RNA–Protein interactions for RNA: ENST00000353319.8

PTPN2-203, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-203ENST00000353319 ST5P78524 1137 aa12.45□□□□□ -0.42
PTPN2-203ENST00000353319 VPS37DQ86XT2 251 aa12.45□□□□□ -0.42
PTPN2-203ENST00000353319 IFNL3Q8IZI9 196 aa12.45□□□□□ -0.42
PTPN2-203ENST00000353319 AKT1S1Q96B36 256 aa12.45□□□□□ -0.42
PTPN2-203ENST00000353319 MTMR6Q9Y217 621 aa12.45□□□□□ -0.42
PTPN2-203ENST00000353319 GSG1L2A8MUP6 293 aa12.44□□□□□ -0.42
PTPN2-203ENST00000353319 POLRMTO00411 1230 aaKnown RBP12.44□□□□□ -0.42
PTPN2-203ENST00000353319 F13A1P00488 732 aa12.44□□□□□ -0.42
PTPN2-203ENST00000353319 RXRBP28702 533 aa12.44□□□□□ -0.42
PTPN2-203ENST00000353319 FGD1P98174 961 aa12.44□□□□□ -0.42
PTPN2-203ENST00000353319 NLGN1Q8N2Q7 840 aa12.44□□□□□ -0.42
PTPN2-203ENST00000353319 FLAD1Q8NFF5 587 aa12.44□□□□□ -0.42
PTPN2-203ENST00000353319 SMARCC2Q8TAQ2 1214 aa12.44□□□□□ -0.42
PTPN2-203ENST00000353319 NBPF3Q9H094 633 aa12.44□□□□□ -0.42
PTPN2-203ENST00000353319 ISY1Q9ULR0 285 aaKnown RBP12.44□□□□□ -0.42
PTPN2-203ENST00000353319 PRPF40AO75400 957 aaKnown RBP12.43□□□□□ -0.42
PTPN2-203ENST00000353319 BBOX1O75936 387 aa12.43□□□□□ -0.42
PTPN2-203ENST00000353319 MBD4O95243 580 aa12.43□□□□□ -0.42
PTPN2-203ENST00000353319 APBA3O96018 575 aa12.43□□□□□ -0.42
PTPN2-203ENST00000353319 APPP05067 770 aa12.43□□□□□ -0.42
PTPN2-203ENST00000353319 CYP7A1P22680 504 aa12.43□□□□□ -0.42
PTPN2-203ENST00000353319 PDIA3P30101 505 aaKnown RBP12.43□□□□□ -0.42
PTPN2-203ENST00000353319 HAND2P61296 217 aa12.43□□□□□ -0.42
PTPN2-203ENST00000353319 SCRN1Q12765 414 aa12.43□□□□□ -0.42
PTPN2-203ENST00000353319 TRDNQ13061 729 aa12.43□□□□□ -0.42
PTPN2-203ENST00000353319 LARP1BQ659C4 914 aaKnown RBP12.43□□□□□ -0.42
PTPN2-203ENST00000353319 TMEM87AQ8NBN3 555 aa12.43□□□□□ -0.42
PTPN2-203ENST00000353319 RBM17Q96I25 401 aaKnown RBP12.43□□□□□ -0.42
PTPN2-203ENST00000353319 CRAMP1Q96RY5 1269 aa12.43□□□□□ -0.42
PTPN2-203ENST00000353319 NACAP1Q9BZK3 213 aa12.43□□□□□ -0.42
PTPN2-203ENST00000353319 DDX49Q9Y6V7 483 aaKnown RBP12.43□□□□□ -0.42
PTPN2-203ENST00000353319 COL1A1P02452 1464 aaPredicted RBP12.43□□□□□ -0.42
PTPN2-203ENST00000353319 FSD2A1L4K1 749 aa12.42□□□□□ -0.42
PTPN2-203ENST00000353319 PRC1O43663 620 aa12.42□□□□□ -0.42
PTPN2-203ENST00000353319 DDR1Q08345 913 aa12.42□□□□□ -0.42
PTPN2-203ENST00000353319 APOBRQ0VD83 1088 aa12.42□□□□□ -0.42
PTPN2-203ENST00000353319 FOXD4L5Q5VV16 416 aaPredicted RBP12.42□□□□□ -0.42
PTPN2-203ENST00000353319 TMC4Q7Z404 712 aa12.42□□□□□ -0.42
PTPN2-203ENST00000353319 RALYLQ86SE5 291 aaKnown RBP12.42□□□□□ -0.42
PTPN2-203ENST00000353319 FOXD4L4Q8WXT5 416 aaPredicted RBP12.42□□□□□ -0.42
PTPN2-203ENST00000353319 RPGRQ92834 1020 aaKnown RBP12.42□□□□□ -0.42
PTPN2-203ENST00000353319 LRRC2Q9BYS8 371 aa12.42□□□□□ -0.42
PTPN2-203ENST00000353319 ARMT1Q9H993 441 aa12.42□□□□□ -0.42
PTPN2-203ENST00000353319 EPB41L4AQ9HCS5 686 aaPredicted RBP12.42□□□□□ -0.42
PTPN2-203ENST00000353319 ABCF2Q9UG63 623 aa12.42□□□□□ -0.42
PTPN2-203ENST00000353319 XDHP47989 1333 aa12.42□□□□□ -0.42
PTPN2-203ENST00000353319 CACNA1SQ13698 1873 aa12.42□□□□□ -0.42
PTPN2-203ENST00000353319 KLRK1P26718 216 aa12.42□□□□□ -0.42
PTPN2-203ENST00000353319 ANTXR2P58335 489 aa12.42□□□□□ -0.42
PTPN2-203ENST00000353319 HMGN5P82970 282 aaKnown RBP12.42□□□□□ -0.42
PTPN2-203ENST00000353319 STK3Q13188 491 aa12.42□□□□□ -0.42
PTPN2-203ENST00000353319 LCORLQ8N3X6 602 aa12.42□□□□□ -0.42
PTPN2-203ENST00000353319 MTA3Q9BTC8 594 aa12.42□□□□□ -0.42
PTPN2-203ENST00000353319 NAPBQ9H115 298 aa12.42□□□□□ -0.42
PTPN2-203ENST00000353319 RAI14Q9P0K7 980 aa12.42□□□□□ -0.42
PTPN2-203ENST00000353319 IQSEC3Q9UPP2 1182 aaPredicted RBP12.42□□□□□ -0.42
PTPN2-203ENST00000353319 SLC4A4Q9Y6R1 1079 aa12.42□□□□□ -0.42
PTPN2-203ENST00000353319 SALL1Q9NSC2 1324 aa12.41□□□□□ -0.42
PTPN2-203ENST00000353319 MAGEB6P1A0A0J9YX57 407 aa12.41□□□□□ -0.42
PTPN2-203ENST00000353319 MBD3O95983 291 aa12.41□□□□□ -0.42
PTPN2-203ENST00000353319 ATP2B4P23634 1241 aa12.41□□□□□ -0.42
PTPN2-203ENST00000353319 NAA16Q6N069 864 aaPredicted RBP12.41□□□□□ -0.42
PTPN2-203ENST00000353319 GIMAP6Q6P9H5 292 aa12.41□□□□□ -0.42
PTPN2-203ENST00000353319 TBC1D10CQ8IV04 446 aa12.41□□□□□ -0.42
PTPN2-203ENST00000353319 RGS22Q8NE09 1264 aa12.41□□□□□ -0.42
PTPN2-203ENST00000353319 NSUN7Q8NE18 718 aaKnown RBP12.41□□□□□ -0.42
PTPN2-203ENST00000353319 TDRD7Q8NHU6 1098 aaKnown RBP12.41□□□□□ -0.42
PTPN2-203ENST00000353319 TMEM87BQ96K49 555 aa12.41□□□□□ -0.42
PTPN2-203ENST00000353319 RIOK1Q9BRS2 568 aaKnown RBP12.41□□□□□ -0.42
PTPN2-203ENST00000353319 CNNM2Q9H8M5 875 aa12.41□□□□□ -0.42
PTPN2-203ENST00000353319 PODXL2Q9NZ53 605 aa12.41□□□□□ -0.42
PTPN2-203ENST00000353319 TFCP2L1Q9NZI6 479 aa12.41□□□□□ -0.42
PTPN2-203ENST00000353319 ANAPC4Q9UJX5 808 aa12.41□□□□□ -0.42
PTPN2-203ENST00000353319 CTDNEP1O95476 244 aa12.4□□□□□ -0.42
PTPN2-203ENST00000353319 ZNF827Q17R98 1081 aa12.4□□□□□ -0.42
PTPN2-203ENST00000353319 AKNAD1Q5T1N1 836 aa12.4□□□□□ -0.42
PTPN2-203ENST00000353319 L1TD1Q5T7N2 865 aaKnown RBP12.4□□□□□ -0.42
PTPN2-203ENST00000353319 SPTY2D1Q68D10 685 aaPredicted RBP12.4□□□□□ -0.42
PTPN2-203ENST00000353319 ADGRA1Q86SQ6 560 aa12.4□□□□□ -0.42
PTPN2-203ENST00000353319 TXNRD3Q86VQ6 643 aa12.4□□□□□ -0.42
PTPN2-203ENST00000353319 COL23A1Q86Y22 540 aaPredicted RBP12.4□□□□□ -0.42
PTPN2-203ENST00000353319 ZNF384Q8TF68 577 aa12.4□□□□□ -0.42
PTPN2-203ENST00000353319 STAG1Q8WVM7 1258 aa12.4□□□□□ -0.42
PTPN2-203ENST00000353319 NSUN4Q96CB9 384 aaKnown RBP12.4□□□□□ -0.42
PTPN2-203ENST00000353319 BRIP1Q9BX63 1249 aa12.4□□□□□ -0.42
PTPN2-203ENST00000353319 GZF1Q9H116 711 aaPredicted RBP12.4□□□□□ -0.42
PTPN2-203ENST00000353319 ANKIB1Q9P2G1 1089 aa12.4□□□□□ -0.42
PTPN2-203ENST00000353319 KIF3AQ9Y496 699 aa12.4□□□□□ -0.42
PTPN2-203ENST00000353319 NRXN2Q9P2S2 1712 aa12.4□□□□□ -0.42
PTPN2-203ENST00000353319 RGPD3A6NKT7 1758 aaPredicted RBP12.4□□□□□ -0.43
PTPN2-203ENST00000353319 RGPD4Q7Z3J3 1758 aa12.4□□□□□ -0.43
PTPN2-203ENST00000353319 PRKAB2O43741 272 aa12.39□□□□□ -0.43
PTPN2-203ENST00000353319 DHX16O60231 1041 aaKnown RBP12.39□□□□□ -0.43
PTPN2-203ENST00000353319 JAK2O60674 1132 aa12.39□□□□□ -0.43
PTPN2-203ENST00000353319 CHST3Q7LGC8 479 aa12.39□□□□□ -0.43
PTPN2-203ENST00000353319 WDR66Q8TBY9 1149 aa12.39□□□□□ -0.43
PTPN2-203ENST00000353319 GPT2Q8TD30 523 aa12.39□□□□□ -0.43
PTPN2-203ENST00000353319 CHAMP1Q96JM3 812 aa12.39□□□□□ -0.43
PTPN2-203ENST00000353319 KRT23Q9C075 422 aa12.39□□□□□ -0.43
PTPN2-203ENST00000353319 BRPF3Q9ULD4 1205 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms