RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 ATL3Q6DD88 541 aa27.93■■■□□ 2.06
NELFB-201ENST00000343053 TMC6Q7Z403 805 aa27.93■■■□□ 2.06
NELFB-201ENST00000343053 TBC1D10CQ8IV04 446 aa27.93■■■□□ 2.06
NELFB-201ENST00000343053 NAT10Q9H0A0 1025 aaKnown RBP27.93■■■□□ 2.06
NELFB-201ENST00000343053 MICU3Q86XE3 530 aa27.92■■■□□ 2.06
NELFB-201ENST00000343053 DNAJC10Q8IXB1 793 aa27.92■■■□□ 2.06
NELFB-201ENST00000343053 ISCA1Q9BUE6 129 aa27.92■■■□□ 2.06
NELFB-201ENST00000343053 ZNF202O95125 648 aa27.92■■■□□ 2.06
NELFB-201ENST00000343053 AKAP2Q9Y2D5 859 aa27.92■■■□□ 2.06
NELFB-201ENST00000343053 WDR17Q8IZU2 1322 aa27.91■■■□□ 2.06
NELFB-201ENST00000343053 MYO5AQ9Y4I1 1855 aaKnown RBP27.91■■■□□ 2.06
NELFB-201ENST00000343053 WDHD1O75717 1129 aaPredicted RBP27.91■■■□□ 2.06
NELFB-201ENST00000343053 SLC3A2P08195 630 aaKnown RBP27.91■■■□□ 2.06
NELFB-201ENST00000343053 PFKFB1P16118 471 aa27.91■■■□□ 2.06
NELFB-201ENST00000343053 ZSCAN20P17040 1043 aaPredicted RBP27.91■■■□□ 2.06
NELFB-201ENST00000343053 LMOD1P29536 600 aaPredicted RBP27.91■■■□□ 2.06
NELFB-201ENST00000343053 CYB5R4Q7L1T6 521 aa27.91■■■□□ 2.06
NELFB-201ENST00000343053 GREM2Q9H772 168 aa27.91■■■□□ 2.06
NELFB-201ENST00000343053 NPHP1O15259 732 aa27.91■■■□□ 2.06
NELFB-201ENST00000343053 KIF23Q02241 960 aaPredicted RBP27.91■■■□□ 2.06
NELFB-201ENST00000343053 SLC9C2Q5TAH2 1124 aa27.91■■■□□ 2.06
NELFB-201ENST00000343053 KCNG4Q8TDN1 519 aa27.91■■■□□ 2.06
NELFB-201ENST00000343053 ASAP1Q9ULH1 1129 aa27.91■■■□□ 2.06
NELFB-201ENST00000343053 ERVV-2B6SEH9 535 aa27.9■■■□□ 2.06
NELFB-201ENST00000343053 EVCP57679 992 aa27.9■■■□□ 2.06
NELFB-201ENST00000343053 ANO1Q5XXA6 986 aa27.9■■■□□ 2.06
NELFB-201ENST00000343053 LDHAL6AQ6ZMR3 332 aa27.9■■■□□ 2.06
NELFB-201ENST00000343053 STK11IPQ8N1F8 1099 aa27.9■■■□□ 2.06
NELFB-201ENST00000343053 ZNF215Q9UL58 517 aaPredicted RBP27.9■■■□□ 2.06
NELFB-201ENST00000343053 RBM6P78332 1123 aaKnown RBP27.89■■■□□ 2.06
NELFB-201ENST00000343053 HLFQ16534 295 aa27.89■■■□□ 2.06
NELFB-201ENST00000343053 POLR3EQ9NVU0 708 aa27.89■■■□□ 2.06
NELFB-201ENST00000343053 PAXBP1Q9Y5B6 917 aa27.89■■■□□ 2.06
NELFB-201ENST00000343053 B4E1Z4 1266 aa27.89■■■□□ 2.05
NELFB-201ENST00000343053 DHX16O60231 1041 aaKnown RBP27.89■■■□□ 2.05
NELFB-201ENST00000343053 ATG3Q9NT62 314 aa27.89■■■□□ 2.05
NELFB-201ENST00000343053 STRCP1A6NGW2 1772 aa27.89■■■□□ 2.05
NELFB-201ENST00000343053 A0A1W2PQ27 194 aa27.88■■■□□ 2.05
NELFB-201ENST00000343053 A0A1W2PQ64 194 aa27.88■■■□□ 2.05
NELFB-201ENST00000343053 A0A1W2PQD8 194 aa27.88■■■□□ 2.05
NELFB-201ENST00000343053 ZFYP08048 801 aaPredicted RBP27.88■■■□□ 2.05
NELFB-201ENST00000343053 UBR2Q8IWV8 1755 aa27.88■■■□□ 2.05
NELFB-201ENST00000343053 LRRFIP1Q32MZ4 808 aaKnown RBP27.88■■■□□ 2.05
NELFB-201ENST00000343053 CCAR2Q8N163 923 aaKnown RBP27.88■■■□□ 2.05
NELFB-201ENST00000343053 HELBQ8NG08 1087 aaPredicted RBP27.88■■■□□ 2.05
NELFB-201ENST00000343053 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.88■■■□□ 2.05
NELFB-201ENST00000343053 ALG1Q9BT22 464 aa27.88■■■□□ 2.05
NELFB-201ENST00000343053 PIH1D3Q9NQM4 214 aaKnown RBP27.88■■■□□ 2.05
NELFB-201ENST00000343053 CNNM1Q9NRU3 951 aa27.88■■■□□ 2.05
NELFB-201ENST00000343053 ATP1A3P13637 1013 aa27.87■■■□□ 2.05
NELFB-201ENST00000343053 ITGA6P23229 1130 aa27.87■■■□□ 2.05
NELFB-201ENST00000343053 GNL2Q13823 731 aaKnown RBP27.87■■■□□ 2.05
NELFB-201ENST00000343053 RIC1Q4ADV7 1423 aa27.87■■■□□ 2.05
NELFB-201ENST00000343053 IL2RBP14784 551 aa27.87■■■□□ 2.05
NELFB-201ENST00000343053 CDC27P30260 824 aa27.87■■■□□ 2.05
NELFB-201ENST00000343053 AXDND1Q5T1B0 1012 aaPredicted RBP27.87■■■□□ 2.05
NELFB-201ENST00000343053 KIF6Q6ZMV9 814 aa27.87■■■□□ 2.05
NELFB-201ENST00000343053 PARP4Q9UKK3 1724 aaKnown RBP27.87■■■□□ 2.05
NELFB-201ENST00000343053 SPEF2Q9C093 1822 aa27.86■■■□□ 2.05
NELFB-201ENST00000343053 YEATS4O95619 227 aa27.86■■■□□ 2.05
NELFB-201ENST00000343053 METAP2P50579 478 aaKnown RBP eCLIP27.86■■■□□ 2.05
NELFB-201ENST00000343053 TRDNQ13061 729 aa27.86■■■□□ 2.05
NELFB-201ENST00000343053 NYAP1Q6ZVC0 841 aa27.86■■■□□ 2.05
NELFB-201ENST00000343053 CLIC6Q96NY7 704 aa27.86■■■□□ 2.05
NELFB-201ENST00000343053 SNAP23O00161 211 aa27.86■■■□□ 2.05
NELFB-201ENST00000343053 HSP90AA4PQ58FG1 418 aa27.86■■■□□ 2.05
NELFB-201ENST00000343053 ARMCX5Q6P1M9 558 aa27.86■■■□□ 2.05
NELFB-201ENST00000343053 CADPS2Q86UW7 1296 aa27.86■■■□□ 2.05
NELFB-201ENST00000343053 VPS37DQ86XT2 251 aa27.86■■■□□ 2.05
NELFB-201ENST00000343053 TMOD3Q9NYL9 352 aa27.86■■■□□ 2.05
NELFB-201ENST00000343053 MYH7P12883 1935 aa27.85■■■□□ 2.05
NELFB-201ENST00000343053 NEMFO60524 1076 aa27.85■■■□□ 2.05
NELFB-201ENST00000343053 WWC3Q9ULE0 1092 aa27.85■■■□□ 2.05
NELFB-201ENST00000343053 BRAPQ7Z569 592 aa27.85■■■□□ 2.05
NELFB-201ENST00000343053 GOLGA8FQ08AF8 430 aa27.84■■■□□ 2.05
NELFB-201ENST00000343053 GOLGA8DPQ0D2H9 430 aa27.84■■■□□ 2.05
NELFB-201ENST00000343053 SPECC1Q5M775 1068 aa27.84■■■□□ 2.05
NELFB-201ENST00000343053 PHKA1P46020 1223 aa27.84■■■□□ 2.05
NELFB-201ENST00000343053 PNOCQ13519 176 aa27.84■■■□□ 2.05
NELFB-201ENST00000343053 NFXL1Q6ZNB6 911 aa27.84■■■□□ 2.05
NELFB-201ENST00000343053 ANGEL1Q9UNK9 670 aaKnown RBP27.84■■■□□ 2.05
NELFB-201ENST00000343053 CPDO75976 1380 aa27.84■■■□□ 2.05
NELFB-201ENST00000343053 ZNF532Q9HCE3 1301 aa27.83■■■□□ 2.05
NELFB-201ENST00000343053 PCCAP05165 728 aaPredicted RBP27.83■■■□□ 2.05
NELFB-201ENST00000343053 KRT40Q6A162 431 aa27.83■■■□□ 2.05
NELFB-201ENST00000343053 ADD2P35612 726 aa27.83■■■□□ 2.05
NELFB-201ENST00000343053 FBXL16Q8N461 479 aa27.83■■■□□ 2.05
NELFB-201ENST00000343053 ZBTB38Q8NAP3 1195 aaPredicted RBP27.83■■■□□ 2.05
NELFB-201ENST00000343053 NCAPHQ15003 741 aa27.82■■■□□ 2.04
NELFB-201ENST00000343053 E4F1Q66K89 784 aaPredicted RBP27.82■■■□□ 2.04
NELFB-201ENST00000343053 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.82■■■□□ 2.042e-6■■■□□ 15.5
NELFB-201ENST00000343053 C4AP0C0L4 1744 aa27.82■■■□□ 2.04
NELFB-201ENST00000343053 C4BP0C0L5 1744 aa27.82■■■□□ 2.04
NELFB-201ENST00000343053 SYKP43405 635 aa27.82■■■□□ 2.04
NELFB-201ENST00000343053 NLRP12P59046 1061 aa27.82■■■□□ 2.04
NELFB-201ENST00000343053 DMTNQ08495 405 aa27.82■■■□□ 2.04
NELFB-201ENST00000343053 ELF2Q15723 593 aa27.82■■■□□ 2.04
NELFB-201ENST00000343053 RIPOR2Q9Y4F9 1068 aa27.82■■■□□ 2.04
NELFB-201ENST00000343053 CCDC82Q8N4S0 544 aa27.81■■■□□ 2.04
NELFB-201ENST00000343053 AKAP11Q9UKA4 1901 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms