RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 IGKV5-2P06315 115 aa13.71□□□□□ -0.22
CDH5-201ENST00000341529 SCRN1Q12765 414 aa13.71□□□□□ -0.22
CDH5-201ENST00000341529 TDRD12Q587J7 1177 aaKnown RBP13.71□□□□□ -0.22
CDH5-201ENST00000341529 CCDC178Q5BJE1 867 aa13.71□□□□□ -0.22
CDH5-201ENST00000341529 ANO1Q5XXA6 986 aa13.71□□□□□ -0.22
CDH5-201ENST00000341529 EEF2KMTQ96G04 330 aa13.71□□□□□ -0.22
CDH5-201ENST00000341529 MADDQ8WXG6 1647 aa13.7□□□□□ -0.22
CDH5-201ENST00000341529 KRT40Q6A162 431 aa13.7□□□□□ -0.22
CDH5-201ENST00000341529 SDR42E1Q8WUS8 393 aa13.7□□□□□ -0.22
CDH5-201ENST00000341529 GREM2Q9H772 168 aa13.7□□□□□ -0.22
CDH5-201ENST00000341529 BMP2KQ9NSY1 1161 aaPredicted RBP13.7□□□□□ -0.22
CDH5-201ENST00000341529 NLRP1Q9C000 1473 aa13.7□□□□□ -0.22
CDH5-201ENST00000341529 KDRP35968 1356 aa13.7□□□□□ -0.22
CDH5-201ENST00000341529 KIF24Q5T7B8 1368 aa13.7□□□□□ -0.22
CDH5-201ENST00000341529 FAM170AA1A519 330 aa13.7□□□□□ -0.22
CDH5-201ENST00000341529 EIF6P56537 245 aaKnown RBP13.7□□□□□ -0.22
CDH5-201ENST00000341529 CRNKL1Q9BZJ0 848 aaKnown RBP13.7□□□□□ -0.22
CDH5-201ENST00000341529 TM6SF1Q9BZW5 370 aa13.7□□□□□ -0.22
CDH5-201ENST00000341529 SAP30BPQ9UHR5 308 aaKnown RBP13.7□□□□□ -0.22
CDH5-201ENST00000341529 POLR2DO15514 142 aaKnown RBP13.7□□□□□ -0.22
CDH5-201ENST00000341529 ZNF202O95125 648 aa13.7□□□□□ -0.22
CDH5-201ENST00000341529 TCIRG1Q13488 830 aa13.7□□□□□ -0.22
CDH5-201ENST00000341529 TRIM47Q96LD4 638 aa13.7□□□□□ -0.22
CDH5-201ENST00000341529 ATP7BP35670 1465 aa13.7□□□□□ -0.22
CDH5-201ENST00000341529 TET3O43151 1660 aa13.7□□□□□ -0.22
CDH5-201ENST00000341529 TSPY3P0CV98 308 aa13.69□□□□□ -0.22
CDH5-201ENST00000341529 TSPY8P0CW00 308 aa13.69□□□□□ -0.22
CDH5-201ENST00000341529 CCT6AP40227 531 aaKnown RBP13.69□□□□□ -0.22
CDH5-201ENST00000341529 PHKA1P46020 1223 aa13.69□□□□□ -0.22
CDH5-201ENST00000341529 PTPN12Q05209 780 aaKnown RBP13.69□□□□□ -0.22
CDH5-201ENST00000341529 PTCH1Q13635 1447 aa13.69□□□□□ -0.22
CDH5-201ENST00000341529 CEP152O94986 1710 aa13.69□□□□□ -0.22
CDH5-201ENST00000341529 RIMBP2O15034 1052 aa13.69□□□□□ -0.22
CDH5-201ENST00000341529 AK7Q96M32 723 aa13.69□□□□□ -0.22
CDH5-201ENST00000341529 AIFM3Q96NN9 605 aa13.69□□□□□ -0.22
CDH5-201ENST00000341529 BCAMP50895 628 aa13.69□□□□□ -0.22
CDH5-201ENST00000341529 CUL4AQ13619 759 aa13.69□□□□□ -0.22
CDH5-201ENST00000341529 HS1BP3Q53T59 392 aa13.69□□□□□ -0.22
CDH5-201ENST00000341529 CACNA2D4Q7Z3S7 1137 aa13.69□□□□□ -0.22
CDH5-201ENST00000341529 ZNF622Q969S3 477 aaKnown RBP eCLIP13.69□□□□□ -0.22
CDH5-201ENST00000341529 CLIC6Q96NY7 704 aa13.69□□□□□ -0.22
CDH5-201ENST00000341529 ZNF75DP51815 510 aa13.68□□□□□ -0.22
CDH5-201ENST00000341529 AATFQ9NY61 560 aaKnown RBP eCLIP13.68□□□□□ -0.22
CDH5-201ENST00000341529 PYCARDQ9ULZ3 195 aa13.68□□□□□ -0.22
CDH5-201ENST00000341529 ERBB3P21860 1342 aa13.68□□□□□ -0.22
CDH5-201ENST00000341529 GTF2F1P35269 517 aaKnown RBP eCLIP13.68□□□□□ -0.22
CDH5-201ENST00000341529 GYG1P46976 350 aa13.68□□□□□ -0.22
CDH5-201ENST00000341529 ACBD3Q9H3P7 528 aa13.68□□□□□ -0.22
CDH5-201ENST00000341529 NEMFO60524 1076 aa13.68□□□□□ -0.22
CDH5-201ENST00000341529 TCERG1LQ5VWI1 586 aa13.68□□□□□ -0.22
CDH5-201ENST00000341529 TCP11L1Q9NUJ3 509 aa13.68□□□□□ -0.22
CDH5-201ENST00000341529 VPS54Q9P1Q0 977 aa13.68□□□□□ -0.22
CDH5-201ENST00000341529 CGNQ9P2M7 1197 aaKnown RBP13.68□□□□□ -0.22
CDH5-201ENST00000341529 ZBTB1Q9Y2K1 713 aa13.68□□□□□ -0.22
CDH5-201ENST00000341529 CYP27B1O15528 508 aa13.67□□□□□ -0.22
CDH5-201ENST00000341529 MYO1BO43795 1136 aa13.67□□□□□ -0.22
CDH5-201ENST00000341529 CAVIN2O95810 425 aa13.67□□□□□ -0.22
CDH5-201ENST00000341529 U2AF2P26368 475 aaKnown RBP eCLIP13.67□□□□□ -0.22
CDH5-201ENST00000341529 LONRF3Q496Y0 759 aa13.67□□□□□ -0.22
CDH5-201ENST00000341529 FAM47AQ5JRC9 791 aa13.67□□□□□ -0.22
CDH5-201ENST00000341529 SMIM5Q71RC9 77 aa13.67□□□□□ -0.22
CDH5-201ENST00000341529 PPP1R9BQ96SB3 815 aa13.67□□□□□ -0.22
CDH5-201ENST00000341529 COPRSQ9NQ92 184 aa13.67□□□□□ -0.22
CDH5-201ENST00000341529 ABCA6Q8N139 1617 aa13.67□□□□□ -0.22
CDH5-201ENST00000341529 RGS12O14924 1447 aa13.67□□□□□ -0.22
CDH5-201ENST00000341529 GNPATO15228 680 aa13.67□□□□□ -0.22
CDH5-201ENST00000341529 COBLO75128 1261 aa13.67□□□□□ -0.22
CDH5-201ENST00000341529 MCM6Q14566 821 aa13.67□□□□□ -0.22
CDH5-201ENST00000341529 HAUS7Q99871 368 aa13.67□□□□□ -0.22
CDH5-201ENST00000341529 CNNM2Q9H8M5 875 aa13.67□□□□□ -0.22
CDH5-201ENST00000341529 PUF60Q9UHX1 559 aaKnown RBP13.67□□□□□ -0.22
CDH5-201ENST00000341529 KCNH3Q9ULD8 1083 aa13.67□□□□□ -0.22
CDH5-201ENST00000341529 TULP4Q9NRJ4 1543 aa13.67□□□□□ -0.22
CDH5-201ENST00000341529 KIF5BP33176 963 aa13.67□□□□□ -0.22
CDH5-201ENST00000341529 STAT6P42226 847 aa13.67□□□□□ -0.22
CDH5-201ENST00000341529 LRRC7Q96NW7 1537 aa13.67□□□□□ -0.22
CDH5-201ENST00000341529 PNPLA6Q8IY17 1366 aa13.67□□□□□ -0.22
CDH5-201ENST00000341529 KIF2AO00139 706 aaPredicted RBP13.66□□□□□ -0.22
CDH5-201ENST00000341529 ARID5AQ03989 594 aa13.66□□□□□ -0.22
CDH5-201ENST00000341529 PNOCQ13519 176 aa13.66□□□□□ -0.22
CDH5-201ENST00000341529 KRI1Q8N9T8 703 aaKnown RBP13.66□□□□□ -0.22
CDH5-201ENST00000341529 OSBP2Q969R2 916 aa13.66□□□□□ -0.22
CDH5-201ENST00000341529 MMRN2Q9H8L6 949 aa13.66□□□□□ -0.22
CDH5-201ENST00000341529 UNC13BO14795 1591 aa13.66□□□□□ -0.22
CDH5-201ENST00000341529 PDE8AO60658 829 aa13.66□□□□□ -0.22
CDH5-201ENST00000341529 TRIM21P19474 475 aaKnown RBP13.66□□□□□ -0.22
CDH5-201ENST00000341529 PUM3Q15397 648 aaKnown RBP13.66□□□□□ -0.22
CDH5-201ENST00000341529 MYSM1Q5VVJ2 828 aa13.66□□□□□ -0.22
CDH5-201ENST00000341529 JAKMIP3Q5VZ66 844 aa13.66□□□□□ -0.22
CDH5-201ENST00000341529 INCENPQ9NQS7 918 aa13.66□□□□□ -0.22
CDH5-201ENST00000341529 SEC31BQ9NQW1 1179 aa13.66□□□□□ -0.22
CDH5-201ENST00000341529 CLIC4Q9Y696 253 aa13.66□□□□□ -0.22
CDH5-201ENST00000341529 CDK12Q9NYV4 1490 aaPredicted RBP13.66□□□□□ -0.22
CDH5-201ENST00000341529 GLI2P10070 1586 aa13.66□□□□□ -0.22
CDH5-201ENST00000341529 NPHP4O75161 1426 aaPredicted RBP13.66□□□□□ -0.22
CDH5-201ENST00000341529 BTBD18B2RXH4 712 aa13.66□□□□□ -0.22
CDH5-201ENST00000341529 BAG3O95817 575 aa13.66□□□□□ -0.22
CDH5-201ENST00000341529 CCDC150Q8NCX0 1101 aa13.66□□□□□ -0.22
CDH5-201ENST00000341529 VPS16Q9H269 839 aa13.66□□□□□ -0.22
CDH5-201ENST00000341529 PHACTR2O75167 634 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms