AATFQ9NY61 560 aaKnown RBP eCLIP20.28■□□□□ 0.84
TPM1-205ENST00000357980 MROH7-TTC4A0A0A0MT08 1334 aa20.28■□□□□ 0.84
TPM1-205ENST00000357980 ECE2O60344 883 aa20.27■□□□□ 0.84
TPM1-205ENST00000357980 CERS5Q8N5B7 392 aa20.27■□□□□ 0.84
TPM1-205ENST00000357980 SDR42E1Q8WUS8 393 aa20.27■□□□□ 0.84
TPM1-205ENST00000357980 G3V3G9 751 aa20.27■□□□□ 0.84
TPM1-205ENST00000357980 HMGB1P09429 215 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms