RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 HMGXB3Q12766 1538 aa11.26□□□□□ -0.61
COL11A1-201ENST00000353414 CASC4Q6P4E1 433 aa11.26□□□□□ -0.61
COL11A1-201ENST00000353414 CCDC129Q6ZRS4 1044 aa11.26□□□□□ -0.61
COL11A1-201ENST00000353414 LRRC43Q8N309 656 aa11.26□□□□□ -0.61
COL11A1-201ENST00000353414 RBM17Q96I25 401 aaKnown RBP11.26□□□□□ -0.61
COL11A1-201ENST00000353414 BTG4Q9NY30 223 aa11.26□□□□□ -0.61
COL11A1-201ENST00000353414 EHBP1L1Q8N3D4 1523 aa11.26□□□□□ -0.61
COL11A1-201ENST00000353414 FAM135AQ9P2D6 1515 aa11.26□□□□□ -0.61
COL11A1-201ENST00000353414 hCG_1642624A0A1W2PR95 340 aa11.26□□□□□ -0.61
COL11A1-201ENST00000353414 LPXNO60711 386 aa11.26□□□□□ -0.61
COL11A1-201ENST00000353414 LEO1Q8WVC0 666 aaPredicted RBP11.26□□□□□ -0.61
COL11A1-201ENST00000353414 NYXQ9GZU5 481 aa11.26□□□□□ -0.61
COL11A1-201ENST00000353414 IVNS1ABPQ9Y6Y0 642 aa11.26□□□□□ -0.61
COL11A1-201ENST00000353414 IQGAP2Q13576 1575 aa11.26□□□□□ -0.61
COL11A1-201ENST00000353414 ADGRF5Q8IZF2 1346 aa11.25□□□□□ -0.61
COL11A1-201ENST00000353414 TAF5LO75529 589 aa11.25□□□□□ -0.61
COL11A1-201ENST00000353414 NCAPH2Q6IBW4 605 aa11.25□□□□□ -0.61
COL11A1-201ENST00000353414 USP37Q86T82 979 aa11.25□□□□□ -0.61
COL11A1-201ENST00000353414 AATFQ9NY61 560 aaKnown RBP eCLIP11.25□□□□□ -0.61
COL11A1-201ENST00000353414 GNL1P36915 607 aaPredicted RBP11.25□□□□□ -0.61
COL11A1-201ENST00000353414 DNM1Q05193 864 aaKnown RBP11.25□□□□□ -0.61
COL11A1-201ENST00000353414 LRRC27Q9C0I9 530 aa11.25□□□□□ -0.61
COL11A1-201ENST00000353414 DENND4BO75064 1496 aaPredicted RBP11.25□□□□□ -0.61
COL11A1-201ENST00000353414 MAN1A1P33908 653 aa11.25□□□□□ -0.61
COL11A1-201ENST00000353414 TRPC3Q13507 836 aa11.25□□□□□ -0.61
COL11A1-201ENST00000353414 MCMDC2Q4G0Z9 681 aa11.25□□□□□ -0.61
COL11A1-201ENST00000353414 KANK3Q6NY19 840 aa11.25□□□□□ -0.61
COL11A1-201ENST00000353414 TPTE2Q6XPS3 522 aa11.25□□□□□ -0.61
COL11A1-201ENST00000353414 FMNL3Q8IVF7 1028 aa11.25□□□□□ -0.61
COL11A1-201ENST00000353414 MED10Q9BTT4 135 aa11.25□□□□□ -0.61
COL11A1-201ENST00000353414 STK25O00506 426 aa11.24□□□□□ -0.61
COL11A1-201ENST00000353414 PARP1P09874 1014 aaKnown RBP11.24□□□□□ -0.61
COL11A1-201ENST00000353414 PTPROQ16827 1216 aa11.24□□□□□ -0.61
COL11A1-201ENST00000353414 CALCOCO1Q9P1Z2 691 aa11.24□□□□□ -0.61
COL11A1-201ENST00000353414 KRT79Q5XKE5 535 aa11.24□□□□□ -0.61
COL11A1-201ENST00000353414 FRMD4BQ9Y2L6 1034 aa11.24□□□□□ -0.61
COL11A1-201ENST00000353414 Q3C1V9 767 aa11.24□□□□□ -0.61
COL11A1-201ENST00000353414 TEX11Q8IYF3 940 aa11.24□□□□□ -0.61
COL11A1-201ENST00000353414 RDH13Q8NBN7 331 aa11.24□□□□□ -0.61
COL11A1-201ENST00000353414 SMC6Q96SB8 1091 aa11.24□□□□□ -0.61
COL11A1-201ENST00000353414 PLVAPQ9BX97 442 aa11.24□□□□□ -0.61
COL11A1-201ENST00000353414 TRIM31Q9BZY9 425 aa11.24□□□□□ -0.61
COL11A1-201ENST00000353414 TRIM7Q9C029 511 aa11.24□□□□□ -0.61
COL11A1-201ENST00000353414 WDR97A6NE52 1622 aa11.24□□□□□ -0.61
COL11A1-201ENST00000353414 CYLC1P35663 651 aaPredicted RBP11.24□□□□□ -0.61
COL11A1-201ENST00000353414 GADL1Q6ZQY3 521 aa11.24□□□□□ -0.61
COL11A1-201ENST00000353414 USP48Q86UV5 1035 aa11.24□□□□□ -0.61
COL11A1-201ENST00000353414 TBC1D2Q9BYX2 928 aa11.24□□□□□ -0.61
COL11A1-201ENST00000353414 BZW2Q9Y6E2 419 aaKnown RBP11.24□□□□□ -0.61
COL11A1-201ENST00000353414 WDR44Q5JSH3 913 aa11.24□□□□□ -0.61
COL11A1-201ENST00000353414 BCS1LQ9Y276 419 aa11.24□□□□□ -0.61
COL11A1-201ENST00000353414 LRMPQ12912 555 aa11.24□□□□□ -0.61
COL11A1-201ENST00000353414 ARHGAP27Q6ZUM4 889 aa11.24□□□□□ -0.61
COL11A1-201ENST00000353414 ZNF594Q96JF6 807 aaPredicted RBP11.24□□□□□ -0.61
COL11A1-201ENST00000353414 NDUFB9Q9Y6M9 179 aa11.24□□□□□ -0.61
COL11A1-201ENST00000353414 SYNJ2BP-COX16A0A087WUM0 186 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 GMNNO75496 209 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 DTHD1Q6ZMT9 781 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 ZSCAN30Q86W11 494 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 LARGE2Q8N3Y3 721 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 SMCR8Q8TEV9 937 aaPredicted RBP11.23□□□□□ -0.61
COL11A1-201ENST00000353414 ABCF3Q9NUQ8 709 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 COX16Q9P0S2 106 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 MAGED2Q9UNF1 606 aaPredicted RBP11.23□□□□□ -0.61
COL11A1-201ENST00000353414 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.23□□□□□ -0.61
COL11A1-201ENST00000353414 ITKQ08881 620 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 ZNF569Q5MCW4 686 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 TAB3Q8N5C8 712 aaPredicted RBP11.23□□□□□ -0.61
COL11A1-201ENST00000353414 GOLGA1Q92805 767 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 ARMT1Q9H993 441 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 CAMSAP2Q08AD1 1489 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 SYT1P21579 422 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 ZSCAN23Q3MJ62 389 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 TBC1D10BQ4KMP7 808 aaPredicted RBP11.23□□□□□ -0.61
COL11A1-201ENST00000353414 PSMB7Q99436 277 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 PSMA7O14818 248 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 CEP57Q86XR8 500 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 DDX19AQ9NUU7 478 aaKnown RBP11.23□□□□□ -0.61
COL11A1-201ENST00000353414 SETD1BQ9UPS6 1966 aaKnown RBP11.23□□□□□ -0.61
COL11A1-201ENST00000353414 WDR7Q9Y4E6 1490 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 KRT24Q2M2I5 525 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 GSDMBQ8TAX9 411 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 FAM89AQ96GI7 184 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 IRAK4Q9NWZ3 460 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 GOLGA6CA6NDK9 693 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 GOLGA6BA6NDN3 693 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 IGHDP01880 384 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 GOLGA6DP0CG33 693 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 CPA1P15085 419 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 STRN3Q13033 797 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 RHPN1Q8TCX5 695 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 BICC1Q9H694 974 aaKnown RBP11.23□□□□□ -0.61
COL11A1-201ENST00000353414 GOLGA6AQ9NYA3 693 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 SEPT10Q9P0V9 454 aa11.23□□□□□ -0.61
COL11A1-201ENST00000353414 PIK3R4Q99570 1358 aa11.22□□□□□ -0.61
COL11A1-201ENST00000353414 B4DLN1 442 aa11.22□□□□□ -0.61
COL11A1-201ENST00000353414 GRM8O00222 908 aa11.22□□□□□ -0.61
COL11A1-201ENST00000353414 CALML3P27482 149 aa11.22□□□□□ -0.61
COL11A1-201ENST00000353414 MRPL12P52815 198 aaKnown RBP11.22□□□□□ -0.61
COL11A1-201ENST00000353414 FAM204AQ9H8W3 233 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms