RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 KIF23Q02241 960 aaPredicted RBP21.04■□□□□ 0.96
PTP4A3-202ENST00000349124 SLC9C2Q5TAH2 1124 aa21.04■□□□□ 0.96
PTP4A3-202ENST00000349124 LDHAL6AQ6ZMR3 332 aa21.04■□□□□ 0.96
PTP4A3-202ENST00000349124 XPO4Q9C0E2 1151 aaKnown RBP21.04■□□□□ 0.96
PTP4A3-202ENST00000349124 IFNKQ9P0W0 207 aa21.04■□□□□ 0.96
PTP4A3-202ENST00000349124 SYNE3Q6ZMZ3 975 aa21.04■□□□□ 0.96
PTP4A3-202ENST00000349124 IGSF3O75054 1194 aa21.03■□□□□ 0.96
PTP4A3-202ENST00000349124 SMC2O95347 1197 aa21.03■□□□□ 0.96
PTP4A3-202ENST00000349124 PTPN14Q15678 1187 aa21.03■□□□□ 0.96
PTP4A3-202ENST00000349124 PTPN21Q16825 1174 aa21.03■□□□□ 0.96
PTP4A3-202ENST00000349124 ANO1Q5XXA6 986 aa21.03■□□□□ 0.96
PTP4A3-202ENST00000349124 MYL10Q9BUA6 226 aa21.03■□□□□ 0.96
PTP4A3-202ENST00000349124 POLR3EQ9NVU0 708 aa21.03■□□□□ 0.96
PTP4A3-202ENST00000349124 SNAP23O00161 211 aa21.03■□□□□ 0.96
PTP4A3-202ENST00000349124 IDH1O75874 414 aaKnown RBP21.03■□□□□ 0.96
PTP4A3-202ENST00000349124 ZFYP08048 801 aaPredicted RBP21.03■□□□□ 0.96
PTP4A3-202ENST00000349124 SLC3A2P08195 630 aaKnown RBP21.03■□□□□ 0.96
PTP4A3-202ENST00000349124 PFKFB1P16118 471 aa21.03■□□□□ 0.96
PTP4A3-202ENST00000349124 CADPS2Q86UW7 1296 aa21.03■□□□□ 0.96
PTP4A3-202ENST00000349124 KCNG4Q8TDN1 519 aa21.03■□□□□ 0.96
PTP4A3-202ENST00000349124 PIH1D3Q9NQM4 214 aaKnown RBP21.03■□□□□ 0.96
PTP4A3-202ENST00000349124 RIPOR2Q9Y4F9 1068 aa21.03■□□□□ 0.96
PTP4A3-202ENST00000349124 CSF1RP07333 972 aa21.02■□□□□ 0.96
PTP4A3-202ENST00000349124 IL2RBP14784 551 aa21.02■□□□□ 0.96
PTP4A3-202ENST00000349124 CDC27P30260 824 aa21.02■□□□□ 0.96
PTP4A3-202ENST00000349124 HELBQ8NG08 1087 aaPredicted RBP21.02■□□□□ 0.96
PTP4A3-202ENST00000349124 PAXBP1Q9Y5B6 917 aa21.02■□□□□ 0.96
PTP4A3-202ENST00000349124 ITGA6P23229 1130 aa21.02■□□□□ 0.96
PTP4A3-202ENST00000349124 NYAP1Q6ZVC0 841 aa21.02■□□□□ 0.96
PTP4A3-202ENST00000349124 NAT10Q9H0A0 1025 aaKnown RBP21.02■□□□□ 0.96
PTP4A3-202ENST00000349124 MROH7-TTC4A0A0A0MT08 1334 aa21.02■□□□□ 0.96
PTP4A3-202ENST00000349124 KIF1AQ12756 1690 aa21.02■□□□□ 0.95
PTP4A3-202ENST00000349124 B4E1Z4 1266 aa21.01■□□□□ 0.95
PTP4A3-202ENST00000349124 DHX16O60231 1041 aaKnown RBP21.01■□□□□ 0.95
PTP4A3-202ENST00000349124 LMOD1P29536 600 aaPredicted RBP21.01■□□□□ 0.95
PTP4A3-202ENST00000349124 CCAR2Q8N163 923 aaKnown RBP21.01■□□□□ 0.95
PTP4A3-202ENST00000349124 YEATS4O95619 227 aa21.01■□□□□ 0.95
PTP4A3-202ENST00000349124 PCCAP05165 728 aaPredicted RBP21.01■□□□□ 0.95
PTP4A3-202ENST00000349124 ATP1A3P13637 1013 aa21.01■□□□□ 0.95
PTP4A3-202ENST00000349124 NKX1-1Q15270 411 aaPredicted RBP21.01■□□□□ 0.95
PTP4A3-202ENST00000349124 ZRSR1Q15695 479 aaKnown RBP21.01■□□□□ 0.95
PTP4A3-202ENST00000349124 TMC6Q7Z403 805 aa21.01■□□□□ 0.95
PTP4A3-202ENST00000349124 ZBTB38Q8NAP3 1195 aaPredicted RBP21.01■□□□□ 0.95
PTP4A3-202ENST00000349124 CLIC6Q96NY7 704 aa21.01■□□□□ 0.95
PTP4A3-202ENST00000349124 ZNF215Q9UL58 517 aaPredicted RBP21.01■□□□□ 0.95
PTP4A3-202ENST00000349124 KCPQ6ZWJ8 1503 aa21.01■□□□□ 0.95
PTP4A3-202ENST00000349124 NCAPHQ15003 741 aa21■□□□□ 0.95
PTP4A3-202ENST00000349124 ARMCX5Q6P1M9 558 aa21■□□□□ 0.95
PTP4A3-202ENST00000349124 MICU3Q86XE3 530 aa21■□□□□ 0.95
PTP4A3-202ENST00000349124 TTLL11Q8NHH1 800 aa21■□□□□ 0.95
PTP4A3-202ENST00000349124 ALG1Q9BT22 464 aa21■□□□□ 0.95
PTP4A3-202ENST00000349124 ZHX1Q9UKY1 873 aaPredicted RBP21■□□□□ 0.95
PTP4A3-202ENST00000349124 CPDO75976 1380 aa21■□□□□ 0.95
PTP4A3-202ENST00000349124 TJP1Q07157 1748 aa21■□□□□ 0.95
PTP4A3-202ENST00000349124 NPHP1O15259 732 aa20.99■□□□□ 0.95
PTP4A3-202ENST00000349124 ADD2P35612 726 aa20.99■□□□□ 0.95
PTP4A3-202ENST00000349124 LRRFIP1Q32MZ4 808 aaKnown RBP20.99■□□□□ 0.95
PTP4A3-202ENST00000349124 BRINP3Q76B58 766 aa20.99■□□□□ 0.95
PTP4A3-202ENST00000349124 PIGBQ92521 554 aa20.99■□□□□ 0.95
PTP4A3-202ENST00000349124 CNNM1Q9NRU3 951 aa20.99■□□□□ 0.95
PTP4A3-202ENST00000349124 NWD2Q9ULI1 1742 aa20.99■□□□□ 0.95
PTP4A3-202ENST00000349124 PHKA1P46020 1223 aa20.99■□□□□ 0.95
PTP4A3-202ENST00000349124 TICAM2Q86XR7 235 aa20.99■□□□□ 0.95
PTP4A3-202ENST00000349124 TMOD3Q9NYL9 352 aa20.99■□□□□ 0.95
PTP4A3-202ENST00000349124 WWC3Q9ULE0 1092 aa20.99■□□□□ 0.95
PTP4A3-202ENST00000349124 NEMFO60524 1076 aa20.98■□□□□ 0.95
PTP4A3-202ENST00000349124 E4F1Q66K89 784 aaPredicted RBP20.98■□□□□ 0.95
PTP4A3-202ENST00000349124 BRAPQ7Z569 592 aa20.98■□□□□ 0.95
PTP4A3-202ENST00000349124 VPS37DQ86XT2 251 aa20.98■□□□□ 0.95
PTP4A3-202ENST00000349124 STK11IPQ8N1F8 1099 aa20.98■□□□□ 0.95
PTP4A3-202ENST00000349124 ADAMTSL3P82987 1691 aa20.98■□□□□ 0.95
PTP4A3-202ENST00000349124 METAP2P50579 478 aaKnown RBP eCLIP20.98■□□□□ 0.95
PTP4A3-202ENST00000349124 KRT40Q6A162 431 aa20.98■□□□□ 0.95
PTP4A3-202ENST00000349124 ANGEL1Q9UNK9 670 aaKnown RBP20.98■□□□□ 0.95
PTP4A3-202ENST00000349124 ZNF532Q9HCE3 1301 aa20.98■□□□□ 0.95
PTP4A3-202ENST00000349124 CMA1P23946 247 aa20.98■□□□□ 0.95
PTP4A3-202ENST00000349124 TRDNQ13061 729 aa20.98■□□□□ 0.95
PTP4A3-202ENST00000349124 TRIM28Q13263 835 aaKnown RBP20.98■□□□□ 0.95
PTP4A3-202ENST00000349124 SPECC1Q5M775 1068 aa20.98■□□□□ 0.95
PTP4A3-202ENST00000349124 SHC4Q6S5L8 630 aa20.98■□□□□ 0.95
PTP4A3-202ENST00000349124 KIF6Q6ZMV9 814 aa20.98■□□□□ 0.95
PTP4A3-202ENST00000349124 PKD1L3Q7Z443 1732 aa20.97■□□□□ 0.95
PTP4A3-202ENST00000349124 NLRP12P59046 1061 aa20.97■□□□□ 0.95
PTP4A3-202ENST00000349124 SLC39A14Q15043 492 aa20.97■□□□□ 0.95
PTP4A3-202ENST00000349124 HSD3B7Q9H2F3 369 aa20.97■□□□□ 0.95
PTP4A3-202ENST00000349124 HSPA2P54652 639 aa20.97■□□□□ 0.95
PTP4A3-202ENST00000349124 PNOCQ13519 176 aa20.97■□□□□ 0.95
PTP4A3-202ENST00000349124 DPF2Q92785 391 aa20.97■□□□□ 0.95
PTP4A3-202ENST00000349124 TACC3Q9Y6A5 838 aa20.97■□□□□ 0.95
PTP4A3-202ENST00000349124 EVA1CP58658 441 aa20.96■□□□□ 0.95
PTP4A3-202ENST00000349124 GOLGA8FQ08AF8 430 aa20.96■□□□□ 0.95
PTP4A3-202ENST00000349124 GOLGA8DPQ0D2H9 430 aa20.96■□□□□ 0.95
PTP4A3-202ENST00000349124 APOA5Q6Q788 366 aa20.96■□□□□ 0.95
PTP4A3-202ENST00000349124 NLRP10Q86W26 655 aa20.96■□□□□ 0.95
PTP4A3-202ENST00000349124 CHMP4CQ96CF2 233 aa20.96■□□□□ 0.95
PTP4A3-202ENST00000349124 OSBPL5Q9H0X9 879 aaPredicted RBP20.96■□□□□ 0.95
PTP4A3-202ENST00000349124 RIC1Q4ADV7 1423 aa20.96■□□□□ 0.95
PTP4A3-202ENST00000349124 SH2B2O14492 632 aaPredicted RBP20.96■□□□□ 0.95
PTP4A3-202ENST00000349124 RANBP6O60518 1105 aaKnown RBP20.95■□□□□ 0.94
PTP4A3-202ENST00000349124 SYKP43405 635 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms