RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 ZNF710Q8N1W2 664 aa14.42□□□□□ -0.1
SMC4-202ENST00000357388 PIK3R4Q99570 1358 aa14.42□□□□□ -0.1
SMC4-202ENST00000357388 EEF2P13639 858 aaKnown RBP14.42□□□□□ -0.1
SMC4-202ENST00000357388 NLRP3Q96P20 1036 aa14.42□□□□□ -0.1
SMC4-202ENST00000357388 STX8Q9UNK0 236 aa14.42□□□□□ -0.1
SMC4-202ENST00000357388 NSD2O96028 1365 aa14.42□□□□□ -0.1
SMC4-202ENST00000357388 PLCB3Q01970 1234 aa14.42□□□□□ -0.1
SMC4-202ENST00000357388 TRMT1LQ7Z2T5 733 aaKnown RBP14.42□□□□□ -0.1
SMC4-202ENST00000357388 BRF1Q92994 677 aa14.42□□□□□ -0.1
SMC4-202ENST00000357388 UTP11Q9Y3A2 253 aaKnown RBP14.42□□□□□ -0.1
SMC4-202ENST00000357388 CNGA1P29973 690 aa14.42□□□□□ -0.1
SMC4-202ENST00000357388 ESR2Q92731 530 aa14.42□□□□□ -0.1
SMC4-202ENST00000357388 RPGRIP1Q96KN7 1286 aa14.42□□□□□ -0.1
SMC4-202ENST00000357388 ESYT1Q9BSJ8 1104 aa14.42□□□□□ -0.1
SMC4-202ENST00000357388 MAP3K2Q9Y2U5 619 aa14.42□□□□□ -0.1
SMC4-202ENST00000357388 GOLGA6BA6NDN3 693 aa14.41□□□□□ -0.1
SMC4-202ENST00000357388 TRIM75PA6NK02 468 aa14.41□□□□□ -0.1
SMC4-202ENST00000357388 GCKP35557 465 aa14.41□□□□□ -0.1
SMC4-202ENST00000357388 LRCH2Q5VUJ6 765 aa14.41□□□□□ -0.1
SMC4-202ENST00000357388 CYP26C1Q6V0L0 522 aa14.41□□□□□ -0.1
SMC4-202ENST00000357388 NME9Q86XW9 330 aa14.41□□□□□ -0.1
SMC4-202ENST00000357388 RGS22Q8NE09 1264 aa14.41□□□□□ -0.1
SMC4-202ENST00000357388 C6orf50Q9HD87 102 aa14.41□□□□□ -0.1
SMC4-202ENST00000357388 RAD50Q92878 1312 aa14.41□□□□□ -0.1
SMC4-202ENST00000357388 PAK2Q13177 524 aa14.41□□□□□ -0.1
SMC4-202ENST00000357388 DNM1Q05193 864 aaKnown RBP14.41□□□□□ -0.1
SMC4-202ENST00000357388 ZNF804AQ7Z570 1209 aa14.41□□□□□ -0.1
SMC4-202ENST00000357388 ARHGEF2Q92974 986 aaKnown RBP14.41□□□□□ -0.1
SMC4-202ENST00000357388 TSPYL2Q9H2G4 693 aaPredicted RBP14.41□□□□□ -0.1
SMC4-202ENST00000357388 CALM1P0DP23 149 aa14.41□□□□□ -0.1
SMC4-202ENST00000357388 CALM2P0DP24 149 aa14.41□□□□□ -0.1
SMC4-202ENST00000357388 CALM3P0DP25 149 aa14.41□□□□□ -0.1
SMC4-202ENST00000357388 CALML3P27482 149 aa14.41□□□□□ -0.1
SMC4-202ENST00000357388 RTN1Q16799 776 aa14.41□□□□□ -0.1
SMC4-202ENST00000357388 SDCCAG8Q86SQ7 713 aaPredicted RBP14.41□□□□□ -0.1
SMC4-202ENST00000357388 CCDC25Q86WR0 208 aa14.41□□□□□ -0.1
SMC4-202ENST00000357388 THUMPD2Q9BTF0 503 aaKnown RBP14.41□□□□□ -0.1
SMC4-202ENST00000357388 NYXQ9GZU5 481 aa14.41□□□□□ -0.1
SMC4-202ENST00000357388 LARSQ9P2J5 1176 aaKnown RBP14.41□□□□□ -0.1
SMC4-202ENST00000357388 NAIPQ13075 1403 aa14.4□□□□□ -0.1
SMC4-202ENST00000357388 CD109Q6YHK3 1445 aa14.4□□□□□ -0.1
SMC4-202ENST00000357388 RIOK3O14730 519 aaKnown RBP14.4□□□□□ -0.1
SMC4-202ENST00000357388 PLCG2P16885 1265 aa14.4□□□□□ -0.1
SMC4-202ENST00000357388 MGEA5O60502 916 aa14.4□□□□□ -0.1
SMC4-202ENST00000357388 BANK1Q8NDB2 785 aa14.4□□□□□ -0.1
SMC4-202ENST00000357388 PPP1R9BQ96SB3 815 aa14.4□□□□□ -0.1
SMC4-202ENST00000357388 TACC3Q9Y6A5 838 aa14.4□□□□□ -0.1
SMC4-202ENST00000357388 CAMSAP2Q08AD1 1489 aa14.4□□□□□ -0.1
SMC4-202ENST00000357388 HPDP32754 393 aaPredicted RBP14.4□□□□□ -0.1
SMC4-202ENST00000357388 TAF12Q16514 161 aa14.4□□□□□ -0.1
SMC4-202ENST00000357388 GABPB2Q8TAK5 448 aaPredicted RBP14.4□□□□□ -0.1
SMC4-202ENST00000357388 SMARCC2Q8TAQ2 1214 aa14.4□□□□□ -0.1
SMC4-202ENST00000357388 JDP2Q8WYK2 163 aa14.4□□□□□ -0.1
SMC4-202ENST00000357388 MSH6P52701 1360 aa14.4□□□□□ -0.1
SMC4-202ENST00000357388 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.4□□□□□ -0.13e-9■■■■■ 72.1
SMC4-202ENST00000357388 IGSF3O75054 1194 aa14.4□□□□□ -0.1
SMC4-202ENST00000357388 MIER3Q7Z3K6 550 aa14.4□□□□□ -0.1
SMC4-202ENST00000357388 WDR97A6NE52 1622 aa14.4□□□□□ -0.1
SMC4-202ENST00000357388 ERCC5P28715 1186 aaPredicted RBP14.39□□□□□ -0.11
SMC4-202ENST00000357388 Q9H521 79 aa14.39□□□□□ -0.11
SMC4-202ENST00000357388 ELP1O95163 1332 aa14.39□□□□□ -0.11
SMC4-202ENST00000357388 PPFIA2O75334 1257 aa14.39□□□□□ -0.11
SMC4-202ENST00000357388 BRD3Q15059 726 aa14.39□□□□□ -0.11
SMC4-202ENST00000357388 CCT6BQ92526 530 aa14.39□□□□□ -0.11
SMC4-202ENST00000357388 RTL9Q8NET4 1388 aa14.39□□□□□ -0.11
SMC4-202ENST00000357388 CETN3O15182 167 aa14.39□□□□□ -0.11
SMC4-202ENST00000357388 GAS8O95995 478 aa14.39□□□□□ -0.11
SMC4-202ENST00000357388 OAS2P29728 719 aaKnown RBP14.39□□□□□ -0.11
SMC4-202ENST00000357388 UBE3BQ7Z3V4 1068 aa14.39□□□□□ -0.11
SMC4-202ENST00000357388 ZNF131P52739 623 aa14.39□□□□□ -0.11
SMC4-202ENST00000357388 RBBP5Q15291 538 aaKnown RBP14.39□□□□□ -0.11
SMC4-202ENST00000357388 NUP58Q9BVL2 599 aa14.39□□□□□ -0.11
SMC4-202ENST00000357388 THEGQ9P2T0 379 aa14.39□□□□□ -0.11
SMC4-202ENST00000357388 FAM13AO94988 1023 aa14.38□□□□□ -0.11
SMC4-202ENST00000357388 SDSP20132 328 aa14.38□□□□□ -0.11
SMC4-202ENST00000357388 PNMA8AQ86V59 439 aaPredicted RBP14.38□□□□□ -0.11
SMC4-202ENST00000357388 TMEM110-MUSTN1A8MSY1 372 aa14.38□□□□□ -0.11
SMC4-202ENST00000357388 DDX27Q96GQ7 796 aaKnown RBP14.38□□□□□ -0.11
SMC4-202ENST00000357388 NAP1L4Q99733 375 aaKnown RBP14.38□□□□□ -0.11
SMC4-202ENST00000357388 LARP6Q9BRS8 491 aaKnown RBP14.38□□□□□ -0.11
SMC4-202ENST00000357388 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.38□□□□□ -0.11
SMC4-202ENST00000357388 HVCN1Q96D96 273 aa14.38□□□□□ -0.11
SMC4-202ENST00000357388 EYA3Q99504 573 aa14.38□□□□□ -0.11
SMC4-202ENST00000357388 F6X3S4 739 aa14.38□□□□□ -0.11
SMC4-202ENST00000357388 RPL13P26373 211 aaKnown RBP14.38□□□□□ -0.11
SMC4-202ENST00000357388 ZSCAN26Q16670 478 aa14.38□□□□□ -0.11
SMC4-202ENST00000357388 IFIT1BQ5T764 474 aaKnown RBP14.38□□□□□ -0.11
SMC4-202ENST00000357388 HS2ST1Q7LGA3 356 aa14.38□□□□□ -0.11
SMC4-202ENST00000357388 DHX58Q96C10 678 aa14.38□□□□□ -0.11
SMC4-202ENST00000357388 CYP7A1P22680 504 aa14.38□□□□□ -0.11
SMC4-202ENST00000357388 HSPA1LP34931 641 aa14.38□□□□□ -0.11
SMC4-202ENST00000357388 IQCDQ96DY2 449 aa14.38□□□□□ -0.11
SMC4-202ENST00000357388 SNRKQ9NRH2 765 aa14.38□□□□□ -0.11
SMC4-202ENST00000357388 LGSNQ5TDP6 509 aa14.37□□□□□ -0.11
SMC4-202ENST00000357388 NECAB1Q8N987 351 aa14.37□□□□□ -0.11
SMC4-202ENST00000357388 EPSTI1Q96J88 318 aa14.37□□□□□ -0.11
SMC4-202ENST00000357388 RNF40O75150 1001 aa14.37□□□□□ -0.11
SMC4-202ENST00000357388 GRM1Q13255 1194 aa14.37□□□□□ -0.11
SMC4-202ENST00000357388 ANKRD13DQ6ZTN6 518 aa14.37□□□□□ -0.11
SMC4-202ENST00000357388 RBM8AQ9Y5S9 174 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms