RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 PDS5AQ29RF7 1337 aaKnown RBP9.75□□□□□ -0.85
HMGCR-202ENST00000343975 MCMDC2Q4G0Z9 681 aa9.75□□□□□ -0.85
HMGCR-202ENST00000343975 GPC2Q8N158 579 aa9.75□□□□□ -0.85
HMGCR-202ENST00000343975 DCPSQ96C86 337 aaKnown RBP9.75□□□□□ -0.85
HMGCR-202ENST00000343975 HACL1Q9UJ83 578 aa9.75□□□□□ -0.85
HMGCR-202ENST00000343975 FAM205AQ6ZU69 1335 aa9.75□□□□□ -0.85
HMGCR-202ENST00000343975 PDE6AP16499 860 aa9.75□□□□□ -0.85
HMGCR-202ENST00000343975 UBE3CQ15386 1083 aa9.75□□□□□ -0.85
HMGCR-202ENST00000343975 SULF1Q8IWU6 871 aa9.75□□□□□ -0.85
HMGCR-202ENST00000343975 GMPSP49915 693 aaPredicted RBP9.74□□□□□ -0.85
HMGCR-202ENST00000343975 FKBP1AP62942 108 aaKnown RBP9.74□□□□□ -0.85
HMGCR-202ENST00000343975 MIGA1Q8NAN2 632 aa9.74□□□□□ -0.85
HMGCR-202ENST00000343975 HELLSQ9NRZ9 838 aa9.74□□□□□ -0.85
HMGCR-202ENST00000343975 CNOT7Q9UIV1 285 aaKnown RBP9.74□□□□□ -0.85
HMGCR-202ENST00000343975 RAD50Q92878 1312 aa9.74□□□□□ -0.85
HMGCR-202ENST00000343975 ZNF532Q9HCE3 1301 aa9.74□□□□□ -0.85
HMGCR-202ENST00000343975 YBX3P16989 372 aaKnown RBP eCLIP9.74□□□□□ -0.853e-7■■□□□ 12.8
HMGCR-202ENST00000343975 PDE4AP27815 886 aa9.74□□□□□ -0.85
HMGCR-202ENST00000343975 TTLL12Q14166 644 aaPredicted RBP9.74□□□□□ -0.85
HMGCR-202ENST00000343975 PI16Q6UXB8 463 aa9.74□□□□□ -0.85
HMGCR-202ENST00000343975 RALYLQ86SE5 291 aaKnown RBP9.74□□□□□ -0.85
HMGCR-202ENST00000343975 NDUFB9Q9Y6M9 179 aa9.74□□□□□ -0.85
HMGCR-202ENST00000343975 HDLBPQ00341 1268 aaKnown RBP9.74□□□□□ -0.85
HMGCR-202ENST00000343975 DPF2Q92785 391 aa9.74□□□□□ -0.85
HMGCR-202ENST00000343975 GPBP1L1Q9HC44 474 aaPredicted RBP9.74□□□□□ -0.85
HMGCR-202ENST00000343975 USP40Q9NVE5 1235 aa9.74□□□□□ -0.85
HMGCR-202ENST00000343975 SLC4A4Q9Y6R1 1079 aa9.74□□□□□ -0.85
HMGCR-202ENST00000343975 MBD4O95243 580 aa9.73□□□□□ -0.85
HMGCR-202ENST00000343975 PRDX5P30044 214 aa9.73□□□□□ -0.85
HMGCR-202ENST00000343975 CFAP100Q494V2 611 aa9.73□□□□□ -0.85
HMGCR-202ENST00000343975 PNMA8AQ86V59 439 aaPredicted RBP9.73□□□□□ -0.85
HMGCR-202ENST00000343975 MICALL2Q8IY33 904 aa9.73□□□□□ -0.85
HMGCR-202ENST00000343975 CYP2E1P05181 493 aaPredicted RBP9.73□□□□□ -0.85
HMGCR-202ENST00000343975 BTDP43251 543 aa9.73□□□□□ -0.85
HMGCR-202ENST00000343975 CRKP46108 304 aa9.73□□□□□ -0.85
HMGCR-202ENST00000343975 PICALMQ13492 652 aa9.73□□□□□ -0.85
HMGCR-202ENST00000343975 TTC6Q86TZ1 520 aa9.73□□□□□ -0.85
HMGCR-202ENST00000343975 EDC3Q96F86 508 aaKnown RBP9.73□□□□□ -0.85
HMGCR-202ENST00000343975 AATFQ9NY61 560 aaKnown RBP eCLIP9.73□□□□□ -0.85
HMGCR-202ENST00000343975 ISY1Q9ULR0 285 aaKnown RBP9.73□□□□□ -0.85
HMGCR-202ENST00000343975 CASZ1Q86V15 1759 aa9.73□□□□□ -0.85
HMGCR-202ENST00000343975 VEGFAP15692 232 aaPredicted RBP9.72□□□□□ -0.85
HMGCR-202ENST00000343975 MECOMQ03112 1051 aa9.72□□□□□ -0.85
HMGCR-202ENST00000343975 IMMTQ16891 758 aaKnown RBP9.72□□□□□ -0.85
HMGCR-202ENST00000343975 ZBTB12Q9Y330 459 aaPredicted RBP9.72□□□□□ -0.85
HMGCR-202ENST00000343975 KIF4BQ2VIQ3 1234 aa9.72□□□□□ -0.85
HMGCR-202ENST00000343975 PI4K2BQ8TCG2 481 aa9.72□□□□□ -0.85
HMGCR-202ENST00000343975 PIH1D3Q9NQM4 214 aaKnown RBP9.72□□□□□ -0.85
HMGCR-202ENST00000343975 SALL1Q9NSC2 1324 aa9.72□□□□□ -0.85
HMGCR-202ENST00000343975 MINDY4BA8MYZ0 360 aa9.72□□□□□ -0.85
HMGCR-202ENST00000343975 NMIQ13287 307 aaPredicted RBP9.72□□□□□ -0.85
HMGCR-202ENST00000343975 SCARF1Q14162 830 aa9.72□□□□□ -0.85
HMGCR-202ENST00000343975 TBC1D10BQ4KMP7 808 aaPredicted RBP9.72□□□□□ -0.85
HMGCR-202ENST00000343975 DACT2Q5SW24 774 aa9.72□□□□□ -0.85
HMGCR-202ENST00000343975 RNF41Q9H4P4 317 aaPredicted RBP9.72□□□□□ -0.85
HMGCR-202ENST00000343975 ANTXR1Q9H6X2 564 aa9.72□□□□□ -0.85
HMGCR-202ENST00000343975 ADARB2Q9NS39 739 aaKnown RBP9.72□□□□□ -0.85
HMGCR-202ENST00000343975 SERPINA10Q9UK55 444 aa9.72□□□□□ -0.85
HMGCR-202ENST00000343975 U3KPZ7 1027 aaPredicted RBP9.72□□□□□ -0.85
HMGCR-202ENST00000343975 DDNO94850 711 aaPredicted RBP9.71□□□□□ -0.85
HMGCR-202ENST00000343975 VIL1P09327 827 aaKnown RBP9.71□□□□□ -0.85
HMGCR-202ENST00000343975 ADD2P35612 726 aa9.71□□□□□ -0.85
HMGCR-202ENST00000343975 HHIPL2Q6UWX4 724 aa9.71□□□□□ -0.85
HMGCR-202ENST00000343975 EP400Q96L91 3159 aa9.71□□□□□ -0.85
HMGCR-202ENST00000343975 N4BP2Q86UW6 1770 aaPredicted RBP9.71□□□□□ -0.85
HMGCR-202ENST00000343975 CCDC171Q6TFL3 1326 aa9.71□□□□□ -0.85
HMGCR-202ENST00000343975 DIXDC1Q155Q3 683 aa9.71□□□□□ -0.85
HMGCR-202ENST00000343975 APOBEC3FQ8IUX4 373 aaKnown RBP9.71□□□□□ -0.85
HMGCR-202ENST00000343975 MROH7-TTC4A0A0A0MT08 1334 aa9.71□□□□□ -0.86
HMGCR-202ENST00000343975 TNRC6CQ9HCJ0 1690 aaKnown RBP9.71□□□□□ -0.86
HMGCR-202ENST00000343975 ERICH2A1L162 156 aa9.71□□□□□ -0.86
HMGCR-202ENST00000343975 GLTPD2A6NH11 291 aa9.71□□□□□ -0.86
HMGCR-202ENST00000343975 GPAA1O43292 621 aa9.71□□□□□ -0.86
HMGCR-202ENST00000343975 MKNK2Q9HBH9 465 aa9.71□□□□□ -0.86
HMGCR-202ENST00000343975 MCM9Q9NXL9 1143 aa9.71□□□□□ -0.86
HMGCR-202ENST00000343975 RFX7Q2KHR2 1363 aa9.71□□□□□ -0.86
HMGCR-202ENST00000343975 PDE4BQ07343 736 aa9.7□□□□□ -0.86
HMGCR-202ENST00000343975 SART3Q15020 963 aaKnown RBP9.7□□□□□ -0.86
HMGCR-202ENST00000343975 ARMT1Q9H993 441 aa9.7□□□□□ -0.86
HMGCR-202ENST00000343975 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.7□□□□□ -0.86
HMGCR-202ENST00000343975 LAMB2P55268 1798 aa9.7□□□□□ -0.86
HMGCR-202ENST00000343975 ZNF213O14771 459 aa9.7□□□□□ -0.86
HMGCR-202ENST00000343975 CHMLP26374 656 aa9.7□□□□□ -0.86
HMGCR-202ENST00000343975 DCAF15Q66K64 600 aa9.7□□□□□ -0.86
HMGCR-202ENST00000343975 MYOZ2Q9NPC6 264 aa9.7□□□□□ -0.86
HMGCR-202ENST00000343975 NAP1L2Q9ULW6 460 aaPredicted RBP9.7□□□□□ -0.86
HMGCR-202ENST00000343975 CLRN2A0PK11 232 aa9.7□□□□□ -0.86
HMGCR-202ENST00000343975 FZD9O00144 591 aa9.7□□□□□ -0.86
HMGCR-202ENST00000343975 EPHX2P34913 555 aa9.7□□□□□ -0.86
HMGCR-202ENST00000343975 KRT32Q14532 448 aa9.7□□□□□ -0.86
HMGCR-202ENST00000343975 SUPT20HL1Q3ZLR7 823 aa9.7□□□□□ -0.86
HMGCR-202ENST00000343975 SKAP1Q86WV1 359 aa9.7□□□□□ -0.86
HMGCR-202ENST00000343975 CABP5Q9NP86 173 aa9.7□□□□□ -0.86
HMGCR-202ENST00000343975 DDX60Q8IY21 1712 aaKnown RBP9.7□□□□□ -0.86
HMGCR-202ENST00000343975 WTIPA6NIX2 430 aaPredicted RBP9.69□□□□□ -0.86
HMGCR-202ENST00000343975 HSP90AA1P07900 732 aaKnown RBP9.69□□□□□ -0.86
HMGCR-202ENST00000343975 PSMA5P28066 241 aa9.69□□□□□ -0.86
HMGCR-202ENST00000343975 ZNF444Q8N0Y2 327 aaPredicted RBP9.69□□□□□ -0.86
HMGCR-202ENST00000343975 NSUN4Q96CB9 384 aaKnown RBP9.69□□□□□ -0.86
HMGCR-202ENST00000343975 ATP8A2Q9NTI2 1148 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms