RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 TDRD7Q8NHU6 1098 aaKnown RBP27.12■■□□□ 1.93
SCAMP3-202ENST00000355379 TNPO1Q92973 898 aaKnown RBP27.12■■□□□ 1.93
SCAMP3-202ENST00000355379 NSFL1CQ9UNZ2 370 aaKnown RBP27.12■■□□□ 1.93
SCAMP3-202ENST00000355379 SALL1Q9NSC2 1324 aa27.12■■□□□ 1.93
SCAMP3-202ENST00000355379 A0A0G2JLW4 131 aa27.11■■□□□ 1.93
SCAMP3-202ENST00000355379 EXOSC10Q01780 885 aaKnown RBP27.11■■□□□ 1.93
SCAMP3-202ENST00000355379 ATP6V0A2Q9Y487 856 aa27.11■■□□□ 1.93
SCAMP3-202ENST00000355379 TPCN1Q9ULQ1 816 aa27.11■■□□□ 1.93
SCAMP3-202ENST00000355379 UFL1O94874 794 aa27.1■■□□□ 1.93
SCAMP3-202ENST00000355379 LARGE1O95461 756 aa27.1■■□□□ 1.93
SCAMP3-202ENST00000355379 ME3Q16798 604 aa27.1■■□□□ 1.93
SCAMP3-202ENST00000355379 SPTY2D1Q68D10 685 aaPredicted RBP27.1■■□□□ 1.93
SCAMP3-202ENST00000355379 MSL1Q68DK7 614 aa27.1■■□□□ 1.93
SCAMP3-202ENST00000355379 CLEC17AQ6ZS10 378 aa27.1■■□□□ 1.93
SCAMP3-202ENST00000355379 FBXL16Q8N461 479 aa27.1■■□□□ 1.93
SCAMP3-202ENST00000355379 WDR66Q8TBY9 1149 aa27.1■■□□□ 1.93
SCAMP3-202ENST00000355379 MASTLQ96GX5 879 aa27.1■■□□□ 1.93
SCAMP3-202ENST00000355379 AGXT2Q9BYV1 514 aa27.1■■□□□ 1.93
SCAMP3-202ENST00000355379 ARMT1Q9H993 441 aa27.1■■□□□ 1.93
SCAMP3-202ENST00000355379 CHD4Q14839 1912 aa27.1■■□□□ 1.93
SCAMP3-202ENST00000355379 APPP05067 770 aa27.09■■□□□ 1.93
SCAMP3-202ENST00000355379 NAA16Q6N069 864 aaPredicted RBP27.09■■□□□ 1.93
SCAMP3-202ENST00000355379 Q6ZUG5 572 aa27.09■■□□□ 1.93
SCAMP3-202ENST00000355379 SLC51AQ86UW1 340 aa27.09■■□□□ 1.93
SCAMP3-202ENST00000355379 LARP6Q9BRS8 491 aaKnown RBP27.09■■□□□ 1.93
SCAMP3-202ENST00000355379 MCM4P33991 863 aa27.08■■□□□ 1.93
SCAMP3-202ENST00000355379 IFNL3Q8IZI9 196 aa27.08■■□□□ 1.93
SCAMP3-202ENST00000355379 LCORLQ8N3X6 602 aa27.08■■□□□ 1.93
SCAMP3-202ENST00000355379 TBC1D16Q8TBP0 767 aa27.08■■□□□ 1.93
SCAMP3-202ENST00000355379 TCEANC2Q96MN5 208 aa27.08■■□□□ 1.93
SCAMP3-202ENST00000355379 GBP4Q96PP9 640 aa27.08■■□□□ 1.93
SCAMP3-202ENST00000355379 TIAM2Q8IVF5 1701 aa27.07■■□□□ 1.92
SCAMP3-202ENST00000355379 WDR19Q8NEZ3 1342 aa27.07■■□□□ 1.92
SCAMP3-202ENST00000355379 MAGEB6P1A0A0J9YX57 407 aa27.07■■□□□ 1.92
SCAMP3-202ENST00000355379 GSG1L2A8MUP6 293 aa27.07■■□□□ 1.92
SCAMP3-202ENST00000355379 NSUN4Q96CB9 384 aaKnown RBP27.07■■□□□ 1.92
SCAMP3-202ENST00000355379 NACAP1Q9BZK3 213 aa27.07■■□□□ 1.92
SCAMP3-202ENST00000355379 HAND2P61296 217 aa27.06■■□□□ 1.92
SCAMP3-202ENST00000355379 CHAF1AQ13111 956 aaPredicted RBP27.06■■□□□ 1.92
SCAMP3-202ENST00000355379 IL1R1P14778 569 aa27.06■■□□□ 1.92
SCAMP3-202ENST00000355379 ADGRA1Q86SQ6 560 aa27.06■■□□□ 1.92
SCAMP3-202ENST00000355379 CCDC83Q8IWF9 413 aa27.06■■□□□ 1.92
SCAMP3-202ENST00000355379 NCOA7Q8NI08 942 aa27.06■■□□□ 1.92
SCAMP3-202ENST00000355379 NAPBQ9H115 298 aa27.06■■□□□ 1.92
SCAMP3-202ENST00000355379 EPB41L4AQ9HCS5 686 aaPredicted RBP27.06■■□□□ 1.92
SCAMP3-202ENST00000355379 SLC4A4Q9Y6R1 1079 aa27.06■■□□□ 1.92
SCAMP3-202ENST00000355379 MECOMQ03112 1051 aa27.05■■□□□ 1.92
SCAMP3-202ENST00000355379 STYK1Q6J9G0 422 aa27.05■■□□□ 1.92
SCAMP3-202ENST00000355379 ZNF384Q8TF68 577 aa27.05■■□□□ 1.92
SCAMP3-202ENST00000355379 RIOK1Q9BRS2 568 aaKnown RBP27.05■■□□□ 1.92
SCAMP3-202ENST00000355379 CD209Q9NNX6 404 aa27.05■■□□□ 1.92
SCAMP3-202ENST00000355379 POLLQ9UGP5 575 aa27.05■■□□□ 1.92
SCAMP3-202ENST00000355379 SMC3Q9UQE7 1217 aa27.05■■□□□ 1.92
SCAMP3-202ENST00000355379 ST3GAL1Q11201 340 aa27.04■■□□□ 1.92
SCAMP3-202ENST00000355379 MB21D2Q8IYB1 491 aaPredicted RBP27.04■■□□□ 1.92
SCAMP3-202ENST00000355379 MIGA1Q8NAN2 632 aa27.04■■□□□ 1.92
SCAMP3-202ENST00000355379 NBPF3Q9H094 633 aa27.04■■□□□ 1.92
SCAMP3-202ENST00000355379 ZDHHC9Q9Y397 364 aa27.03■■□□□ 1.92
SCAMP3-202ENST00000355379 BRD1O95696 1058 aa27.02■■□□□ 1.92
SCAMP3-202ENST00000355379 MCM5P33992 734 aa27.02■■□□□ 1.92
SCAMP3-202ENST00000355379 DEFB132Q7Z7B7 95 aa27.02■■□□□ 1.92
SCAMP3-202ENST00000355379 RALYLQ86SE5 291 aaKnown RBP27.02■■□□□ 1.92
SCAMP3-202ENST00000355379 C2CD5Q86YS7 1000 aa27.02■■□□□ 1.92
SCAMP3-202ENST00000355379 GPR101Q96P66 508 aaPredicted RBP27.02■■□□□ 1.92
SCAMP3-202ENST00000355379 DDX11L8A8MPP1 907 aa27.01■■□□□ 1.91
SCAMP3-202ENST00000355379 H0YIN7 160 aa27.01■■□□□ 1.91
SCAMP3-202ENST00000355379 PRKAB2O43741 272 aa27.01■■□□□ 1.91
SCAMP3-202ENST00000355379 FGD1P98174 961 aa27.01■■□□□ 1.91
SCAMP3-202ENST00000355379 TRDNQ13061 729 aa27.01■■□□□ 1.91
SCAMP3-202ENST00000355379 PKP1Q13835 747 aa27.01■■□□□ 1.91
SCAMP3-202ENST00000355379 CCDC125Q86Z20 511 aa27.01■■□□□ 1.91
SCAMP3-202ENST00000355379 BRF1Q92994 677 aa27.01■■□□□ 1.91
SCAMP3-202ENST00000355379 C6orf229H3BNL8 230 aa27■■□□□ 1.91
SCAMP3-202ENST00000355379 PRDX5P30044 214 aa27■■□□□ 1.91
SCAMP3-202ENST00000355379 GIMAP6Q6P9H5 292 aa27■■□□□ 1.91
SCAMP3-202ENST00000355379 NECAB1Q8N987 351 aa27■■□□□ 1.91
SCAMP3-202ENST00000355379 TMX4Q9H1E5 349 aaPredicted RBP27■■□□□ 1.91
SCAMP3-202ENST00000355379 LDHBP07195 334 aaKnown RBP27■■□□□ 1.91
SCAMP3-202ENST00000355379 PDIA4P13667 645 aaKnown RBP27■■□□□ 1.91
SCAMP3-202ENST00000355379 PTMSP20962 102 aa27■■□□□ 1.91
SCAMP3-202ENST00000355379 TDO2P48775 406 aa27■■□□□ 1.91
SCAMP3-202ENST00000355379 EVCP57679 992 aa27■■□□□ 1.91
SCAMP3-202ENST00000355379 TBC1D10CQ8IV04 446 aa27■■□□□ 1.91
SCAMP3-202ENST00000355379 MPNDQ8N594 471 aa27■■□□□ 1.91
SCAMP3-202ENST00000355379 GSTO1P78417 241 aa26.99■■□□□ 1.91
SCAMP3-202ENST00000355379 SLC16A10Q8TF71 515 aa26.99■■□□□ 1.91
SCAMP3-202ENST00000355379 GTF3C6Q969F1 213 aa26.99■■□□□ 1.91
SCAMP3-202ENST00000355379 ZNF274Q96GC6 653 aaPredicted RBP26.99■■□□□ 1.91
SCAMP3-202ENST00000355379 LRRC2Q9BYS8 371 aa26.99■■□□□ 1.91
SCAMP3-202ENST00000355379 WDR33Q9C0J8 1336 aaKnown RBP26.98■■□□□ 1.91
SCAMP3-202ENST00000355379 PRC1O43663 620 aa26.98■■□□□ 1.91
SCAMP3-202ENST00000355379 PFKFB2O60825 505 aa26.98■■□□□ 1.91
SCAMP3-202ENST00000355379 DZIP1Q86YF9 867 aaKnown RBP26.98■■□□□ 1.91
SCAMP3-202ENST00000355379 CHMP4CQ96CF2 233 aa26.98■■□□□ 1.91
SCAMP3-202ENST00000355379 BAG4O95429 457 aaKnown RBP26.97■■□□□ 1.91
SCAMP3-202ENST00000355379 GJB2P29033 226 aa26.97■■□□□ 1.91
SCAMP3-202ENST00000355379 DYNLL1P63167 89 aaKnown RBP26.97■■□□□ 1.91
SCAMP3-202ENST00000355379 ZNF622Q969S3 477 aaKnown RBP eCLIP26.97■■□□□ 1.91
SCAMP3-202ENST00000355379 COA1Q9GZY4 146 aa26.97■■□□□ 1.91
SCAMP3-202ENST00000355379 CNNM2Q9H8M5 875 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms