RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 FGFR1OPO95684 399 aaKnown RBP11.15□□□□□ -0.62
GABPA-201ENST00000354828 GNA11P29992 359 aa11.15□□□□□ -0.62
GABPA-201ENST00000354828 R3HDM1Q15032 1099 aaKnown RBP11.15□□□□□ -0.62
GABPA-201ENST00000354828 NSMFQ6X4W1 530 aa11.15□□□□□ -0.62
GABPA-201ENST00000354828 APPBP2Q92624 585 aa11.15□□□□□ -0.62
GABPA-201ENST00000354828 CALML3P27482 149 aa11.15□□□□□ -0.62
GABPA-201ENST00000354828 NASPP49321 788 aaPredicted RBP11.15□□□□□ -0.62
GABPA-201ENST00000354828 RXRAP19793 462 aa11.15□□□□□ -0.62
GABPA-201ENST00000354828 GADL1Q6ZQY3 521 aa11.15□□□□□ -0.62
GABPA-201ENST00000354828 HOMER2Q9NSB8 354 aa11.15□□□□□ -0.62
GABPA-201ENST00000354828 CIZ1Q9ULV3 898 aaPredicted RBP11.15□□□□□ -0.62
GABPA-201ENST00000354828 PPRC1Q5VV67 1664 aaKnown RBP11.15□□□□□ -0.63
GABPA-201ENST00000354828 SMTNL1A8MU46 457 aa11.15□□□□□ -0.63
GABPA-201ENST00000354828 FKBP15Q5T1M5 1219 aa11.15□□□□□ -0.63
GABPA-201ENST00000354828 TXLNBQ8N3L3 684 aa11.15□□□□□ -0.63
GABPA-201ENST00000354828 LRRC27Q9C0I9 530 aa11.15□□□□□ -0.63
GABPA-201ENST00000354828 GREM2Q9H772 168 aa11.15□□□□□ -0.63
GABPA-201ENST00000354828 GPAA1O43292 621 aa11.14□□□□□ -0.63
GABPA-201ENST00000354828 C21orf2O43822 256 aa11.14□□□□□ -0.63
GABPA-201ENST00000354828 BCAMP50895 628 aa11.14□□□□□ -0.63
GABPA-201ENST00000354828 GOPCQ9HD26 462 aa11.14□□□□□ -0.63
GABPA-201ENST00000354828 ZBTB7BO15156 539 aaPredicted RBP11.14□□□□□ -0.63
GABPA-201ENST00000354828 CCDC174Q6PII3 467 aa11.14□□□□□ -0.63
GABPA-201ENST00000354828 CCDC129Q6ZRS4 1044 aa11.14□□□□□ -0.63
GABPA-201ENST00000354828 SPC24Q8NBT2 197 aa11.14□□□□□ -0.63
GABPA-201ENST00000354828 AXIN2Q9Y2T1 843 aa11.14□□□□□ -0.63
GABPA-201ENST00000354828 NDUFB9Q9Y6M9 179 aa11.14□□□□□ -0.63
GABPA-201ENST00000354828 KIF24Q5T7B8 1368 aa11.14□□□□□ -0.63
GABPA-201ENST00000354828 E9PCH4 1651 aa11.14□□□□□ -0.63
GABPA-201ENST00000354828 CLRN2A0PK11 232 aa11.14□□□□□ -0.63
GABPA-201ENST00000354828 B4E1Z4 1266 aa11.14□□□□□ -0.63
GABPA-201ENST00000354828 NPR1P16066 1061 aa11.14□□□□□ -0.63
GABPA-201ENST00000354828 RTKN2Q8IZC4 609 aa11.14□□□□□ -0.63
GABPA-201ENST00000354828 PPM1FP49593 454 aaPredicted RBP11.14□□□□□ -0.63
GABPA-201ENST00000354828 MAP3K11Q16584 847 aa11.14□□□□□ -0.63
GABPA-201ENST00000354828 CC2D2BQ6DHV5 1058 aa11.14□□□□□ -0.63
GABPA-201ENST00000354828 FSIP1Q8NA03 581 aa11.14□□□□□ -0.63
GABPA-201ENST00000354828 TAOK3Q9H2K8 898 aa11.14□□□□□ -0.63
GABPA-201ENST00000354828 ZNF532Q9HCE3 1301 aa11.13□□□□□ -0.63
GABPA-201ENST00000354828 PABPC4Q13310 644 aaKnown RBP eCLIP11.13□□□□□ -0.63
GABPA-201ENST00000354828 SLC27A3Q5K4L6 730 aa11.13□□□□□ -0.63
GABPA-201ENST00000354828 TTC16Q8NEE8 873 aa11.13□□□□□ -0.63
GABPA-201ENST00000354828 SLC5A4Q9NY91 659 aa11.13□□□□□ -0.63
GABPA-201ENST00000354828 MYCLP12524 364 aaPredicted RBP11.13□□□□□ -0.63
GABPA-201ENST00000354828 ARHGEF6Q15052 776 aa11.13□□□□□ -0.63
GABPA-201ENST00000354828 PROSER3Q2NL68 480 aa11.13□□□□□ -0.63
GABPA-201ENST00000354828 CCDC40Q4G0X9 1142 aa11.13□□□□□ -0.63
GABPA-201ENST00000354828 CACNA2D4Q7Z3S7 1137 aa11.13□□□□□ -0.63
GABPA-201ENST00000354828 LEMD3Q9Y2U8 911 aa11.13□□□□□ -0.63
GABPA-201ENST00000354828 ZMYM4Q5VZL5 1548 aa11.13□□□□□ -0.63
GABPA-201ENST00000354828 NOP56O00567 594 aaKnown RBP11.13□□□□□ -0.63
GABPA-201ENST00000354828 SSFA2P28290 1259 aa11.13□□□□□ -0.63
GABPA-201ENST00000354828 USP8P40818 1118 aa11.13□□□□□ -0.63
GABPA-201ENST00000354828 GPS2Q13227 327 aa11.13□□□□□ -0.63
GABPA-201ENST00000354828 VPS72Q15906 364 aa11.13□□□□□ -0.63
GABPA-201ENST00000354828 ENOX2Q16206 610 aaKnown RBP11.13□□□□□ -0.63
GABPA-201ENST00000354828 MASTLQ96GX5 879 aa11.13□□□□□ -0.63
GABPA-201ENST00000354828 PYM1Q9BRP8 204 aaKnown RBP11.13□□□□□ -0.63
GABPA-201ENST00000354828 MYO6Q9UM54 1294 aa11.13□□□□□ -0.63
GABPA-201ENST00000354828 KDRP35968 1356 aa11.13□□□□□ -0.63
GABPA-201ENST00000354828 PNMA6EA0A0J9YXQ4 647 aa11.13□□□□□ -0.63
GABPA-201ENST00000354828 PRAMEF22A3QJZ6 481 aa11.13□□□□□ -0.63
GABPA-201ENST00000354828 CYP27B1O15528 508 aa11.13□□□□□ -0.63
GABPA-201ENST00000354828 KCNQ2O43526 872 aa11.13□□□□□ -0.63
GABPA-201ENST00000354828 ZNF397Q8NF99 534 aaPredicted RBP11.13□□□□□ -0.63
GABPA-201ENST00000354828 BMP15O95972 392 aa11.12□□□□□ -0.63
GABPA-201ENST00000354828 CFAP100Q494V2 611 aa11.12□□□□□ -0.63
GABPA-201ENST00000354828 CREB3L3Q68CJ9 461 aa11.12□□□□□ -0.63
GABPA-201ENST00000354828 RUFY1Q96T51 708 aa11.12□□□□□ -0.63
GABPA-201ENST00000354828 STX6O43752 255 aa11.12□□□□□ -0.63
GABPA-201ENST00000354828 APOBRQ0VD83 1088 aa11.12□□□□□ -0.63
GABPA-201ENST00000354828 CIAPIN1Q6FI81 312 aa11.12□□□□□ -0.63
GABPA-201ENST00000354828 FNBP4Q8N3X1 1017 aaPredicted RBP11.12□□□□□ -0.63
GABPA-201ENST00000354828 PUF60Q9UHX1 559 aaKnown RBP11.12□□□□□ -0.63
GABPA-201ENST00000354828 DHX32Q7L7V1 743 aaKnown RBP11.12□□□□□ -0.63
GABPA-201ENST00000354828 SPC25Q9HBM1 224 aa11.12□□□□□ -0.63
GABPA-201ENST00000354828 RBM28Q9NW13 759 aaKnown RBP11.12□□□□□ -0.63
GABPA-201ENST00000354828 RAD50Q92878 1312 aa11.12□□□□□ -0.63
GABPA-201ENST00000354828 HEG1Q9ULI3 1381 aa11.12□□□□□ -0.63
GABPA-201ENST00000354828 KDM4FA0A1W2PPD8 638 aa11.12□□□□□ -0.63
GABPA-201ENST00000354828 SUPT20HL1Q3ZLR7 823 aa11.12□□□□□ -0.63
GABPA-201ENST00000354828 GINS2Q9Y248 185 aa11.12□□□□□ -0.63
GABPA-201ENST00000354828 CNGA1P29973 690 aa11.11□□□□□ -0.63
GABPA-201ENST00000354828 SEC31BQ9NQW1 1179 aa11.11□□□□□ -0.63
GABPA-201ENST00000354828 OVOS2A0A0G2JMS6 1433 aa11.11□□□□□ -0.63
GABPA-201ENST00000354828 OVOS2A0A0J9YW53 1432 aa11.11□□□□□ -0.63
GABPA-201ENST00000354828 OVOS2Q6IE36 1432 aa11.11□□□□□ -0.63
GABPA-201ENST00000354828 ERVV-1B6SEH8 477 aa11.11□□□□□ -0.63
GABPA-201ENST00000354828 UBE4AQ14139 1066 aa11.11□□□□□ -0.63
GABPA-201ENST00000354828 KRT79Q5XKE5 535 aa11.11□□□□□ -0.63
GABPA-201ENST00000354828 KIFC2Q96AC6 838 aa11.11□□□□□ -0.63
GABPA-201ENST00000354828 BLMP54132 1417 aaPredicted RBP11.11□□□□□ -0.63
GABPA-201ENST00000354828 PHACTR2O75167 634 aa11.11□□□□□ -0.63
GABPA-201ENST00000354828 BTDP43251 543 aa11.11□□□□□ -0.63
GABPA-201ENST00000354828 ARMC9Q7Z3E5 817 aa11.11□□□□□ -0.63
GABPA-201ENST00000354828 KBTBD3Q8NAB2 608 aa11.11□□□□□ -0.63
GABPA-201ENST00000354828 CLIP2Q9UDT6 1046 aa11.11□□□□□ -0.63
GABPA-201ENST00000354828 TNNT3P45378 269 aaPredicted RBP11.11□□□□□ -0.63
GABPA-201ENST00000354828 MTIF2P46199 727 aaKnown RBP11.11□□□□□ -0.63
GABPA-201ENST00000354828 LRRC24Q50LG9 513 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms