RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 TSGA10IPQ3SY00 556 aa20.2■□□□□ 0.82
SMARCC2-202ENST00000347471 IL17RAQ96F46 866 aa20.2■□□□□ 0.82
SMARCC2-202ENST00000347471 MTMR7Q9Y216 660 aa20.2■□□□□ 0.82
SMARCC2-202ENST00000347471 NASPP49321 788 aaPredicted RBP20.19■□□□□ 0.82
SMARCC2-202ENST00000347471 KRT85P78386 507 aa20.19■□□□□ 0.82
SMARCC2-202ENST00000347471 UBE3CQ15386 1083 aa20.19■□□□□ 0.82
SMARCC2-202ENST00000347471 STRBPQ96SI9 672 aaKnown RBP20.19■□□□□ 0.82
SMARCC2-202ENST00000347471 NACAP1Q9BZK3 213 aa20.19■□□□□ 0.82
SMARCC2-202ENST00000347471 BSDC1Q9NW68 430 aaPredicted RBP20.19■□□□□ 0.82
SMARCC2-202ENST00000347471 IFNL3Q8IZI9 196 aa20.19■□□□□ 0.82
SMARCC2-202ENST00000347471 NUP133Q8WUM0 1156 aa20.19■□□□□ 0.82
SMARCC2-202ENST00000347471 ZNF219Q9P2Y4 722 aaPredicted RBP20.19■□□□□ 0.82
SMARCC2-202ENST00000347471 RFX7Q2KHR2 1363 aa20.19■□□□□ 0.82
SMARCC2-202ENST00000347471 CYP2D7A0A087X1C5 515 aa20.19■□□□□ 0.82
SMARCC2-202ENST00000347471 CAMK4Q16566 473 aa20.19■□□□□ 0.82
SMARCC2-202ENST00000347471 MSL1Q68DK7 614 aa20.19■□□□□ 0.82
SMARCC2-202ENST00000347471 TXNRD3Q86VQ6 643 aa20.19■□□□□ 0.82
SMARCC2-202ENST00000347471 SMIM22K7EJ46 135 aa20.18■□□□□ 0.82
SMARCC2-202ENST00000347471 PDIA3P30101 505 aaKnown RBP20.18■□□□□ 0.82
SMARCC2-202ENST00000347471 NAA16Q6N069 864 aaPredicted RBP20.18■□□□□ 0.82
SMARCC2-202ENST00000347471 BICD2Q8TD16 824 aa20.18■□□□□ 0.82
SMARCC2-202ENST00000347471 TUBGCP6Q96RT7 1819 aa20.18■□□□□ 0.82
SMARCC2-202ENST00000347471 IFIT3O14879 490 aaKnown RBP20.18■□□□□ 0.82
SMARCC2-202ENST00000347471 CLEC17AQ6ZS10 378 aa20.18■□□□□ 0.82
SMARCC2-202ENST00000347471 MPNDQ8N594 471 aa20.18■□□□□ 0.82
SMARCC2-202ENST00000347471 NKX2-3Q8TAU0 364 aa20.18■□□□□ 0.82
SMARCC2-202ENST00000347471 HIBADHP31937 336 aaKnown RBP20.17■□□□□ 0.82
SMARCC2-202ENST00000347471 SF3B3Q15393 1217 aaKnown RBP20.17■□□□□ 0.82
SMARCC2-202ENST00000347471 TRIM44Q96DX7 344 aaPredicted RBP20.17■□□□□ 0.82
SMARCC2-202ENST00000347471 FAM84BQ96KN1 310 aaPredicted RBP20.17■□□□□ 0.82
SMARCC2-202ENST00000347471 POLR3DP05423 398 aaPredicted RBP20.17■□□□□ 0.82
SMARCC2-202ENST00000347471 TMEM67Q5HYA8 995 aa20.17■□□□□ 0.82
SMARCC2-202ENST00000347471 SYAP1Q96A49 352 aaPredicted RBP20.17■□□□□ 0.82
SMARCC2-202ENST00000347471 SPATA32Q96LK8 384 aa20.17■□□□□ 0.82
SMARCC2-202ENST00000347471 FTOQ9C0B1 505 aaKnown RBP eCLIP20.17■□□□□ 0.82
SMARCC2-202ENST00000347471 AATFQ9NY61 560 aaKnown RBP eCLIP20.17■□□□□ 0.82
SMARCC2-202ENST00000347471 NUP98P52948 1817 aa20.17■□□□□ 0.82
SMARCC2-202ENST00000347471 GNL2Q13823 731 aaKnown RBP20.17■□□□□ 0.82
SMARCC2-202ENST00000347471 SENP2Q9HC62 589 aa20.17■□□□□ 0.82
SMARCC2-202ENST00000347471 MAGEB6P1A0A0J9YX57 407 aa20.16■□□□□ 0.82
SMARCC2-202ENST00000347471 APBA3O96018 575 aa20.16■□□□□ 0.82
SMARCC2-202ENST00000347471 RC3H1Q5TC82 1133 aaKnown RBP20.16■□□□□ 0.82
SMARCC2-202ENST00000347471 ADGRA1Q86SQ6 560 aa20.16■□□□□ 0.82
SMARCC2-202ENST00000347471 BCL11BQ9C0K0 894 aaPredicted RBP20.16■□□□□ 0.82
SMARCC2-202ENST00000347471 ADD1P35611 737 aaKnown RBP20.16■□□□□ 0.82
SMARCC2-202ENST00000347471 MFSD6Q6ZSS7 791 aa20.16■□□□□ 0.82
SMARCC2-202ENST00000347471 EPB41L4AQ9HCS5 686 aaPredicted RBP20.16■□□□□ 0.82
SMARCC2-202ENST00000347471 ORC3Q9UBD5 711 aaPredicted RBP20.16■□□□□ 0.82
SMARCC2-202ENST00000347471 PRDX5P30044 214 aa20.15■□□□□ 0.82
SMARCC2-202ENST00000347471 CYB5R4Q7L1T6 521 aa20.15■□□□□ 0.82
SMARCC2-202ENST00000347471 CMTR1Q8N1G2 835 aaKnown RBP20.15■□□□□ 0.82
SMARCC2-202ENST00000347471 NSUN7Q8NE18 718 aaKnown RBP20.15■□□□□ 0.82
SMARCC2-202ENST00000347471 C6orf229H3BNL8 230 aa20.15■□□□□ 0.82
SMARCC2-202ENST00000347471 EXOSC10Q01780 885 aaKnown RBP20.15■□□□□ 0.82
SMARCC2-202ENST00000347471 UBE4AQ14139 1066 aa20.15■□□□□ 0.82
SMARCC2-202ENST00000347471 RANBP6O60518 1105 aaKnown RBP20.15■□□□□ 0.82
SMARCC2-202ENST00000347471 DZIP1Q86YF9 867 aaKnown RBP20.15■□□□□ 0.82
SMARCC2-202ENST00000347471 PIBF1Q8WXW3 757 aa20.15■□□□□ 0.82
SMARCC2-202ENST00000347471 PHKBQ93100 1093 aa20.15■□□□□ 0.82
SMARCC2-202ENST00000347471 NEDD4P46934 1319 aa20.15■□□□□ 0.82
SMARCC2-202ENST00000347471 FSD2A1L4K1 749 aa20.14■□□□□ 0.82
SMARCC2-202ENST00000347471 PATL2C9JE40 543 aaKnown RBP20.14■□□□□ 0.82
SMARCC2-202ENST00000347471 PFKFB2O60825 505 aa20.14■□□□□ 0.82
SMARCC2-202ENST00000347471 SERPINB2P05120 415 aa20.14■□□□□ 0.82
SMARCC2-202ENST00000347471 GIMAP6Q6P9H5 292 aa20.14■□□□□ 0.82
SMARCC2-202ENST00000347471 KIF3AQ9Y496 699 aa20.14■□□□□ 0.82
SMARCC2-202ENST00000347471 ZNF804BA4D1E1 1349 aa20.14■□□□□ 0.81
SMARCC2-202ENST00000347471 ANTXR2P58335 489 aa20.14■□□□□ 0.81
SMARCC2-202ENST00000347471 CCDC69A6NI79 296 aa20.13■□□□□ 0.81
SMARCC2-202ENST00000347471 RIMBP2O15034 1052 aa20.13■□□□□ 0.81
SMARCC2-202ENST00000347471 METAP2P50579 478 aaKnown RBP eCLIP20.13■□□□□ 0.81
SMARCC2-202ENST00000347471 TTC6Q86TZ1 520 aa20.13■□□□□ 0.81
SMARCC2-202ENST00000347471 RBSNQ9H1K0 784 aa20.13■□□□□ 0.81
SMARCC2-202ENST00000347471 NRAPQ86VF7 1730 aa20.13■□□□□ 0.81
SMARCC2-202ENST00000347471 AIFM3Q96NN9 605 aa20.13■□□□□ 0.81
SMARCC2-202ENST00000347471 TXNRD1Q16881 649 aa20.12■□□□□ 0.81
SMARCC2-202ENST00000347471 SYNE3Q6ZMZ3 975 aa20.12■□□□□ 0.81
SMARCC2-202ENST00000347471 TCRBV5S4A2TA0A5A2 114 aa20.12■□□□□ 0.81
SMARCC2-202ENST00000347471 ERICH2A1L162 156 aa20.12■□□□□ 0.81
SMARCC2-202ENST00000347471 GSG1L2A8MUP6 293 aa20.12■□□□□ 0.81
SMARCC2-202ENST00000347471 ST5P78524 1137 aa20.12■□□□□ 0.81
SMARCC2-202ENST00000347471 CSPP1Q1MSJ5 1256 aa20.12■□□□□ 0.81
SMARCC2-202ENST00000347471 PRR5LQ6MZQ0 368 aa20.12■□□□□ 0.81
SMARCC2-202ENST00000347471 MB21D2Q8IYB1 491 aaPredicted RBP20.12■□□□□ 0.81
SMARCC2-202ENST00000347471 UFL1O94874 794 aa20.12■□□□□ 0.81
SMARCC2-202ENST00000347471 CTDNEP1O95476 244 aa20.12■□□□□ 0.81
SMARCC2-202ENST00000347471 C8orf76Q96K31 380 aa20.12■□□□□ 0.81
SMARCC2-202ENST00000347471 ANGEL1Q9UNK9 670 aaKnown RBP20.11■□□□□ 0.81
SMARCC2-202ENST00000347471 GOLGA8AA7E2F4 631 aa20.11■□□□□ 0.81
SMARCC2-202ENST00000347471 ATP2B1P20020 1258 aa20.11■□□□□ 0.81
SMARCC2-202ENST00000347471 UBE2HP62256 183 aa20.11■□□□□ 0.81
SMARCC2-202ENST00000347471 ZNF512BQ96KM6 892 aaPredicted RBP20.11■□□□□ 0.81
SMARCC2-202ENST00000347471 F8W031 263 aaPredicted RBP20.11■□□□□ 0.81
SMARCC2-202ENST00000347471 SF3A1Q15459 793 aaKnown RBP20.11■□□□□ 0.81
SMARCC2-202ENST00000347471 CKAP2LQ8IYA6 745 aa20.11■□□□□ 0.81
SMARCC2-202ENST00000347471 UBAC1Q9BSL1 405 aa20.11■□□□□ 0.81
SMARCC2-202ENST00000347471 NBPF3Q9H094 633 aa20.11■□□□□ 0.81
SMARCC2-202ENST00000347471 ZSWIM5Q9P217 1185 aa20.11■□□□□ 0.81
SMARCC2-202ENST00000347471 SLC12A7Q9Y666 1083 aa20.11■□□□□ 0.81
SMARCC2-202ENST00000347471 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms