RNA–Protein interactions for RNA: ENST00000357428.5

USP33-201, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 5 BASIC

Gene USP33, Length 4,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-201ENST00000357428 IL6STP40189 918 aaPredicted RBP4.23□□□□□ -1.73
USP33-201ENST00000357428 GYG1P46976 350 aa4.23□□□□□ -1.73
USP33-201ENST00000357428 BCAMP50895 628 aa4.23□□□□□ -1.73
USP33-201ENST00000357428 FAM182BQ5T319 152 aa4.23□□□□□ -1.73
USP33-201ENST00000357428 SPTY2D1Q68D10 685 aaPredicted RBP4.23□□□□□ -1.73
USP33-201ENST00000357428 FAM177A1Q8N128 213 aaPredicted RBP4.23□□□□□ -1.73
USP33-201ENST00000357428 AOPEPQ8N6M6 819 aa4.23□□□□□ -1.73
USP33-201ENST00000357428 PHKBQ93100 1093 aa4.23□□□□□ -1.73
USP33-201ENST00000357428 LLPHQ9BRT6 129 aaKnown RBP4.23□□□□□ -1.73
USP33-201ENST00000357428 KAT14Q9H8E8 782 aa4.23□□□□□ -1.73
USP33-201ENST00000357428 GPR108Q9NPR9 543 aa4.23□□□□□ -1.73
USP33-201ENST00000357428 NSFL1CQ9UNZ2 370 aaKnown RBP4.23□□□□□ -1.73
USP33-201ENST00000357428 PIK3C2AO00443 1686 aa4.23□□□□□ -1.73
USP33-201ENST00000357428 ZBTB22O15209 634 aa4.23□□□□□ -1.73
USP33-201ENST00000357428 PDE8BO95263 885 aa4.23□□□□□ -1.73
USP33-201ENST00000357428 IPO7O95373 1038 aaKnown RBP4.23□□□□□ -1.73
USP33-201ENST00000357428 BAG3O95817 575 aa4.23□□□□□ -1.73
USP33-201ENST00000357428 SCRN1Q12765 414 aa4.23□□□□□ -1.73
USP33-201ENST00000357428 FILIP1LQ4L180 1135 aa4.23□□□□□ -1.73
USP33-201ENST00000357428 TTC6Q86TZ1 520 aa4.23□□□□□ -1.73
USP33-201ENST00000357428 OSBP2Q969R2 916 aa4.23□□□□□ -1.73
USP33-201ENST00000357428 MCM9Q9NXL9 1143 aa4.23□□□□□ -1.73
USP33-201ENST00000357428 ZKSCAN5Q9Y2L8 839 aa4.23□□□□□ -1.73
USP33-201ENST00000357428 KDM6AO15550 1401 aaPredicted RBP4.22□□□□□ -1.73
USP33-201ENST00000357428 CCDC194A0A1B0GVG4 234 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 CBFA2T2O43439 604 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 LDHCP07864 332 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 LIG1P18858 919 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 SFPQP23246 707 aaKnown RBP eCLIP4.22□□□□□ -1.73
USP33-201ENST00000357428 DHX8Q14562 1220 aaKnown RBP4.22□□□□□ -1.73
USP33-201ENST00000357428 HSP90AA4PQ58FG1 418 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 CNBD1Q8NA66 436 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 MNS1Q8NEH6 495 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 C16orf45Q96MC5 204 aaPredicted RBP4.22□□□□□ -1.73
USP33-201ENST00000357428 ZNF287Q9HBT7 754 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 VAT1LQ9HCJ6 419 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 PPP1R1BQ9UD71 204 aaPredicted RBP4.22□□□□□ -1.73
USP33-201ENST00000357428 SEC63Q9UGP8 760 aaKnown RBP4.22□□□□□ -1.73
USP33-201ENST00000357428 WWC3Q9ULE0 1092 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 DENND2AQ9ULE3 1009 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 SNAP23O00161 211 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 PFKFB2O60825 505 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 FOXO4P98177 505 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 CHRNDQ07001 517 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 CCDC96Q2M329 555 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 CCDC186Q7Z3E2 898 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 TMC6Q7Z403 805 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 BRAPQ7Z569 592 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 TMTC2Q8N394 836 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 TTLL11Q8NHH1 800 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 TMEM87BQ96K49 555 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 PUS7LQ9H0K6 701 aaKnown RBP4.22□□□□□ -1.73
USP33-201ENST00000357428 DNAJC5Q9H3Z4 198 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 AATFQ9NY61 560 aaKnown RBP eCLIP4.22□□□□□ -1.73
USP33-201ENST00000357428 USP21Q9UK80 565 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 FBXO3Q9UK99 471 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 ZDHHC9Q9Y397 364 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 CTDP1Q9Y5B0 961 aaPredicted RBP4.22□□□□□ -1.73
USP33-201ENST00000357428 RTL9Q8NET4 1388 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 SSBP05455 408 aaKnown RBP eCLIP4.22□□□□□ -1.73
USP33-201ENST00000357428 TSPY3P0CV98 308 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 TSPY8P0CW00 308 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 HIBADHP31937 336 aaKnown RBP4.22□□□□□ -1.73
USP33-201ENST00000357428 KIF5BP33176 963 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 TRAPPC3LQ5T215 181 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 ZNF804AQ7Z570 1209 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 VSIG10Q8N0Z9 540 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 CRACR2BQ8N4Y2 399 aaPredicted RBP4.22□□□□□ -1.73
USP33-201ENST00000357428 CCDC112Q8NEF3 446 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 ERCC4Q92889 916 aaPredicted RBP4.22□□□□□ -1.73
USP33-201ENST00000357428 TTC14Q96N46 770 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 ANKRD2Q9GZV1 360 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 CLSTN2Q9H4D0 955 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 TRMT1Q9NXH9 659 aaKnown RBP4.22□□□□□ -1.73
USP33-201ENST00000357428 MAGEC2Q9UBF1 373 aaPredicted RBP4.22□□□□□ -1.73
USP33-201ENST00000357428 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.22□□□□□ -1.73
USP33-201ENST00000357428 FMN2Q9NZ56 1722 aa4.22□□□□□ -1.73
USP33-201ENST00000357428 LDHBP07195 334 aaKnown RBP4.21□□□□□ -1.73
USP33-201ENST00000357428 PTGS1P23219 599 aa4.21□□□□□ -1.73
USP33-201ENST00000357428 FAM160A1Q05DH4 1040 aa4.21□□□□□ -1.73
USP33-201ENST00000357428 PICALMQ13492 652 aa4.21□□□□□ -1.73
USP33-201ENST00000357428 RABL6Q3YEC7 729 aaPredicted RBP4.21□□□□□ -1.73
USP33-201ENST00000357428 SUSD4Q5VX71 490 aa4.21□□□□□ -1.73
USP33-201ENST00000357428 USPL1Q5W0Q7 1092 aa4.21□□□□□ -1.73
USP33-201ENST00000357428 PPFIBP1Q86W92 1011 aa4.21□□□□□ -1.73
USP33-201ENST00000357428 SDR42E1Q8WUS8 393 aa4.21□□□□□ -1.73
USP33-201ENST00000357428 SMARCE1Q969G3 411 aa4.21□□□□□ -1.73
USP33-201ENST00000357428 ZNF622Q969S3 477 aaKnown RBP eCLIP4.21□□□□□ -1.735e-7■□□□□ 11.2
USP33-201ENST00000357428 KAZALD1Q96I82 304 aa4.21□□□□□ -1.73
USP33-201ENST00000357428 USP28Q96RU2 1077 aa4.21□□□□□ -1.73
USP33-201ENST00000357428 ISCA1Q9BUE6 129 aa4.21□□□□□ -1.73
USP33-201ENST00000357428 GPHNQ9NQX3 736 aaPredicted RBP4.21□□□□□ -1.73
USP33-201ENST00000357428 TCEAL9Q9UHQ7 104 aa4.21□□□□□ -1.73
USP33-201ENST00000357428 USP42Q9H9J4 1324 aaKnown RBP4.21□□□□□ -1.73
USP33-201ENST00000357428 PALLDQ8WX93 1383 aa4.21□□□□□ -1.73
USP33-201ENST00000357428 hCG_1642624A0A1W2PR95 340 aa4.21□□□□□ -1.74
USP33-201ENST00000357428 RIMBP2O15034 1052 aa4.21□□□□□ -1.74
USP33-201ENST00000357428 UFL1O94874 794 aa4.21□□□□□ -1.74
USP33-201ENST00000357428 KRT18P05783 430 aaKnown RBP4.21□□□□□ -1.74
USP33-201ENST00000357428 PDIA3P30101 505 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 194.6 ms