RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 PTPN12Q05209 780 aaKnown RBP11.14□□□□□ -0.63
HOXA1-201ENST00000343060 RABL6Q3YEC7 729 aaPredicted RBP11.14□□□□□ -0.63
HOXA1-201ENST00000343060 NBPF6Q5VWK0 638 aa11.14□□□□□ -0.63
HOXA1-201ENST00000343060 NBPF4Q96M43 638 aa11.14□□□□□ -0.63
HOXA1-201ENST00000343060 ADAM21Q9UKJ8 722 aa11.14□□□□□ -0.63
HOXA1-201ENST00000343060 C5P01031 1676 aa11.14□□□□□ -0.63
HOXA1-201ENST00000343060 SLIT3O75094 1523 aa11.14□□□□□ -0.63
HOXA1-201ENST00000343060 STX10O60499 249 aa11.14□□□□□ -0.63
HOXA1-201ENST00000343060 ACTN2P35609 894 aa11.14□□□□□ -0.63
HOXA1-201ENST00000343060 USP5P45974 858 aa11.14□□□□□ -0.63
HOXA1-201ENST00000343060 NOP2P46087 812 aaKnown RBP11.14□□□□□ -0.63
HOXA1-201ENST00000343060 LONRF2Q1L5Z9 754 aa11.14□□□□□ -0.63
HOXA1-201ENST00000343060 ZMYM1Q5SVZ6 1142 aa11.14□□□□□ -0.63
HOXA1-201ENST00000343060 ANO1Q5XXA6 986 aa11.14□□□□□ -0.63
HOXA1-201ENST00000343060 ZNF530Q6P9A1 599 aaPredicted RBP11.14□□□□□ -0.63
HOXA1-201ENST00000343060 FMNL2Q96PY5 1086 aa11.14□□□□□ -0.63
HOXA1-201ENST00000343060 EPC1Q9H2F5 836 aa11.14□□□□□ -0.63
HOXA1-201ENST00000343060 PLEKHG2Q9H7P9 1386 aa11.14□□□□□ -0.63
HOXA1-201ENST00000343060 TMEM232C9JQI7 657 aa11.13□□□□□ -0.63
HOXA1-201ENST00000343060 LTKP29376 864 aa11.13□□□□□ -0.63
HOXA1-201ENST00000343060 TFCP2Q12800 502 aa11.13□□□□□ -0.63
HOXA1-201ENST00000343060 GCKRQ14397 625 aa11.13□□□□□ -0.63
HOXA1-201ENST00000343060 CFAP100Q494V2 611 aa11.13□□□□□ -0.63
HOXA1-201ENST00000343060 CTR9Q6PD62 1173 aa11.13□□□□□ -0.63
HOXA1-201ENST00000343060 CCDC34Q96HJ3 373 aa11.13□□□□□ -0.63
HOXA1-201ENST00000343060 C8orf76Q96K31 380 aa11.13□□□□□ -0.63
HOXA1-201ENST00000343060 LCMT1Q9UIC8 334 aa11.13□□□□□ -0.63
HOXA1-201ENST00000343060 RAB21Q9UL25 225 aa11.13□□□□□ -0.63
HOXA1-201ENST00000343060 NWD2Q9ULI1 1742 aa11.13□□□□□ -0.63
HOXA1-201ENST00000343060 SERPINC1P01008 464 aa11.13□□□□□ -0.63
HOXA1-201ENST00000343060 GNG11P61952 73 aa11.13□□□□□ -0.63
HOXA1-201ENST00000343060 KIF23Q02241 960 aaPredicted RBP11.13□□□□□ -0.63
HOXA1-201ENST00000343060 SLC39A14Q15043 492 aa11.13□□□□□ -0.63
HOXA1-201ENST00000343060 ELOA2Q8IYF1 753 aaPredicted RBP11.13□□□□□ -0.63
HOXA1-201ENST00000343060 OSCARQ8IYS5 282 aa11.13□□□□□ -0.63
HOXA1-201ENST00000343060 BAG1Q99933 345 aaPredicted RBP11.13□□□□□ -0.63
HOXA1-201ENST00000343060 DBNDD2Q9BQY9 259 aa11.13□□□□□ -0.63
HOXA1-201ENST00000343060 C19orf44Q9H6X5 657 aa11.13□□□□□ -0.63
HOXA1-201ENST00000343060 MAP3K15Q6ZN16 1313 aa11.13□□□□□ -0.63
HOXA1-201ENST00000343060 ARHGAP23Q9P227 1491 aa11.13□□□□□ -0.63
HOXA1-201ENST00000343060 TMEM94Q12767 1356 aa11.13□□□□□ -0.63
HOXA1-201ENST00000343060 WDHD1O75717 1129 aaPredicted RBP11.12□□□□□ -0.63
HOXA1-201ENST00000343060 IVLP07476 585 aa11.12□□□□□ -0.63
HOXA1-201ENST00000343060 AMOTQ4VCS5 1084 aa11.12□□□□□ -0.63
HOXA1-201ENST00000343060 PLEKHO1Q53GL0 409 aaPredicted RBP11.12□□□□□ -0.63
HOXA1-201ENST00000343060 TC2NQ8N9U0 490 aa11.12□□□□□ -0.63
HOXA1-201ENST00000343060 MSANTD4Q8NCY6 345 aa11.12□□□□□ -0.63
HOXA1-201ENST00000343060 ANKRD24Q8TF21 1146 aa11.12□□□□□ -0.63
HOXA1-201ENST00000343060 RSPH14Q9UHP6 348 aa11.12□□□□□ -0.63
HOXA1-201ENST00000343060 NDUFB9Q9Y6M9 179 aa11.12□□□□□ -0.63
HOXA1-201ENST00000343060 KIF28PB7ZC32 967 aa11.12□□□□□ -0.63
HOXA1-201ENST00000343060 POTEB2H3BUK9 544 aa11.12□□□□□ -0.63
HOXA1-201ENST00000343060 PPP6R2O75170 966 aa11.12□□□□□ -0.63
HOXA1-201ENST00000343060 HSPD1P10809 573 aaKnown RBP11.12□□□□□ -0.63
HOXA1-201ENST00000343060 DDX46Q7L014 1031 aaKnown RBP11.12□□□□□ -0.63
HOXA1-201ENST00000343060 DHX58Q96C10 678 aa11.12□□□□□ -0.63
HOXA1-201ENST00000343060 AMOTL2Q9Y2J4 779 aa11.12□□□□□ -0.63
HOXA1-201ENST00000343060 RRP15Q9Y3B9 282 aaKnown RBP11.12□□□□□ -0.63
HOXA1-201ENST00000343060 PRAMEF22A3QJZ6 481 aa11.11□□□□□ -0.63
HOXA1-201ENST00000343060 SYKP43405 635 aa11.11□□□□□ -0.63
HOXA1-201ENST00000343060 LMAN1P49257 510 aa11.11□□□□□ -0.63
HOXA1-201ENST00000343060 GOLGA8FQ08AF8 430 aa11.11□□□□□ -0.63
HOXA1-201ENST00000343060 GOLGA8DPQ0D2H9 430 aa11.11□□□□□ -0.63
HOXA1-201ENST00000343060 BEND6Q5SZJ8 279 aaPredicted RBP11.11□□□□□ -0.63
HOXA1-201ENST00000343060 OTUD7BQ6GQQ9 843 aa11.11□□□□□ -0.63
HOXA1-201ENST00000343060 MPRIPQ6WCQ1 1025 aa11.11□□□□□ -0.63
HOXA1-201ENST00000343060 METTL22Q9BUU2 404 aaPredicted RBP11.11□□□□□ -0.63
HOXA1-201ENST00000343060 YY1AP1Q9H869 796 aa11.11□□□□□ -0.63
HOXA1-201ENST00000343060 HPS5Q9UPZ3 1129 aa11.11□□□□□ -0.63
HOXA1-201ENST00000343060 AFDNP55196 1824 aaKnown RBP11.11□□□□□ -0.63
HOXA1-201ENST00000343060 TRIM66O15016 1216 aa11.11□□□□□ -0.63
HOXA1-201ENST00000343060 POLR3DP05423 398 aaPredicted RBP11.11□□□□□ -0.63
HOXA1-201ENST00000343060 ZNF18P17022 549 aa11.11□□□□□ -0.63
HOXA1-201ENST00000343060 TUBB4BP68371 445 aa11.11□□□□□ -0.63
HOXA1-201ENST00000343060 TOGARAM2Q6ZUX3 1019 aa11.11□□□□□ -0.63
HOXA1-201ENST00000343060 SRGAP1Q7Z6B7 1085 aa11.11□□□□□ -0.63
HOXA1-201ENST00000343060 MAST3O60307 1309 aa11.11□□□□□ -0.63
HOXA1-201ENST00000343060 A0A0G2JLW4 131 aa11.1□□□□□ -0.63
HOXA1-201ENST00000343060 DHX16O60231 1041 aaKnown RBP11.1□□□□□ -0.63
HOXA1-201ENST00000343060 CUTAO60888 179 aa11.1□□□□□ -0.63
HOXA1-201ENST00000343060 NEXNQ0ZGT2 675 aa11.1□□□□□ -0.63
HOXA1-201ENST00000343060 GNL2Q13823 731 aaKnown RBP11.1□□□□□ -0.63
HOXA1-201ENST00000343060 TUBB2AQ13885 445 aa11.1□□□□□ -0.63
HOXA1-201ENST00000343060 MLECQ14165 292 aa11.1□□□□□ -0.63
HOXA1-201ENST00000343060 PTPAQ15257 358 aa11.1□□□□□ -0.63
HOXA1-201ENST00000343060 RESP18Q5W5W9 173 aa11.1□□□□□ -0.63
HOXA1-201ENST00000343060 SHC4Q6S5L8 630 aa11.1□□□□□ -0.63
HOXA1-201ENST00000343060 SYNE3Q6ZMZ3 975 aa11.1□□□□□ -0.63
HOXA1-201ENST00000343060 ABTB2Q8N961 1025 aa11.1□□□□□ -0.63
HOXA1-201ENST00000343060 TUBB2BQ9BVA1 445 aa11.1□□□□□ -0.63
HOXA1-201ENST00000343060 ANKZF1Q9H8Y5 726 aa11.1□□□□□ -0.63
HOXA1-201ENST00000343060 FANCLQ9NW38 375 aa11.1□□□□□ -0.63
HOXA1-201ENST00000343060 TBX22Q9Y458 520 aa11.1□□□□□ -0.63
HOXA1-201ENST00000343060 WDR19Q8NEZ3 1342 aa11.1□□□□□ -0.63
HOXA1-201ENST00000343060 ECM29Q5VYK3 1845 aa11.1□□□□□ -0.63
HOXA1-201ENST00000343060 SPECC1LQ69YQ0 1117 aa11.1□□□□□ -0.63
HOXA1-201ENST00000343060 OLFM4Q6UX06 510 aa11.1□□□□□ -0.63
HOXA1-201ENST00000343060 RIC3Q7Z5B4 369 aa11.1□□□□□ -0.63
HOXA1-201ENST00000343060 METTL16Q86W50 562 aaKnown RBP11.1□□□□□ -0.63
HOXA1-201ENST00000343060 GPR108Q9NPR9 543 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms