RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 IL17RAQ96F46 866 aa9.41□□□□□ -0.9
TMC1-202ENST00000340019 FHDC1Q9C0D6 1143 aaPredicted RBP9.41□□□□□ -0.9
TMC1-202ENST00000340019 RAI14Q9P0K7 980 aa9.41□□□□□ -0.9
TMC1-202ENST00000340019 FOXP2O15409 715 aa9.4□□□□□ -0.9
TMC1-202ENST00000340019 GRIK5Q16478 980 aa9.4□□□□□ -0.9
TMC1-202ENST00000340019 SPTY2D1Q68D10 685 aaPredicted RBP9.4□□□□□ -0.9
TMC1-202ENST00000340019 TBC1D22AQ8WUA7 517 aa9.4□□□□□ -0.9
TMC1-202ENST00000340019 DBNDD1Q9H9R9 158 aa9.4□□□□□ -0.9
TMC1-202ENST00000340019 GPAA1O43292 621 aa9.4□□□□□ -0.9
TMC1-202ENST00000340019 ECE2O60344 883 aa9.4□□□□□ -0.9
TMC1-202ENST00000340019 GTF2IP78347 998 aa9.4□□□□□ -0.9
TMC1-202ENST00000340019 NECTIN1Q15223 517 aa9.4□□□□□ -0.9
TMC1-202ENST00000340019 VPS53Q5VIR6 699 aa9.4□□□□□ -0.9
TMC1-202ENST00000340019 BCS1LQ9Y276 419 aa9.4□□□□□ -0.9
TMC1-202ENST00000340019 MYH2Q9UKX2 1941 aa9.4□□□□□ -0.91
TMC1-202ENST00000340019 NFKBIEO00221 500 aa9.4□□□□□ -0.91
TMC1-202ENST00000340019 PPIP5K2O43314 1243 aa9.4□□□□□ -0.91
TMC1-202ENST00000340019 HSPD1P10809 573 aaKnown RBP9.4□□□□□ -0.91
TMC1-202ENST00000340019 MFSD14BQ5SR56 506 aa9.4□□□□□ -0.91
TMC1-202ENST00000340019 KCNB2Q92953 911 aa9.4□□□□□ -0.91
TMC1-202ENST00000340019 DSCC1Q9BVC3 393 aa9.4□□□□□ -0.91
TMC1-202ENST00000340019 KCNQ5Q9NR82 932 aa9.4□□□□□ -0.91
TMC1-202ENST00000340019 LDHBP07195 334 aaKnown RBP9.39□□□□□ -0.91
TMC1-202ENST00000340019 CYP7A1P22680 504 aa9.39□□□□□ -0.91
TMC1-202ENST00000340019 TTLL5Q6EMB2 1281 aa9.39□□□□□ -0.91
TMC1-202ENST00000340019 NAA16Q6N069 864 aaPredicted RBP9.39□□□□□ -0.91
TMC1-202ENST00000340019 STRBPQ96SI9 672 aaKnown RBP9.39□□□□□ -0.91
TMC1-202ENST00000340019 ZNF277Q9NRM2 450 aaPredicted RBP9.39□□□□□ -0.91
TMC1-202ENST00000340019 PALD1Q9ULE6 856 aa9.39□□□□□ -0.91
TMC1-202ENST00000340019 SUGT1Q9Y2Z0 365 aa9.39□□□□□ -0.91
TMC1-202ENST00000340019 LTBP3Q9NS15 1303 aa9.39□□□□□ -0.91
TMC1-202ENST00000340019 YDJCA8MPS7 323 aa9.39□□□□□ -0.91
TMC1-202ENST00000340019 G3V3G9 751 aa9.39□□□□□ -0.91
TMC1-202ENST00000340019 ANAPC15P60006 121 aa9.39□□□□□ -0.91
TMC1-202ENST00000340019 FKBP1AP62942 108 aaKnown RBP9.39□□□□□ -0.91
TMC1-202ENST00000340019 DCAF8Q5TAQ9 597 aa9.39□□□□□ -0.91
TMC1-202ENST00000340019 STRIP1Q5VSL9 837 aa9.39□□□□□ -0.91
TMC1-202ENST00000340019 CERS5Q8N5B7 392 aa9.39□□□□□ -0.91
TMC1-202ENST00000340019 RIOK1Q9BRS2 568 aaKnown RBP9.39□□□□□ -0.91
TMC1-202ENST00000340019 SYT17Q9BSW7 474 aa9.39□□□□□ -0.91
TMC1-202ENST00000340019 TAOK3Q9H2K8 898 aa9.39□□□□□ -0.91
TMC1-202ENST00000340019 RBM8AQ9Y5S9 174 aaKnown RBP9.39□□□□□ -0.91
TMC1-202ENST00000340019 MCCP23508 829 aa9.38□□□□□ -0.91
TMC1-202ENST00000340019 MBD4O95243 580 aa9.38□□□□□ -0.91
TMC1-202ENST00000340019 IARSP41252 1262 aaKnown RBP9.38□□□□□ -0.91
TMC1-202ENST00000340019 DACT2Q5SW24 774 aa9.38□□□□□ -0.91
TMC1-202ENST00000340019 DZIP1Q86YF9 867 aaKnown RBP9.38□□□□□ -0.91
TMC1-202ENST00000340019 LCORLQ8N3X6 602 aa9.38□□□□□ -0.91
TMC1-202ENST00000340019 AIDAQ96BJ3 306 aa9.38□□□□□ -0.91
TMC1-202ENST00000340019 RASEFQ8IZ41 740 aa9.37□□□□□ -0.91
TMC1-202ENST00000340019 LARGE2Q8N3Y3 721 aa9.37□□□□□ -0.91
TMC1-202ENST00000340019 MIGA1Q8NAN2 632 aa9.37□□□□□ -0.91
TMC1-202ENST00000340019 ARMT1Q9H993 441 aa9.37□□□□□ -0.91
TMC1-202ENST00000340019 U3KPZ7 1027 aaPredicted RBP9.37□□□□□ -0.91
TMC1-202ENST00000340019 LAMA4Q16363 1823 aa9.37□□□□□ -0.91
TMC1-202ENST00000340019 USP17L3A6NCW0 530 aa9.37□□□□□ -0.91
TMC1-202ENST00000340019 USP17L4A6NCW7 530 aa9.37□□□□□ -0.91
TMC1-202ENST00000340019 ANP32AP39687 249 aaKnown RBP9.37□□□□□ -0.91
TMC1-202ENST00000340019 CREB3L3Q68CJ9 461 aa9.37□□□□□ -0.91
TMC1-202ENST00000340019 USP17L1Q7RTZ2 530 aa9.37□□□□□ -0.91
TMC1-202ENST00000340019 MXD3Q9BW11 206 aa9.37□□□□□ -0.91
TMC1-202ENST00000340019 SNX14Q9Y5W7 946 aa9.37□□□□□ -0.91
TMC1-202ENST00000340019 MAGEB6P1A0A0J9YX57 407 aa9.37□□□□□ -0.91
TMC1-202ENST00000340019 SOCS7O14512 581 aa9.37□□□□□ -0.91
TMC1-202ENST00000340019 SLC27A2O14975 620 aa9.37□□□□□ -0.91
TMC1-202ENST00000340019 GSTO1P78417 241 aa9.37□□□□□ -0.91
TMC1-202ENST00000340019 DIXDC1Q155Q3 683 aa9.37□□□□□ -0.91
TMC1-202ENST00000340019 FAM163AQ96GL9 167 aaPredicted RBP9.37□□□□□ -0.91
TMC1-202ENST00000340019 CDK5RAP2Q96SN8 1893 aa9.37□□□□□ -0.91
TMC1-202ENST00000340019 GAKO14976 1311 aa9.36□□□□□ -0.91
TMC1-202ENST00000340019 ZMYM6O95789 1325 aa9.36□□□□□ -0.91
TMC1-202ENST00000340019 PATL2C9JE40 543 aaKnown RBP9.36□□□□□ -0.91
TMC1-202ENST00000340019 FGAP02671 866 aa9.36□□□□□ -0.91
TMC1-202ENST00000340019 GNAT2P19087 354 aa9.36□□□□□ -0.91
TMC1-202ENST00000340019 PRELPP51888 382 aa9.36□□□□□ -0.91
TMC1-202ENST00000340019 TSGA10IPQ3SY00 556 aa9.36□□□□□ -0.91
TMC1-202ENST00000340019 ADAMTSL1Q8N6G6 1762 aa9.36□□□□□ -0.91
TMC1-202ENST00000340019 MROH7-TTC4A0A0A0MT08 1334 aa9.36□□□□□ -0.91
TMC1-202ENST00000340019 GSG1L2A8MUP6 293 aa9.36□□□□□ -0.91
TMC1-202ENST00000340019 PPP4CP60510 307 aa9.36□□□□□ -0.91
TMC1-202ENST00000340019 DYNLL1P63167 89 aaKnown RBP9.36□□□□□ -0.91
TMC1-202ENST00000340019 FBXW7Q969H0 707 aa9.36□□□□□ -0.91
TMC1-202ENST00000340019 ZNRF3Q9ULT6 936 aa9.36□□□□□ -0.91
TMC1-202ENST00000340019 RPAP1Q9BWH6 1393 aaPredicted RBP9.36□□□□□ -0.91
TMC1-202ENST00000340019 SBF1O95248 1867 aa9.36□□□□□ -0.91
TMC1-202ENST00000340019 DICER1Q9UPY3 1922 aaKnown RBP9.36□□□□□ -0.91
TMC1-202ENST00000340019 PRKAB2O43741 272 aa9.35□□□□□ -0.91
TMC1-202ENST00000340019 CYP21A2P08686 494 aa9.35□□□□□ -0.91
TMC1-202ENST00000340019 ALX1Q15699 326 aa9.35□□□□□ -0.91
TMC1-202ENST00000340019 EPB41L4AQ9HCS5 686 aaPredicted RBP9.35□□□□□ -0.91
TMC1-202ENST00000340019 AATFQ9NY61 560 aaKnown RBP eCLIP9.35□□□□□ -0.91
TMC1-202ENST00000340019 TAF6LQ9Y6J9 622 aa9.35□□□□□ -0.91
TMC1-202ENST00000340019 FOCADQ5VW36 1801 aa9.35□□□□□ -0.91
TMC1-202ENST00000340019 GPR75-ASB3A0A0A6YYF3 556 aa9.35□□□□□ -0.91
TMC1-202ENST00000340019 LDHCP07864 332 aa9.35□□□□□ -0.91
TMC1-202ENST00000340019 RASSF7Q02833 373 aa9.35□□□□□ -0.91
TMC1-202ENST00000340019 RABEP1Q15276 862 aa9.35□□□□□ -0.91
TMC1-202ENST00000340019 RNF20Q5VTR2 975 aa9.35□□□□□ -0.91
TMC1-202ENST00000340019 NIM1KQ8IY84 436 aa9.35□□□□□ -0.91
TMC1-202ENST00000340019 IFNL3Q8IZI9 196 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms