RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 PTPN12Q05209 780 aaKnown RBP14.02□□□□□ -0.17
SMAD9-201ENST00000350148 H0YIN7 160 aa14.01□□□□□ -0.17
SMAD9-201ENST00000350148 CEP89Q96ST8 783 aa14.01□□□□□ -0.17
SMAD9-201ENST00000350148 LRRC27Q9C0I9 530 aa14.01□□□□□ -0.17
SMAD9-201ENST00000350148 SYCE3A1L190 88 aa14.01□□□□□ -0.17
SMAD9-201ENST00000350148 APBA3O96018 575 aa14.01□□□□□ -0.17
SMAD9-201ENST00000350148 CCDC70Q6NSX1 233 aa14.01□□□□□ -0.17
SMAD9-201ENST00000350148 KRT27Q7Z3Y8 459 aa14.01□□□□□ -0.17
SMAD9-201ENST00000350148 ISCA1Q9BUE6 129 aa14.01□□□□□ -0.17
SMAD9-201ENST00000350148 ABCC12Q96J65 1359 aa14.01□□□□□ -0.17
SMAD9-201ENST00000350148 SAMD1Q6SPF0 538 aaPredicted RBP14.01□□□□□ -0.17
SMAD9-201ENST00000350148 FSIP1Q8NA03 581 aa14.01□□□□□ -0.17
SMAD9-201ENST00000350148 MCM9Q9NXL9 1143 aa14.01□□□□□ -0.17
SMAD9-201ENST00000350148 ZNF76P36508 570 aa14.01□□□□□ -0.17
SMAD9-201ENST00000350148 TXLNBQ8N3L3 684 aa14.01□□□□□ -0.17
SMAD9-201ENST00000350148 EPS15P42566 896 aa14.01□□□□□ -0.17
SMAD9-201ENST00000350148 IRX3P78415 501 aaPredicted RBP14.01□□□□□ -0.17
SMAD9-201ENST00000350148 GTPBP4Q9BZE4 634 aaKnown RBP14.01□□□□□ -0.17
SMAD9-201ENST00000350148 ANGEL1Q9UNK9 670 aaKnown RBP14.01□□□□□ -0.17
SMAD9-201ENST00000350148 IGKV5-2P06315 115 aa14□□□□□ -0.17
SMAD9-201ENST00000350148 ADCY9O60503 1353 aa14□□□□□ -0.17
SMAD9-201ENST00000350148 IGSF3O75054 1194 aa14□□□□□ -0.17
SMAD9-201ENST00000350148 CCDC102BQ68D86 513 aa14□□□□□ -0.17
SMAD9-201ENST00000350148 GREM2Q9H772 168 aa14□□□□□ -0.17
SMAD9-201ENST00000350148 ZNF532Q9HCE3 1301 aa14□□□□□ -0.17
SMAD9-201ENST00000350148 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14□□□□□ -0.17
SMAD9-201ENST00000350148 PTPDC1A2A3K4 754 aa14□□□□□ -0.17
SMAD9-201ENST00000350148 SERPINC1P01008 464 aa14□□□□□ -0.17
SMAD9-201ENST00000350148 CYP19A1P11511 503 aaPredicted RBP14□□□□□ -0.17
SMAD9-201ENST00000350148 CLCN1P35523 988 aa14□□□□□ -0.17
SMAD9-201ENST00000350148 KIF20AO95235 890 aa14□□□□□ -0.17
SMAD9-201ENST00000350148 USPL1Q5W0Q7 1092 aa14□□□□□ -0.17
SMAD9-201ENST00000350148 DBNLQ9UJU6 430 aaKnown RBP14□□□□□ -0.17
SMAD9-201ENST00000350148 STX1AQ16623 288 aa13.99□□□□□ -0.17
SMAD9-201ENST00000350148 LRRC24Q50LG9 513 aa13.99□□□□□ -0.17
SMAD9-201ENST00000350148 ZSWIM6Q9HCJ5 1215 aa13.99□□□□□ -0.17
SMAD9-201ENST00000350148 GUCY1B3Q02153 619 aa13.99□□□□□ -0.17
SMAD9-201ENST00000350148 APOBRQ0VD83 1088 aa13.99□□□□□ -0.17
SMAD9-201ENST00000350148 ZMYM1Q5SVZ6 1142 aa13.99□□□□□ -0.17
SMAD9-201ENST00000350148 PLA2G12BQ9BX93 195 aa13.99□□□□□ -0.17
SMAD9-201ENST00000350148 SPATA31A1Q5TZJ5 1347 aa13.99□□□□□ -0.17
SMAD9-201ENST00000350148 RPAP1Q9BWH6 1393 aaPredicted RBP13.99□□□□□ -0.17
SMAD9-201ENST00000350148 NEFHP12036 1026 aa13.99□□□□□ -0.17
SMAD9-201ENST00000350148 MIGA1Q8NAN2 632 aa13.99□□□□□ -0.17
SMAD9-201ENST00000350148 MAP4K1Q92918 833 aa13.99□□□□□ -0.17
SMAD9-201ENST00000350148 LARP6Q9BRS8 491 aaKnown RBP13.99□□□□□ -0.17
SMAD9-201ENST00000350148 ARPP21Q9UBL0 812 aaPredicted RBP13.99□□□□□ -0.17
SMAD9-201ENST00000350148 AMPD3Q01432 767 aa13.99□□□□□ -0.17
SMAD9-201ENST00000350148 RGS12O14924 1447 aa13.98□□□□□ -0.17
SMAD9-201ENST00000350148 CHRNDQ07001 517 aa13.98□□□□□ -0.17
SMAD9-201ENST00000350148 DPP8Q6V1X1 898 aaPredicted RBP13.98□□□□□ -0.17
SMAD9-201ENST00000350148 NAP1L4Q99733 375 aaKnown RBP13.98□□□□□ -0.17
SMAD9-201ENST00000350148 LSG1Q9H089 658 aaKnown RBP13.98□□□□□ -0.17
SMAD9-201ENST00000350148 TSPYL1Q9H0U9 437 aa13.98□□□□□ -0.17
SMAD9-201ENST00000350148 HOMER1Q86YM7 354 aa13.98□□□□□ -0.17
SMAD9-201ENST00000350148 ZNF274Q96GC6 653 aaPredicted RBP13.98□□□□□ -0.17
SMAD9-201ENST00000350148 DEF6Q9H4E7 631 aa13.98□□□□□ -0.17
SMAD9-201ENST00000350148 TEX11Q8IYF3 940 aa13.98□□□□□ -0.17
SMAD9-201ENST00000350148 LZTS2Q9BRK4 669 aa13.98□□□□□ -0.17
SMAD9-201ENST00000350148 TAF5LO75529 589 aa13.98□□□□□ -0.17
SMAD9-201ENST00000350148 BBOX1O75936 387 aa13.98□□□□□ -0.17
SMAD9-201ENST00000350148 SLC27A3Q5K4L6 730 aa13.98□□□□□ -0.17
SMAD9-201ENST00000350148 SEPT12Q8IYM1 358 aa13.98□□□□□ -0.17
SMAD9-201ENST00000350148 LRRC2Q9BYS8 371 aa13.98□□□□□ -0.17
SMAD9-201ENST00000350148 TCP11L1Q9NUJ3 509 aa13.98□□□□□ -0.17
SMAD9-201ENST00000350148 FGFR1OPO95684 399 aaKnown RBP13.97□□□□□ -0.17
SMAD9-201ENST00000350148 CCDC129Q6ZRS4 1044 aa13.97□□□□□ -0.17
SMAD9-201ENST00000350148 CNNM3Q8NE01 707 aa13.97□□□□□ -0.17
SMAD9-201ENST00000350148 ARMT1Q9H993 441 aa13.97□□□□□ -0.17
SMAD9-201ENST00000350148 STX8Q9UNK0 236 aa13.97□□□□□ -0.17
SMAD9-201ENST00000350148 LRSAM1Q6UWE0 723 aa13.97□□□□□ -0.17
SMAD9-201ENST00000350148 NARFQ9UHQ1 456 aa13.97□□□□□ -0.17
SMAD9-201ENST00000350148 XDHP47989 1333 aa13.97□□□□□ -0.17
SMAD9-201ENST00000350148 RC3H1Q5TC82 1133 aaKnown RBP13.97□□□□□ -0.17
SMAD9-201ENST00000350148 PPFIBP1Q86W92 1011 aa13.97□□□□□ -0.17
SMAD9-201ENST00000350148 CERKQ8TCT0 537 aa13.97□□□□□ -0.17
SMAD9-201ENST00000350148 MON2Q7Z3U7 1717 aa13.97□□□□□ -0.17
SMAD9-201ENST00000350148 PDE6AP16499 860 aa13.97□□□□□ -0.17
SMAD9-201ENST00000350148 SYT1P21579 422 aa13.97□□□□□ -0.17
SMAD9-201ENST00000350148 RXRBP28702 533 aa13.97□□□□□ -0.17
SMAD9-201ENST00000350148 RABL6Q3YEC7 729 aaPredicted RBP13.97□□□□□ -0.17
SMAD9-201ENST00000350148 JDP2Q8WYK2 163 aa13.97□□□□□ -0.17
SMAD9-201ENST00000350148 MRPS27Q92552 414 aaKnown RBP13.97□□□□□ -0.17
SMAD9-201ENST00000350148 TCEANC2Q96MN5 208 aa13.97□□□□□ -0.17
SMAD9-201ENST00000350148 DEXIO95424 95 aa13.97□□□□□ -0.17
SMAD9-201ENST00000350148 HOMEZQ8IX15 550 aa13.97□□□□□ -0.17
SMAD9-201ENST00000350148 C6orf50Q9HD87 102 aa13.97□□□□□ -0.17
SMAD9-201ENST00000350148 ZNHIT6Q9NWK9 470 aaKnown RBP13.97□□□□□ -0.17
SMAD9-201ENST00000350148 ZNF219Q9P2Y4 722 aaPredicted RBP13.97□□□□□ -0.17
SMAD9-201ENST00000350148 TNNI2P48788 182 aa13.96□□□□□ -0.17
SMAD9-201ENST00000350148 GLT8D2Q9H1C3 349 aa13.96□□□□□ -0.17
SMAD9-201ENST00000350148 USP48Q86UV5 1035 aa13.96□□□□□ -0.17
SMAD9-201ENST00000350148 TTLL11Q8NHH1 800 aa13.96□□□□□ -0.17
SMAD9-201ENST00000350148 CNKSR1Q969H4 720 aa13.96□□□□□ -0.17
SMAD9-201ENST00000350148 TFIP11Q9UBB9 837 aaKnown RBP13.96□□□□□ -0.17
SMAD9-201ENST00000350148 A0A0D9SFI3 127 aa13.96□□□□□ -0.17
SMAD9-201ENST00000350148 E7EWF7 191 aa13.96□□□□□ -0.17
SMAD9-201ENST00000350148 SASH1O94885 1247 aa13.96□□□□□ -0.17
SMAD9-201ENST00000350148 PI4K2BQ8TCG2 481 aa13.96□□□□□ -0.17
SMAD9-201ENST00000350148 CALML4Q96GE6 196 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms