RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 TNRC6CQ9HCJ0 1690 aaKnown RBP17.3■□□□□ 0.36
PBX3-201ENST00000342287 ZNF804BA4D1E1 1349 aa17.3■□□□□ 0.36
PBX3-201ENST00000342287 HSPD1P10809 573 aaKnown RBP17.29■□□□□ 0.36
PBX3-201ENST00000342287 UBE3CQ15386 1083 aa17.29■□□□□ 0.36
PBX3-201ENST00000342287 TMX3Q96JJ7 454 aa17.29■□□□□ 0.36
PBX3-201ENST00000342287 TTC14Q96N46 770 aa17.29■□□□□ 0.36
PBX3-201ENST00000342287 RBSNQ9H1K0 784 aa17.29■□□□□ 0.36
PBX3-201ENST00000342287 WTIPA6NIX2 430 aaPredicted RBP17.29■□□□□ 0.36
PBX3-201ENST00000342287 GYG1P46976 350 aa17.29■□□□□ 0.36
PBX3-201ENST00000342287 KRT32Q14532 448 aa17.29■□□□□ 0.36
PBX3-201ENST00000342287 VPS37DQ86XT2 251 aa17.29■□□□□ 0.36
PBX3-201ENST00000342287 RBM17Q96I25 401 aaKnown RBP17.29■□□□□ 0.36
PBX3-201ENST00000342287 CCDC39Q9UFE4 941 aa17.29■□□□□ 0.36
PBX3-201ENST00000342287 TNS1Q9HBL0 1735 aaKnown RBP17.29■□□□□ 0.36
PBX3-201ENST00000342287 MAP3K12Q12852 859 aa17.28■□□□□ 0.36
PBX3-201ENST00000342287 VPS53Q5VIR6 699 aa17.28■□□□□ 0.36
PBX3-201ENST00000342287 RUFY3Q7L099 469 aa17.28■□□□□ 0.36
PBX3-201ENST00000342287 FAM84BQ96KN1 310 aaPredicted RBP17.28■□□□□ 0.36
PBX3-201ENST00000342287 PUS7LQ9H0K6 701 aaKnown RBP17.28■□□□□ 0.36
PBX3-201ENST00000342287 CCDC66A2RUB6 948 aa17.28■□□□□ 0.36
PBX3-201ENST00000342287 PTMSP20962 102 aa17.28■□□□□ 0.36
PBX3-201ENST00000342287 KIAA2012Q0VF49 1180 aa17.28■□□□□ 0.36
PBX3-201ENST00000342287 MMP14P50281 582 aa17.28■□□□□ 0.36
PBX3-201ENST00000342287 HMGN5P82970 282 aaKnown RBP17.28■□□□□ 0.36
PBX3-201ENST00000342287 PRIMPOLQ96LW4 560 aa17.28■□□□□ 0.36
PBX3-201ENST00000342287 KLRG2A4D1S0 409 aaPredicted RBP17.27■□□□□ 0.36
PBX3-201ENST00000342287 PTMAP06454 111 aaKnown RBP17.27■□□□□ 0.36
PBX3-201ENST00000342287 FBXO33Q7Z6M2 555 aa17.27■□□□□ 0.36
PBX3-201ENST00000342287 TRERF1Q96PN7 1200 aa17.27■□□□□ 0.36
PBX3-201ENST00000342287 CAMKK2Q96RR4 588 aa17.27■□□□□ 0.36
PBX3-201ENST00000342287 PDRG1Q9NUG6 133 aa17.27■□□□□ 0.36
PBX3-201ENST00000342287 RGPD3A6NKT7 1758 aaPredicted RBP17.27■□□□□ 0.36
PBX3-201ENST00000342287 RGPD4Q7Z3J3 1758 aa17.27■□□□□ 0.36
PBX3-201ENST00000342287 PNPLA7Q6ZV29 1317 aa17.27■□□□□ 0.36
PBX3-201ENST00000342287 RPAP1Q9BWH6 1393 aaPredicted RBP17.27■□□□□ 0.35
PBX3-201ENST00000342287 PDE6AP16499 860 aa17.27■□□□□ 0.35
PBX3-201ENST00000342287 CWC22Q9HCG8 908 aaKnown RBP17.27■□□□□ 0.35
PBX3-201ENST00000342287 GOLGA6L22H0YM25 854 aa17.26■□□□□ 0.35
PBX3-201ENST00000342287 CAPN2P17655 700 aa17.26■□□□□ 0.35
PBX3-201ENST00000342287 HOXA10P31260 410 aaPredicted RBP17.26■□□□□ 0.35
PBX3-201ENST00000342287 AK2P54819 239 aa17.26■□□□□ 0.35
PBX3-201ENST00000342287 EN1Q05925 392 aaPredicted RBP17.26■□□□□ 0.35
PBX3-201ENST00000342287 EZH2Q15910 746 aaKnown RBP17.26■□□□□ 0.35
PBX3-201ENST00000342287 ANKIB1Q9P2G1 1089 aa17.26■□□□□ 0.35
PBX3-201ENST00000342287 ZNF532Q9HCE3 1301 aa17.26■□□□□ 0.35
PBX3-201ENST00000342287 CLGNO14967 610 aa17.26■□□□□ 0.35
PBX3-201ENST00000342287 CYP21A2P08686 494 aa17.26■□□□□ 0.35
PBX3-201ENST00000342287 CPA1P15085 419 aa17.26■□□□□ 0.35
PBX3-201ENST00000342287 NOL8Q76FK4 1167 aaKnown RBP17.26■□□□□ 0.35
PBX3-201ENST00000342287 WWC3Q9ULE0 1092 aa17.26■□□□□ 0.35
PBX3-201ENST00000342287 DENND2AQ9ULE3 1009 aa17.26■□□□□ 0.35
PBX3-201ENST00000342287 LEMD3Q9Y2U8 911 aa17.26■□□□□ 0.35
PBX3-201ENST00000342287 TCRBV5S4A2TA0A5A2 114 aa17.25■□□□□ 0.35
PBX3-201ENST00000342287 SEMA3EO15041 775 aa17.25■□□□□ 0.35
PBX3-201ENST00000342287 GPAA1O43292 621 aa17.25■□□□□ 0.35
PBX3-201ENST00000342287 BBOX1O75936 387 aa17.25■□□□□ 0.35
PBX3-201ENST00000342287 CUL4AQ13619 759 aa17.25■□□□□ 0.35
PBX3-201ENST00000342287 RAB3GAP1Q15042 981 aa17.25■□□□□ 0.35
PBX3-201ENST00000342287 BLOC1S2Q6QNY1 142 aa17.25■□□□□ 0.35
PBX3-201ENST00000342287 BRIP1Q9BX63 1249 aa17.25■□□□□ 0.35
PBX3-201ENST00000342287 CTNNA3Q9UI47 895 aa17.25■□□□□ 0.35
PBX3-201ENST00000342287 IQSEC3Q9UPP2 1182 aaPredicted RBP17.25■□□□□ 0.35
PBX3-201ENST00000342287 A0A1B0GUL6 1792 aa17.25■□□□□ 0.35
PBX3-201ENST00000342287 HIBADHP31937 336 aaKnown RBP17.25■□□□□ 0.35
PBX3-201ENST00000342287 PSEN1P49768 467 aa17.25■□□□□ 0.35
PBX3-201ENST00000342287 CAVIN1Q6NZI2 390 aaKnown RBP17.25■□□□□ 0.35
PBX3-201ENST00000342287 CRAMP1Q96RY5 1269 aa17.25■□□□□ 0.35
PBX3-201ENST00000342287 LRP2BPQ9P2M1 347 aa17.25■□□□□ 0.35
PBX3-201ENST00000342287 LIMCH1Q9UPQ0 1083 aa17.25■□□□□ 0.35
PBX3-201ENST00000342287 TAF6LQ9Y6J9 622 aa17.25■□□□□ 0.35
PBX3-201ENST00000342287 KLHL40Q2TBA0 621 aa17.24■□□□□ 0.35
PBX3-201ENST00000342287 PARP3Q9Y6F1 533 aa17.24■□□□□ 0.35
PBX3-201ENST00000342287 HOMEZQ8IX15 550 aa17.24■□□□□ 0.35
PBX3-201ENST00000342287 MAGEB6Q8N7X4 407 aa17.24■□□□□ 0.35
PBX3-201ENST00000342287 INTS4Q96HW7 963 aaKnown RBP17.24■□□□□ 0.35
PBX3-201ENST00000342287 NEK1Q96PY6 1258 aa17.24■□□□□ 0.35
PBX3-201ENST00000342287 XDHP47989 1333 aa17.24■□□□□ 0.35
PBX3-201ENST00000342287 KLRK1P26718 216 aa17.23■□□□□ 0.35
PBX3-201ENST00000342287 GTF2F1P35269 517 aaKnown RBP eCLIP17.23■□□□□ 0.35
PBX3-201ENST00000342287 SLC15A2Q16348 729 aa17.23■□□□□ 0.35
PBX3-201ENST00000342287 MPNDQ8N594 471 aa17.23■□□□□ 0.35
PBX3-201ENST00000342287 ALDH8A1Q9H2A2 487 aaPredicted RBP17.23■□□□□ 0.35
PBX3-201ENST00000342287 MMP10P09238 476 aa17.23■□□□□ 0.35
PBX3-201ENST00000342287 RPS6KB1P23443 525 aa17.23■□□□□ 0.35
PBX3-201ENST00000342287 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.23■□□□□ 0.35
PBX3-201ENST00000342287 AIDAQ96BJ3 306 aa17.23■□□□□ 0.35
PBX3-201ENST00000342287 STK32BQ9NY57 414 aa17.23■□□□□ 0.35
PBX3-201ENST00000342287 MYH7P12883 1935 aa17.22■□□□□ 0.35
PBX3-201ENST00000342287 SF3B2Q13435 895 aaKnown RBP17.22■□□□□ 0.35
PBX3-201ENST00000342287 ANKRD1Q15327 319 aa17.22■□□□□ 0.35
PBX3-201ENST00000342287 ZGPATQ8N5A5 531 aaKnown RBP17.22■□□□□ 0.35
PBX3-201ENST00000342287 PDS5AQ29RF7 1337 aaKnown RBP17.22■□□□□ 0.35
PBX3-201ENST00000342287 ERICH4A6NGS2 130 aa17.22■□□□□ 0.35
PBX3-201ENST00000342287 FOXP2O15409 715 aa17.22■□□□□ 0.35
PBX3-201ENST00000342287 FGAP02671 866 aa17.22■□□□□ 0.35
PBX3-201ENST00000342287 HMGB1P09429 215 aaKnown RBP17.22■□□□□ 0.35
PBX3-201ENST00000342287 ZSCAN23Q3MJ62 389 aa17.22■□□□□ 0.35
PBX3-201ENST00000342287 ZSCAN31Q96LW9 406 aaPredicted RBP17.22■□□□□ 0.35
PBX3-201ENST00000342287 ABCF2Q9UG63 623 aa17.22■□□□□ 0.35
PBX3-201ENST00000342287 ZNF445P59923 1031 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms