RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 KIF13BQ9NQT8 1826 aa6.33□□□□□ -1.4
VCAM1-202ENST00000347652 NRXN2Q9P2S2 1712 aa6.32□□□□□ -1.4
VCAM1-202ENST00000347652 NEURL1BA8MQ27 555 aa6.32□□□□□ -1.4
VCAM1-202ENST00000347652 ZBTB7BO15156 539 aaPredicted RBP6.32□□□□□ -1.4
VCAM1-202ENST00000347652 YBX3P16989 372 aaKnown RBP eCLIP6.32□□□□□ -1.4
VCAM1-202ENST00000347652 NDUFV2P19404 249 aa6.32□□□□□ -1.4
VCAM1-202ENST00000347652 AMPD3Q01432 767 aa6.32□□□□□ -1.4
VCAM1-202ENST00000347652 NEXNQ0ZGT2 675 aa6.32□□□□□ -1.4
VCAM1-202ENST00000347652 CWF19L2Q2TBE0 894 aaKnown RBP6.32□□□□□ -1.4
VCAM1-202ENST00000347652 EXOC6Q8TAG9 804 aa6.32□□□□□ -1.4
VCAM1-202ENST00000347652 MPHOSPH6Q99547 160 aaKnown RBP6.32□□□□□ -1.4
VCAM1-202ENST00000347652 ATP5J2-PTCD1G3V325 749 aa6.32□□□□□ -1.4
VCAM1-202ENST00000347652 SCAMP3O14828 347 aaKnown RBP6.32□□□□□ -1.4
VCAM1-202ENST00000347652 PTMAP06454 111 aaKnown RBP6.32□□□□□ -1.4
VCAM1-202ENST00000347652 RTL5Q5HYW3 569 aaPredicted RBP6.32□□□□□ -1.4
VCAM1-202ENST00000347652 PRR5LQ6MZQ0 368 aa6.32□□□□□ -1.4
VCAM1-202ENST00000347652 SLC51AQ86UW1 340 aa6.32□□□□□ -1.4
VCAM1-202ENST00000347652 NUTM1Q86Y26 1132 aa6.32□□□□□ -1.4
VCAM1-202ENST00000347652 SYNE4Q8N205 404 aa6.32□□□□□ -1.4
VCAM1-202ENST00000347652 EPS8L1Q8TE68 723 aa6.32□□□□□ -1.4
VCAM1-202ENST00000347652 DDX19BQ9UMR2 479 aa6.32□□□□□ -1.4
VCAM1-202ENST00000347652 ZNF652Q9Y2D9 606 aa6.32□□□□□ -1.4
VCAM1-202ENST00000347652 ANKRD36CQ5JPF3 1778 aa6.32□□□□□ -1.4
VCAM1-202ENST00000347652 EIF3JO75822 258 aaKnown RBP6.31□□□□□ -1.4
VCAM1-202ENST00000347652 ABL1P00519 1130 aa6.31□□□□□ -1.4
VCAM1-202ENST00000347652 DPEP1P16444 411 aa6.31□□□□□ -1.4
VCAM1-202ENST00000347652 KCNA3P22001 575 aa6.31□□□□□ -1.4
VCAM1-202ENST00000347652 DSG2Q14126 1118 aa6.31□□□□□ -1.4
VCAM1-202ENST00000347652 CRTC2Q53ET0 693 aaPredicted RBP6.31□□□□□ -1.4
VCAM1-202ENST00000347652 CCDC191Q8NCU4 936 aa6.31□□□□□ -1.4
VCAM1-202ENST00000347652 SETDB2Q96T68 719 aa6.31□□□□□ -1.4
VCAM1-202ENST00000347652 USP44Q9H0E7 712 aa6.31□□□□□ -1.4
VCAM1-202ENST00000347652 UTYO14607 1347 aa6.31□□□□□ -1.4
VCAM1-202ENST00000347652 USP5P45974 858 aa6.31□□□□□ -1.4
VCAM1-202ENST00000347652 GCKRQ14397 625 aa6.31□□□□□ -1.4
VCAM1-202ENST00000347652 SUSD4Q5VX71 490 aa6.31□□□□□ -1.4
VCAM1-202ENST00000347652 NLRP10Q86W26 655 aa6.31□□□□□ -1.4
VCAM1-202ENST00000347652 IER2Q9BTL4 223 aa6.31□□□□□ -1.4
VCAM1-202ENST00000347652 CWC25Q9NXE8 425 aaPredicted RBP6.31□□□□□ -1.4
VCAM1-202ENST00000347652 FBXO9Q9UK97 447 aaPredicted RBP6.31□□□□□ -1.4
VCAM1-202ENST00000347652 CD2APQ9Y5K6 639 aa6.31□□□□□ -1.4
VCAM1-202ENST00000347652 COL11A2P13942 1736 aaPredicted RBP6.31□□□□□ -1.4
VCAM1-202ENST00000347652 TNRC6CQ9HCJ0 1690 aaKnown RBP6.31□□□□□ -1.4
VCAM1-202ENST00000347652 ABCC12Q96J65 1359 aa6.31□□□□□ -1.4
VCAM1-202ENST00000347652 H3BRB1 525 aa6.31□□□□□ -1.4
VCAM1-202ENST00000347652 DEKP35659 375 aaKnown RBP6.31□□□□□ -1.4
VCAM1-202ENST00000347652 ERICH6BQ5W0A0 696 aa6.31□□□□□ -1.4
VCAM1-202ENST00000347652 JARID2Q92833 1246 aaPredicted RBP6.31□□□□□ -1.4
VCAM1-202ENST00000347652 IL17RAQ96F46 866 aa6.31□□□□□ -1.4
VCAM1-202ENST00000347652 TUT1Q9H6E5 874 aaKnown RBP6.31□□□□□ -1.4
VCAM1-202ENST00000347652 ZBTB40Q9NUA8 1239 aa6.31□□□□□ -1.4
VCAM1-202ENST00000347652 ZBTB12Q9Y330 459 aaPredicted RBP6.31□□□□□ -1.4
VCAM1-202ENST00000347652 BRCA1P38398 1863 aaKnown RBP6.3□□□□□ -1.4
VCAM1-202ENST00000347652 H7C1W4 665 aa6.3□□□□□ -1.4
VCAM1-202ENST00000347652 MAPK1P28482 360 aa6.3□□□□□ -1.4
VCAM1-202ENST00000347652 CASP7P55210 303 aa6.3□□□□□ -1.4
VCAM1-202ENST00000347652 PARP10Q53GL7 1025 aa6.3□□□□□ -1.4
VCAM1-202ENST00000347652 C3orf67Q6ZVT6 689 aa6.3□□□□□ -1.4
VCAM1-202ENST00000347652 NBPF5PQ86XG9 351 aaPredicted RBP6.3□□□□□ -1.4
VCAM1-202ENST00000347652 ZNF710Q8N1W2 664 aa6.3□□□□□ -1.4
VCAM1-202ENST00000347652 DEPDC4Q8N2C3 294 aa6.3□□□□□ -1.4
VCAM1-202ENST00000347652 TSC1Q92574 1164 aa6.3□□□□□ -1.4
VCAM1-202ENST00000347652 MEIS3Q99687 375 aa6.3□□□□□ -1.4
VCAM1-202ENST00000347652 TRIM34Q9BYJ4 488 aa6.3□□□□□ -1.4
VCAM1-202ENST00000347652 CFAP69A5D8W1 941 aa6.3□□□□□ -1.4
VCAM1-202ENST00000347652 GRM8O00222 908 aa6.3□□□□□ -1.4
VCAM1-202ENST00000347652 NBPF7P0C2Y1 421 aaPredicted RBP6.3□□□□□ -1.4
VCAM1-202ENST00000347652 ERFEQ4G0M1 354 aa6.3□□□□□ -1.4
VCAM1-202ENST00000347652 B4GALNT3Q6L9W6 998 aa6.3□□□□□ -1.4
VCAM1-202ENST00000347652 GET4Q7L5D6 327 aaPredicted RBP6.3□□□□□ -1.4
VCAM1-202ENST00000347652 CREBRFQ8IUR6 639 aa6.3□□□□□ -1.4
VCAM1-202ENST00000347652 CNBD1Q8NA66 436 aa6.3□□□□□ -1.4
VCAM1-202ENST00000347652 ZNF512BQ96KM6 892 aaPredicted RBP6.3□□□□□ -1.4
VCAM1-202ENST00000347652 KANSL2Q9H9L4 492 aa6.3□□□□□ -1.4
VCAM1-202ENST00000347652 SPC25Q9HBM1 224 aa6.3□□□□□ -1.4
VCAM1-202ENST00000347652 C9orf78Q9NZ63 289 aaPredicted RBP6.3□□□□□ -1.4
VCAM1-202ENST00000347652 PCDHB15Q9Y5E8 787 aa6.3□□□□□ -1.4
VCAM1-202ENST00000347652 PCDHGB7Q9Y5F8 929 aa6.3□□□□□ -1.4
VCAM1-202ENST00000347652 CACNA1SQ13698 1873 aa6.29□□□□□ -1.4
VCAM1-202ENST00000347652 NPHP1O15259 732 aa6.29□□□□□ -1.4
VCAM1-202ENST00000347652 LGR5O75473 907 aa6.29□□□□□ -1.4
VCAM1-202ENST00000347652 NTSR2O95665 410 aa6.29□□□□□ -1.4
VCAM1-202ENST00000347652 PCCAP05165 728 aaPredicted RBP6.29□□□□□ -1.4
VCAM1-202ENST00000347652 GNAI3P08754 354 aa6.29□□□□□ -1.4
VCAM1-202ENST00000347652 FANCCQ00597 558 aa6.29□□□□□ -1.4
VCAM1-202ENST00000347652 ODR4Q5SWX8 454 aa6.29□□□□□ -1.4
VCAM1-202ENST00000347652 WDR78Q5VTH9 848 aa6.29□□□□□ -1.4
VCAM1-202ENST00000347652 ZBTB38Q8NAP3 1195 aaPredicted RBP6.29□□□□□ -1.4
VCAM1-202ENST00000347652 TMEM87AQ8NBN3 555 aa6.29□□□□□ -1.4
VCAM1-202ENST00000347652 OSBPL2Q9H1P3 480 aa6.29□□□□□ -1.4
VCAM1-202ENST00000347652 SFMBT1Q9UHJ3 866 aa6.29□□□□□ -1.4
VCAM1-202ENST00000347652 SPDYE16A6NNV3 312 aaPredicted RBP6.29□□□□□ -1.4
VCAM1-202ENST00000347652 TNFRSF10BO14763 440 aa6.29□□□□□ -1.4
VCAM1-202ENST00000347652 STK10O94804 968 aaKnown RBP6.29□□□□□ -1.4
VCAM1-202ENST00000347652 GPR162Q16538 588 aa6.29□□□□□ -1.4
VCAM1-202ENST00000347652 PPP1R42Q7Z4L9 355 aa6.29□□□□□ -1.4
VCAM1-202ENST00000347652 UTP14AQ9BVJ6 771 aaKnown RBP6.29□□□□□ -1.4
VCAM1-202ENST00000347652 TRMT112Q9UI30 125 aaKnown RBP6.29□□□□□ -1.4
VCAM1-202ENST00000347652 COMMD10Q9Y6G5 202 aa6.29□□□□□ -1.4
VCAM1-202ENST00000347652 COL4A1P02462 1669 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms