RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 VPS18Q9P253 973 aa11.88□□□□□ -0.51
CHRNA1-202ENST00000348749 RAB21Q9UL25 225 aa11.88□□□□□ -0.51
CHRNA1-202ENST00000348749 NEDD4P46934 1319 aa11.88□□□□□ -0.51
CHRNA1-202ENST00000348749 SH3TC1Q8TE82 1336 aa11.88□□□□□ -0.51
CHRNA1-202ENST00000348749 SPEF2Q9C093 1822 aa11.88□□□□□ -0.51
CHRNA1-202ENST00000348749 MYO1BO43795 1136 aa11.88□□□□□ -0.51
CHRNA1-202ENST00000348749 ANXA1P04083 346 aa11.88□□□□□ -0.51
CHRNA1-202ENST00000348749 TUBB4BP68371 445 aa11.88□□□□□ -0.51
CHRNA1-202ENST00000348749 MCMDC2Q4G0Z9 681 aa11.88□□□□□ -0.51
CHRNA1-202ENST00000348749 BEND6Q5SZJ8 279 aaPredicted RBP11.88□□□□□ -0.51
CHRNA1-202ENST00000348749 MPRIPQ6WCQ1 1025 aa11.88□□□□□ -0.51
CHRNA1-202ENST00000348749 ZNF589Q86UQ0 364 aaPredicted RBP11.88□□□□□ -0.51
CHRNA1-202ENST00000348749 EFCAB13Q8IY85 973 aa11.88□□□□□ -0.51
CHRNA1-202ENST00000348749 FBXL16Q8N461 479 aa11.88□□□□□ -0.51
CHRNA1-202ENST00000348749 FTOQ9C0B1 505 aaKnown RBP eCLIP11.88□□□□□ -0.51
CHRNA1-202ENST00000348749 TAF6LQ9Y6J9 622 aa11.88□□□□□ -0.51
CHRNA1-202ENST00000348749 NEURL1BA8MQ27 555 aa11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 ME1P48163 572 aa11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 PROSER3Q2NL68 480 aa11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 Q6ZUG5 572 aa11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 MSANTD4Q8NCY6 345 aa11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 WDR24Q96S15 920 aa11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 HAUS7Q99871 368 aa11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 PDE11AQ9HCR9 933 aa11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 LAMA4Q16363 1823 aa11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 PALLDQ8WX93 1383 aa11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 PXDNQ92626 1479 aa11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 SCN11AQ9UI33 1791 aa11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 CLGNO14967 610 aa11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 IGKV5-2P06315 115 aa11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 KCNA6P17658 529 aa11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 GNG11P61952 73 aa11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 GCKRQ14397 625 aa11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 PDIA6Q15084 440 aa11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 RABL6Q3YEC7 729 aaPredicted RBP11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 MCTP2Q6DN12 878 aa11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 DHX32Q7L7V1 743 aaKnown RBP11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 CCDC91Q7Z6B0 441 aa11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 VSTM4Q8IW00 320 aa11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 NSUN7Q8NE18 718 aaKnown RBP11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 FAM71BQ8TC56 605 aa11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 ERCC4Q92889 916 aaPredicted RBP11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 DRC1Q96MC2 740 aa11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 CEP89Q96ST8 783 aa11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 METTL22Q9BUU2 404 aaPredicted RBP11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 DSCC1Q9BVC3 393 aa11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 HSD3B7Q9H2F3 369 aa11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 RNF216Q9NWF9 866 aaPredicted RBP11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 TLR7Q9NYK1 1049 aaKnown RBP11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 RTEL1Q9NZ71 1219 aa11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 PCDHA7Q9UN72 937 aa11.87□□□□□ -0.51
CHRNA1-202ENST00000348749 TMEM94Q12767 1356 aa11.86□□□□□ -0.51
CHRNA1-202ENST00000348749 FER1L4A9Z1Z3 1794 aa11.86□□□□□ -0.51
CHRNA1-202ENST00000348749 ERLIN1O75477 346 aa11.86□□□□□ -0.51
CHRNA1-202ENST00000348749 GSCP56915 257 aaPredicted RBP11.86□□□□□ -0.51
CHRNA1-202ENST00000348749 SCRN1Q12765 414 aa11.86□□□□□ -0.51
CHRNA1-202ENST00000348749 TNNI3KQ59H18 835 aa11.86□□□□□ -0.51
CHRNA1-202ENST00000348749 FOXR1Q6PIV2 292 aa11.86□□□□□ -0.51
CHRNA1-202ENST00000348749 LRRC31Q6UY01 552 aa11.86□□□□□ -0.51
CHRNA1-202ENST00000348749 MMS22LQ6ZRQ5 1243 aa11.86□□□□□ -0.51
CHRNA1-202ENST00000348749 RIC3Q7Z5B4 369 aa11.86□□□□□ -0.51
CHRNA1-202ENST00000348749 FBXW7Q969H0 707 aa11.86□□□□□ -0.51
CHRNA1-202ENST00000348749 HELLSQ9NRZ9 838 aa11.86□□□□□ -0.51
CHRNA1-202ENST00000348749 FPGT-TNNI3KV9GXZ4 949 aa11.86□□□□□ -0.51
CHRNA1-202ENST00000348749 ZNF609O15014 1411 aa11.85□□□□□ -0.51
CHRNA1-202ENST00000348749 SLC3A2P08195 630 aaKnown RBP11.85□□□□□ -0.51
CHRNA1-202ENST00000348749 HSP90B1P14625 803 aaKnown RBP11.85□□□□□ -0.51
CHRNA1-202ENST00000348749 NDUFA8P51970 172 aa11.85□□□□□ -0.51
CHRNA1-202ENST00000348749 UBASH3AP57075 661 aa11.85□□□□□ -0.51
CHRNA1-202ENST00000348749 SRGAP1Q7Z6B7 1085 aa11.85□□□□□ -0.51
CHRNA1-202ENST00000348749 ARHGEF25Q86VW2 580 aa11.85□□□□□ -0.51
CHRNA1-202ENST00000348749 DHX58Q96C10 678 aa11.85□□□□□ -0.51
CHRNA1-202ENST00000348749 ZNF274Q96GC6 653 aaPredicted RBP11.85□□□□□ -0.51
CHRNA1-202ENST00000348749 GPR108Q9NPR9 543 aa11.85□□□□□ -0.51
CHRNA1-202ENST00000348749 L1RE1Q9UN81 338 aa11.85□□□□□ -0.51
CHRNA1-202ENST00000348749 SALL1Q9NSC2 1324 aa11.85□□□□□ -0.51
CHRNA1-202ENST00000348749 STX10O60499 249 aa11.85□□□□□ -0.51
CHRNA1-202ENST00000348749 CYP21A2P08686 494 aa11.85□□□□□ -0.51
CHRNA1-202ENST00000348749 TOP1P11387 765 aaKnown RBP11.85□□□□□ -0.51
CHRNA1-202ENST00000348749 LMOD1P29536 600 aaPredicted RBP11.85□□□□□ -0.51
CHRNA1-202ENST00000348749 RFX5P48382 616 aaPredicted RBP11.85□□□□□ -0.51
CHRNA1-202ENST00000348749 CHMP4BP1P59074 171 aa11.85□□□□□ -0.51
CHRNA1-202ENST00000348749 TUBB2AQ13885 445 aa11.85□□□□□ -0.51
CHRNA1-202ENST00000348749 C14orf37Q86TY3 774 aa11.85□□□□□ -0.51
CHRNA1-202ENST00000348749 KBTBD3Q8NAB2 608 aa11.85□□□□□ -0.51
CHRNA1-202ENST00000348749 TUBB2BQ9BVA1 445 aa11.85□□□□□ -0.51
CHRNA1-202ENST00000348749 FAM107BQ9H098 131 aa11.85□□□□□ -0.51
CHRNA1-202ENST00000348749 ANKZF1Q9H8Y5 726 aa11.85□□□□□ -0.51
CHRNA1-202ENST00000348749 AKAP2Q9Y2D5 859 aa11.85□□□□□ -0.51
CHRNA1-202ENST00000348749 FAN1Q9Y2M0 1017 aa11.85□□□□□ -0.51
CHRNA1-202ENST00000348749 SETD1BQ9UPS6 1966 aaKnown RBP11.84□□□□□ -0.51
CHRNA1-202ENST00000348749 C5P01031 1676 aa11.84□□□□□ -0.51
CHRNA1-202ENST00000348749 MST1RQ04912 1400 aa11.84□□□□□ -0.51
CHRNA1-202ENST00000348749 A0A1B0GVL5 298 aa11.84□□□□□ -0.51
CHRNA1-202ENST00000348749 CUTAO60888 179 aa11.84□□□□□ -0.51
CHRNA1-202ENST00000348749 PPFIA4O75335 1185 aa11.84□□□□□ -0.51
CHRNA1-202ENST00000348749 EXOSC10Q01780 885 aaKnown RBP11.84□□□□□ -0.51
CHRNA1-202ENST00000348749 TBX2Q13207 712 aaPredicted RBP11.84□□□□□ -0.51
CHRNA1-202ENST00000348749 CEP112Q8N8E3 955 aa11.84□□□□□ -0.51
CHRNA1-202ENST00000348749 DPF2Q92785 391 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms