RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 PFKFB1P16118 471 aa12.74□□□□□ -0.37
SEMA4D-201ENST00000339861 RTN1Q16799 776 aa12.74□□□□□ -0.37
SEMA4D-201ENST00000339861 KIAA1468Q9P260 1216 aa12.74□□□□□ -0.37
SEMA4D-201ENST00000339861 ADAMTS13Q76LX8 1427 aa12.74□□□□□ -0.37
SEMA4D-201ENST00000339861 NRKQ7Z2Y5 1582 aa12.74□□□□□ -0.37
SEMA4D-201ENST00000339861 ERCC6LQ2NKX8 1250 aa12.74□□□□□ -0.37
SEMA4D-201ENST00000339861 SAMD1Q6SPF0 538 aaPredicted RBP12.74□□□□□ -0.37
SEMA4D-201ENST00000339861 CAGE1Q8TC20 777 aa12.74□□□□□ -0.37
SEMA4D-201ENST00000339861 PUS7LQ9H0K6 701 aaKnown RBP12.74□□□□□ -0.37
SEMA4D-201ENST00000339861 SIGLEC1Q9BZZ2 1709 aa12.74□□□□□ -0.37
SEMA4D-201ENST00000339861 KIF2AO00139 706 aaPredicted RBP12.74□□□□□ -0.37
SEMA4D-201ENST00000339861 TDRD7Q8NHU6 1098 aaKnown RBP12.74□□□□□ -0.37
SEMA4D-201ENST00000339861 DSCC1Q9BVC3 393 aa12.74□□□□□ -0.37
SEMA4D-201ENST00000339861 ANGEL1Q9UNK9 670 aaKnown RBP12.74□□□□□ -0.37
SEMA4D-201ENST00000339861 ELP1O95163 1332 aa12.73□□□□□ -0.37
SEMA4D-201ENST00000339861 ZSCAN12O43309 604 aa12.73□□□□□ -0.37
SEMA4D-201ENST00000339861 CYP7A1P22680 504 aa12.73□□□□□ -0.37
SEMA4D-201ENST00000339861 FAM193AP78312 1265 aa12.73□□□□□ -0.37
SEMA4D-201ENST00000339861 ST3GAL1Q11201 340 aa12.73□□□□□ -0.37
SEMA4D-201ENST00000339861 GPS2Q13227 327 aa12.73□□□□□ -0.37
SEMA4D-201ENST00000339861 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.73□□□□□ -0.37
SEMA4D-201ENST00000339861 KRT222Q8N1A0 295 aa12.73□□□□□ -0.37
SEMA4D-201ENST00000339861 CCDC191Q8NCU4 936 aa12.73□□□□□ -0.37
SEMA4D-201ENST00000339861 WASF1Q92558 559 aa12.73□□□□□ -0.37
SEMA4D-201ENST00000339861 CABP5Q9NP86 173 aa12.73□□□□□ -0.37
SEMA4D-201ENST00000339861 DACH1Q9UI36 760 aa12.73□□□□□ -0.37
SEMA4D-201ENST00000339861 PTPRUQ92729 1446 aa12.73□□□□□ -0.37
SEMA4D-201ENST00000339861 NEURL4Q96JN8 1562 aa12.73□□□□□ -0.37
SEMA4D-201ENST00000339861 ZNF532Q9HCE3 1301 aa12.73□□□□□ -0.37
SEMA4D-201ENST00000339861 POLR2DO15514 142 aaKnown RBP12.73□□□□□ -0.37
SEMA4D-201ENST00000339861 IL2RBP14784 551 aa12.73□□□□□ -0.37
SEMA4D-201ENST00000339861 MAPK8IP1Q9UQF2 711 aa12.73□□□□□ -0.37
SEMA4D-201ENST00000339861 DLC1Q96QB1 1528 aa12.73□□□□□ -0.37
SEMA4D-201ENST00000339861 COBLO75128 1261 aa12.73□□□□□ -0.37
SEMA4D-201ENST00000339861 HSP90B2PQ58FF3 399 aa12.72□□□□□ -0.37
SEMA4D-201ENST00000339861 CADPS2Q86UW7 1296 aa12.72□□□□□ -0.37
SEMA4D-201ENST00000339861 PLIN2Q99541 437 aa12.72□□□□□ -0.37
SEMA4D-201ENST00000339861 TTF1Q15361 905 aaPredicted RBP12.72□□□□□ -0.37
SEMA4D-201ENST00000339861 ZMYM1Q5SVZ6 1142 aa12.72□□□□□ -0.37
SEMA4D-201ENST00000339861 ADALQ6DHV7 355 aa12.72□□□□□ -0.37
SEMA4D-201ENST00000339861 GPIHBP1Q8IV16 184 aa12.72□□□□□ -0.37
SEMA4D-201ENST00000339861 GNL3LQ9NVN8 582 aaKnown RBP12.72□□□□□ -0.37
SEMA4D-201ENST00000339861 ATP1A3P13637 1013 aa12.72□□□□□ -0.37
SEMA4D-201ENST00000339861 MYL5Q02045 173 aa12.72□□□□□ -0.37
SEMA4D-201ENST00000339861 BRAPQ7Z569 592 aa12.72□□□□□ -0.37
SEMA4D-201ENST00000339861 SMAP1Q8IYB5 467 aaPredicted RBP12.72□□□□□ -0.37
SEMA4D-201ENST00000339861 KCNH3Q9ULD8 1083 aa12.72□□□□□ -0.37
SEMA4D-201ENST00000339861 DIS3L2Q8IYB7 885 aaKnown RBP12.71□□□□□ -0.37
SEMA4D-201ENST00000339861 CCDC24Q8N4L8 307 aa12.71□□□□□ -0.37
SEMA4D-201ENST00000339861 NUP88Q99567 741 aaPredicted RBP12.71□□□□□ -0.37
SEMA4D-201ENST00000339861 CARD6Q9BX69 1037 aa12.71□□□□□ -0.37
SEMA4D-201ENST00000339861 PUF60Q9UHX1 559 aaKnown RBP12.71□□□□□ -0.37
SEMA4D-201ENST00000339861 CARMIL3Q8ND23 1372 aa12.71□□□□□ -0.37
SEMA4D-201ENST00000339861 ADKP55263 362 aaKnown RBP12.71□□□□□ -0.37
SEMA4D-201ENST00000339861 NLRP5P59047 1200 aa12.71□□□□□ -0.37
SEMA4D-201ENST00000339861 FBXO18Q8NFZ0 1043 aa12.71□□□□□ -0.37
SEMA4D-201ENST00000339861 CCDC102AQ96A19 550 aa12.71□□□□□ -0.37
SEMA4D-201ENST00000339861 DNA2P51530 1060 aa12.71□□□□□ -0.38
SEMA4D-201ENST00000339861 ATP2B2Q01814 1243 aa12.71□□□□□ -0.38
SEMA4D-201ENST00000339861 DZIP3Q86Y13 1208 aaKnown RBP12.71□□□□□ -0.38
SEMA4D-201ENST00000339861 ZNF397Q8NF99 534 aaPredicted RBP12.71□□□□□ -0.38
SEMA4D-201ENST00000339861 NOL10Q9BSC4 688 aaKnown RBP12.71□□□□□ -0.38
SEMA4D-201ENST00000339861 GREM2Q9H772 168 aa12.71□□□□□ -0.38
SEMA4D-201ENST00000339861 RCOR1Q9UKL0 485 aa12.71□□□□□ -0.38
SEMA4D-201ENST00000339861 ASAP1Q9ULH1 1129 aa12.71□□□□□ -0.38
SEMA4D-201ENST00000339861 KIF20BQ96Q89 1820 aa12.71□□□□□ -0.38
SEMA4D-201ENST00000339861 CCDC66A2RUB6 948 aa12.71□□□□□ -0.38
SEMA4D-201ENST00000339861 TXLNAP40222 546 aa12.71□□□□□ -0.38
SEMA4D-201ENST00000339861 DESI2Q9BSY9 194 aa12.71□□□□□ -0.38
SEMA4D-201ENST00000339861 TRIM34Q9BYJ4 488 aa12.71□□□□□ -0.38
SEMA4D-201ENST00000339861 CCDC196A0A1B0GTZ2 297 aa12.7□□□□□ -0.38
SEMA4D-201ENST00000339861 BTBD18B2RXH4 712 aa12.7□□□□□ -0.38
SEMA4D-201ENST00000339861 MCM6Q14566 821 aa12.7□□□□□ -0.38
SEMA4D-201ENST00000339861 ZNF274Q96GC6 653 aaPredicted RBP12.7□□□□□ -0.38
SEMA4D-201ENST00000339861 CCT6AP40227 531 aaKnown RBP12.7□□□□□ -0.38
SEMA4D-201ENST00000339861 PHKA1P46020 1223 aa12.7□□□□□ -0.38
SEMA4D-201ENST00000339861 AMOTL1Q8IY63 956 aa12.7□□□□□ -0.38
SEMA4D-201ENST00000339861 FANCLQ9NW38 375 aa12.7□□□□□ -0.38
SEMA4D-201ENST00000339861 CLSTN1O94985 981 aa12.7□□□□□ -0.38
SEMA4D-201ENST00000339861 SCARF1Q14162 830 aa12.7□□□□□ -0.38
SEMA4D-201ENST00000339861 ZNF174Q15697 407 aa12.7□□□□□ -0.38
SEMA4D-201ENST00000339861 LONRF3Q496Y0 759 aa12.7□□□□□ -0.38
SEMA4D-201ENST00000339861 IQCA1Q86XH1 822 aa12.7□□□□□ -0.38
SEMA4D-201ENST00000339861 GRAMD1CQ8IYS0 662 aa12.7□□□□□ -0.38
SEMA4D-201ENST00000339861 NFE2L3Q9Y4A8 694 aa12.7□□□□□ -0.38
SEMA4D-201ENST00000339861 VIRMAQ69YN4 1812 aaKnown RBP12.7□□□□□ -0.38
SEMA4D-201ENST00000339861 N4BP3O15049 544 aa12.69□□□□□ -0.38
SEMA4D-201ENST00000339861 CTCFLQ8NI51 663 aaPredicted RBP12.69□□□□□ -0.38
SEMA4D-201ENST00000339861 NLRP12P59046 1061 aa12.69□□□□□ -0.38
SEMA4D-201ENST00000339861 KRI1Q8N9T8 703 aaKnown RBP12.69□□□□□ -0.38
SEMA4D-201ENST00000339861 VAT1LQ9HCJ6 419 aa12.69□□□□□ -0.38
SEMA4D-201ENST00000339861 OGFRQ9NZT2 677 aa12.69□□□□□ -0.38
SEMA4D-201ENST00000339861 MAGEC2Q9UBF1 373 aaPredicted RBP12.69□□□□□ -0.38
SEMA4D-201ENST00000339861 CEP131Q9UPN4 1083 aa12.69□□□□□ -0.38
SEMA4D-201ENST00000339861 KIF5CO60282 957 aa12.69□□□□□ -0.38
SEMA4D-201ENST00000339861 SSBP05455 408 aaKnown RBP eCLIP12.69□□□□□ -0.38
SEMA4D-201ENST00000339861 EIF5P55010 431 aaKnown RBP12.69□□□□□ -0.38
SEMA4D-201ENST00000339861 TCIRG1Q13488 830 aa12.69□□□□□ -0.38
SEMA4D-201ENST00000339861 ENOX2Q16206 610 aaKnown RBP12.69□□□□□ -0.38
SEMA4D-201ENST00000339861 CATIPQ7Z7H3 387 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms