RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 CTAGE1Q96RT6 745 aa19.36■□□□□ 0.69
COL27A1-201ENST00000356083 ZKSCAN3Q9BRR0 538 aa19.36■□□□□ 0.69
COL27A1-201ENST00000356083 SORBS3O60504 671 aa19.36■□□□□ 0.69
COL27A1-201ENST00000356083 HPDP32754 393 aaPredicted RBP19.36■□□□□ 0.69
COL27A1-201ENST00000356083 DDX19AQ9NUU7 478 aaKnown RBP19.36■□□□□ 0.69
COL27A1-201ENST00000356083 GOLGA6CA6NDK9 693 aa19.36■□□□□ 0.69
COL27A1-201ENST00000356083 GOLGA6BA6NDN3 693 aa19.36■□□□□ 0.69
COL27A1-201ENST00000356083 M0QZ92 97 aa19.36■□□□□ 0.69
COL27A1-201ENST00000356083 RRP9O43818 475 aaKnown RBP19.36■□□□□ 0.69
COL27A1-201ENST00000356083 GOLGA6DP0CG33 693 aa19.36■□□□□ 0.69
COL27A1-201ENST00000356083 GOLGA6AQ9NYA3 693 aa19.36■□□□□ 0.69
COL27A1-201ENST00000356083 SETDB1Q15047 1291 aa19.36■□□□□ 0.69
COL27A1-201ENST00000356083 KSR1Q8IVT5 923 aa19.36■□□□□ 0.69
COL27A1-201ENST00000356083 DDX27Q96GQ7 796 aaKnown RBP19.35■□□□□ 0.69
COL27A1-201ENST00000356083 CCDC42Q96M95 316 aa19.35■□□□□ 0.69
COL27A1-201ENST00000356083 NSD3Q9BZ95 1437 aa19.35■□□□□ 0.69
COL27A1-201ENST00000356083 DTHD1Q6ZMT9 781 aa19.35■□□□□ 0.69
COL27A1-201ENST00000356083 ACRBPQ8NEB7 543 aa19.35■□□□□ 0.69
COL27A1-201ENST00000356083 HELBQ8NG08 1087 aaPredicted RBP19.35■□□□□ 0.69
COL27A1-201ENST00000356083 ATP6V1E1P36543 226 aa19.35■□□□□ 0.69
COL27A1-201ENST00000356083 ITKQ08881 620 aa19.35■□□□□ 0.69
COL27A1-201ENST00000356083 TTC30AQ86WT1 665 aa19.35■□□□□ 0.69
COL27A1-201ENST00000356083 METTL13Q8N6R0 699 aa19.35■□□□□ 0.69
COL27A1-201ENST00000356083 KRT79Q5XKE5 535 aa19.35■□□□□ 0.69
COL27A1-201ENST00000356083 KIFAP3Q92845 792 aa19.35■□□□□ 0.69
COL27A1-201ENST00000356083 PI4KAP2A4QPH2 592 aa19.35■□□□□ 0.69
COL27A1-201ENST00000356083 STRN3Q13033 797 aa19.35■□□□□ 0.69
COL27A1-201ENST00000356083 PI4KAP1Q8N8J0 262 aa19.35■□□□□ 0.69
COL27A1-201ENST00000356083 SEL1L2Q5TEA6 688 aa19.34■□□□□ 0.69
COL27A1-201ENST00000356083 OPA1O60313 960 aa19.34■□□□□ 0.69
COL27A1-201ENST00000356083 PSPC1Q8WXF1 523 aaKnown RBP19.34■□□□□ 0.69
COL27A1-201ENST00000356083 MTRF1LQ9UGC7 380 aaKnown RBP19.34■□□□□ 0.69
COL27A1-201ENST00000356083 ANKRD50Q9ULJ7 1429 aa19.34■□□□□ 0.69
COL27A1-201ENST00000356083 VPS18Q9P253 973 aa19.34■□□□□ 0.69
COL27A1-201ENST00000356083 MTUS1Q9ULD2 1270 aa19.34■□□□□ 0.69
COL27A1-201ENST00000356083 OATP04181 439 aa19.34■□□□□ 0.69
COL27A1-201ENST00000356083 MICAL3Q7RTP6 2002 aa19.33■□□□□ 0.69
COL27A1-201ENST00000356083 RTCBQ9Y3I0 505 aaKnown RBP19.33■□□□□ 0.69
COL27A1-201ENST00000356083 NEDD9Q14511 834 aa19.33■□□□□ 0.69
COL27A1-201ENST00000356083 AOPEPQ8N6M6 819 aa19.33■□□□□ 0.69
COL27A1-201ENST00000356083 HCLS1P14317 486 aaPredicted RBP19.33■□□□□ 0.68
COL27A1-201ENST00000356083 NME9Q86XW9 330 aa19.33■□□□□ 0.68
COL27A1-201ENST00000356083 CPXCR1Q8N123 301 aa19.33■□□□□ 0.68
COL27A1-201ENST00000356083 MED10Q9BTT4 135 aa19.33■□□□□ 0.68
COL27A1-201ENST00000356083 KRT2P35908 639 aa19.33■□□□□ 0.68
COL27A1-201ENST00000356083 GPIHBP1Q8IV16 184 aa19.33■□□□□ 0.68
COL27A1-201ENST00000356083 NAP1L4Q99733 375 aaKnown RBP19.33■□□□□ 0.68
COL27A1-201ENST00000356083 USH1GQ495M9 461 aa19.33■□□□□ 0.68
COL27A1-201ENST00000356083 IFT74Q96LB3 600 aa19.33■□□□□ 0.68
COL27A1-201ENST00000356083 SAMD15Q9P1V8 674 aa19.33■□□□□ 0.68
COL27A1-201ENST00000356083 ARID4AP29374 1257 aaPredicted RBP19.32■□□□□ 0.68
COL27A1-201ENST00000356083 OLA1Q9NTK5 396 aaKnown RBP19.32■□□□□ 0.68
COL27A1-201ENST00000356083 CADPSQ9ULU8 1353 aa19.32■□□□□ 0.68
COL27A1-201ENST00000356083 CASQ2O14958 399 aaPredicted RBP19.32■□□□□ 0.68
COL27A1-201ENST00000356083 CCNT1O60563 726 aaKnown RBP19.32■□□□□ 0.68
COL27A1-201ENST00000356083 SLC9C2Q5TAH2 1124 aa19.32■□□□□ 0.68
COL27A1-201ENST00000356083 AFAP1L2Q8N4X5 818 aa19.32■□□□□ 0.68
COL27A1-201ENST00000356083 BAG1Q99933 345 aaPredicted RBP19.32■□□□□ 0.68
COL27A1-201ENST00000356083 Q6ZUG5 572 aa19.32■□□□□ 0.68
COL27A1-201ENST00000356083 RABGAP1Q9Y3P9 1069 aa19.32■□□□□ 0.68
COL27A1-201ENST00000356083 GAPVD1Q14C86 1478 aa19.32■□□□□ 0.68
COL27A1-201ENST00000356083 WDR66Q8TBY9 1149 aa19.32■□□□□ 0.68
COL27A1-201ENST00000356083 BACH2Q9BYV9 841 aa19.32■□□□□ 0.68
COL27A1-201ENST00000356083 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.32■□□□□ 0.68
COL27A1-201ENST00000356083 EPB41P11171 864 aaKnown RBP19.32■□□□□ 0.68
COL27A1-201ENST00000356083 CAPN2P17655 700 aa19.32■□□□□ 0.68
COL27A1-201ENST00000356083 SMTNP53814 917 aa19.32■□□□□ 0.68
COL27A1-201ENST00000356083 CALCOCO2Q13137 446 aa19.32■□□□□ 0.68
COL27A1-201ENST00000356083 MUM1L1Q5H9M0 696 aa19.31■□□□□ 0.68
COL27A1-201ENST00000356083 GNAQP50148 359 aa19.31■□□□□ 0.68
COL27A1-201ENST00000356083 KRT86O43790 486 aa19.31■□□□□ 0.68
COL27A1-201ENST00000356083 ATP11AP98196 1134 aa19.31■□□□□ 0.68
COL27A1-201ENST00000356083 RILPQ96NA2 401 aa19.31■□□□□ 0.68
COL27A1-201ENST00000356083 GPR161Q8N6U8 529 aaKnown RBP19.31■□□□□ 0.68
COL27A1-201ENST00000356083 SYT1P21579 422 aa19.31■□□□□ 0.68
COL27A1-201ENST00000356083 CABLES1Q8TDN4 633 aa19.31■□□□□ 0.68
COL27A1-201ENST00000356083 SMCR8Q8TEV9 937 aaPredicted RBP19.31■□□□□ 0.68
COL27A1-201ENST00000356083 TEX13AQ9BXU3 409 aaPredicted RBP19.31■□□□□ 0.68
COL27A1-201ENST00000356083 HAUS2Q9NVX0 235 aa19.31■□□□□ 0.68
COL27A1-201ENST00000356083 GOLGA4Q13439 2230 aaKnown RBP19.31■□□□□ 0.68
COL27A1-201ENST00000356083 SAT1P21673 171 aa19.31■□□□□ 0.68
COL27A1-201ENST00000356083 CCDC184Q52MB2 194 aa19.31■□□□□ 0.68
COL27A1-201ENST00000356083 SWAP70Q9UH65 585 aa19.31■□□□□ 0.68
COL27A1-201ENST00000356083 TCP10Q12799 353 aa19.3■□□□□ 0.68
COL27A1-201ENST00000356083 ZNF569Q5MCW4 686 aa19.3■□□□□ 0.68
COL27A1-201ENST00000356083 RAB3IPQ96QF0 476 aaPredicted RBP19.3■□□□□ 0.68
COL27A1-201ENST00000356083 CD2APQ9Y5K6 639 aa19.3■□□□□ 0.68
COL27A1-201ENST00000356083 NCAPGQ9BPX3 1015 aa19.3■□□□□ 0.68
COL27A1-201ENST00000356083 MAPK8IP1Q9UQF2 711 aa19.3■□□□□ 0.68
COL27A1-201ENST00000356083 NEMFO60524 1076 aa19.3■□□□□ 0.68
COL27A1-201ENST00000356083 GABPB2Q8TAK5 448 aaPredicted RBP19.3■□□□□ 0.68
COL27A1-201ENST00000356083 RNF217Q8TC41 542 aa19.3■□□□□ 0.68
COL27A1-201ENST00000356083 NXNQ6DKJ4 435 aa19.3■□□□□ 0.68
COL27A1-201ENST00000356083 NKIRAS1Q9NYS0 192 aa19.3■□□□□ 0.68
COL27A1-201ENST00000356083 SLC12A2P55011 1212 aa19.3■□□□□ 0.68
COL27A1-201ENST00000356083 TRIM31Q9BZY9 425 aa19.3■□□□□ 0.68
COL27A1-201ENST00000356083 VCX3BQ9H321 246 aa19.3■□□□□ 0.68
COL27A1-201ENST00000356083 ANKRD13DQ6ZTN6 518 aa19.3■□□□□ 0.68
COL27A1-201ENST00000356083 SSH1Q8WYL5 1049 aa19.3■□□□□ 0.68
COL27A1-201ENST00000356083 CARD10Q9BWT7 1032 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms