RNA–Protein interactions for RNA: ENST00000339365.2

SEC24C-201, Transcript of SEC24 homolog C, COPII coat complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC24C, Length 4,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24C-201ENST00000339365 RTN1Q16799 776 aa12.57□□□□□ -0.4
SEC24C-201ENST00000339365 NBPF10Q6P3W6 841 aaKnown RBP12.57□□□□□ -0.4
SEC24C-201ENST00000339365 NBPF15Q8N660 670 aa12.57□□□□□ -0.4
SEC24C-201ENST00000339365 TGFBRAP1Q8WUH2 860 aa12.57□□□□□ -0.4
SEC24C-201ENST00000339365 AS3MTQ9HBK9 375 aa12.57□□□□□ -0.4
SEC24C-201ENST00000339365 PLEKHG2Q9H7P9 1386 aa12.56□□□□□ -0.4
SEC24C-201ENST00000339365 ZNF532Q9HCE3 1301 aa12.56□□□□□ -0.4
SEC24C-201ENST00000339365 CCDC148Q8NFR7 591 aa12.56□□□□□ -0.4
SEC24C-201ENST00000339365 NOC3LQ8WTT2 800 aaKnown RBP12.56□□□□□ -0.4
SEC24C-201ENST00000339365 ISCA1Q9BUE6 129 aa12.56□□□□□ -0.4
SEC24C-201ENST00000339365 CDHR2Q9BYE9 1310 aa12.56□□□□□ -0.4
SEC24C-201ENST00000339365 PLSCR1O15162 318 aa12.56□□□□□ -0.4
SEC24C-201ENST00000339365 TMEM266Q2M3C6 531 aa12.56□□□□□ -0.4
SEC24C-201ENST00000339365 OTUD7BQ6GQQ9 843 aa12.56□□□□□ -0.4
SEC24C-201ENST00000339365 PPP4R3AQ6IN85 833 aa12.56□□□□□ -0.4
SEC24C-201ENST00000339365 CCDC144CPQ8IYA2 1237 aa12.56□□□□□ -0.4
SEC24C-201ENST00000339365 BRF1Q92994 677 aa12.56□□□□□ -0.4
SEC24C-201ENST00000339365 SCLT1Q96NL6 688 aa12.56□□□□□ -0.4
SEC24C-201ENST00000339365 ITSN1Q15811 1721 aa12.56□□□□□ -0.4
SEC24C-201ENST00000339365 PODNQ7Z5L7 613 aa12.56□□□□□ -0.4
SEC24C-201ENST00000339365 ORC3Q9UBD5 711 aaPredicted RBP12.56□□□□□ -0.4
SEC24C-201ENST00000339365 COL5A2P05997 1499 aaPredicted RBP12.56□□□□□ -0.4
SEC24C-201ENST00000339365 ADAMTSL3P82987 1691 aa12.56□□□□□ -0.4
SEC24C-201ENST00000339365 RTL9Q8NET4 1388 aa12.56□□□□□ -0.4
SEC24C-201ENST00000339365 FIBPO43427 364 aa12.56□□□□□ -0.4
SEC24C-201ENST00000339365 OLFM4Q6UX06 510 aa12.56□□□□□ -0.4
SEC24C-201ENST00000339365 TCP10L2B9ZVM9 353 aa12.55□□□□□ -0.4
SEC24C-201ENST00000339365 PRC1O43663 620 aa12.55□□□□□ -0.4
SEC24C-201ENST00000339365 IRX3P78415 501 aaPredicted RBP12.55□□□□□ -0.4
SEC24C-201ENST00000339365 TRMT2AQ8IZ69 625 aaKnown RBP12.55□□□□□ -0.4
SEC24C-201ENST00000339365 EAF2Q96CJ1 260 aaPredicted RBP12.55□□□□□ -0.4
SEC24C-201ENST00000339365 MYO3BQ8WXR4 1341 aa12.55□□□□□ -0.4
SEC24C-201ENST00000339365 PABPC4Q13310 644 aaKnown RBP eCLIP12.55□□□□□ -0.41e-7■■■■■ 41.9
SEC24C-201ENST00000339365 SYNE4Q8N205 404 aa12.55□□□□□ -0.4
SEC24C-201ENST00000339365 ATP10DQ9P241 1426 aa12.55□□□□□ -0.4
SEC24C-201ENST00000339365 KIF1AQ12756 1690 aa12.55□□□□□ -0.4
SEC24C-201ENST00000339365 A0A0G2JLW4 131 aa12.55□□□□□ -0.4
SEC24C-201ENST00000339365 IQCA1LA6NCM1 817 aa12.55□□□□□ -0.4
SEC24C-201ENST00000339365 PHKA1P46020 1223 aa12.55□□□□□ -0.4
SEC24C-201ENST00000339365 ILDR1Q86SU0 546 aaPredicted RBP12.55□□□□□ -0.4
SEC24C-201ENST00000339365 SMCR8Q8TEV9 937 aaPredicted RBP12.55□□□□□ -0.4
SEC24C-201ENST00000339365 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.55□□□□□ -0.4
SEC24C-201ENST00000339365 CRAMP1Q96RY5 1269 aa12.54□□□□□ -0.4
SEC24C-201ENST00000339365 SLC26A6Q9BXS9 759 aa12.54□□□□□ -0.4
SEC24C-201ENST00000339365 ZNF521Q96K83 1311 aa12.54□□□□□ -0.4
SEC24C-201ENST00000339365 EPS15P42566 896 aa12.54□□□□□ -0.4
SEC24C-201ENST00000339365 PRR5LQ6MZQ0 368 aa12.54□□□□□ -0.4
SEC24C-201ENST00000339365 SMARCC2Q8TAQ2 1214 aa12.54□□□□□ -0.4
SEC24C-201ENST00000339365 USP17L8P0C7I0 530 aa12.54□□□□□ -0.4
SEC24C-201ENST00000339365 CHRNA5P30532 468 aa12.54□□□□□ -0.4
SEC24C-201ENST00000339365 ANAPC15P60006 121 aa12.54□□□□□ -0.4
SEC24C-201ENST00000339365 ARHGEF6Q15052 776 aa12.54□□□□□ -0.4
SEC24C-201ENST00000339365 ARMC9Q7Z3E5 817 aa12.54□□□□□ -0.4
SEC24C-201ENST00000339365 SP8Q8IXZ3 490 aa12.54□□□□□ -0.4
SEC24C-201ENST00000339365 IBTKQ9P2D0 1353 aaPredicted RBP12.54□□□□□ -0.4
SEC24C-201ENST00000339365 USP42Q9H9J4 1324 aaKnown RBP12.54□□□□□ -0.4
SEC24C-201ENST00000339365 BTDP43251 543 aa12.54□□□□□ -0.4
SEC24C-201ENST00000339365 NRKQ7Z2Y5 1582 aa12.53□□□□□ -0.4
SEC24C-201ENST00000339365 CAMTA2O94983 1202 aa12.53□□□□□ -0.4
SEC24C-201ENST00000339365 CHMLP26374 656 aa12.53□□□□□ -0.4
SEC24C-201ENST00000339365 VTI1AQ96AJ9 217 aa12.53□□□□□ -0.4
SEC24C-201ENST00000339365 RRP36Q96EU6 259 aaKnown RBP12.53□□□□□ -0.4
SEC24C-201ENST00000339365 TANGO6Q9C0B7 1094 aa12.53□□□□□ -0.4
SEC24C-201ENST00000339365 ARPP21Q9UBL0 812 aaPredicted RBP12.53□□□□□ -0.4
SEC24C-201ENST00000339365 IGKV5-2P06315 115 aa12.53□□□□□ -0.4
SEC24C-201ENST00000339365 STIM1Q13586 685 aa12.53□□□□□ -0.4
SEC24C-201ENST00000339365 TNS2Q63HR2 1409 aa12.53□□□□□ -0.4
SEC24C-201ENST00000339365 PDE6AP16499 860 aa12.52□□□□□ -0.4
SEC24C-201ENST00000339365 SMIM5Q71RC9 77 aa12.52□□□□□ -0.4
SEC24C-201ENST00000339365 PARP1P09874 1014 aaKnown RBP12.52□□□□□ -0.4
SEC24C-201ENST00000339365 ZYXQ15942 572 aaKnown RBP12.52□□□□□ -0.4
SEC24C-201ENST00000339365 CLRN2A0PK11 232 aa12.52□□□□□ -0.41
SEC24C-201ENST00000339365 KIF22Q14807 665 aa12.52□□□□□ -0.41
SEC24C-201ENST00000339365 COL23A1Q86Y22 540 aaPredicted RBP12.52□□□□□ -0.41
SEC24C-201ENST00000339365 ECM2O94769 699 aaPredicted RBP12.52□□□□□ -0.41
SEC24C-201ENST00000339365 RAB11FIP4Q86YS3 637 aa12.52□□□□□ -0.41
SEC24C-201ENST00000339365 CELF1Q92879 486 aaKnown RBP12.52□□□□□ -0.41
SEC24C-201ENST00000339365 NAT10Q9H0A0 1025 aaKnown RBP12.52□□□□□ -0.41
SEC24C-201ENST00000339365 KDM2BQ8NHM5 1336 aa12.52□□□□□ -0.41
SEC24C-201ENST00000339365 SPDYE3A6NKU9 549 aa12.51□□□□□ -0.41
SEC24C-201ENST00000339365 IPO7O95373 1038 aaKnown RBP12.51□□□□□ -0.41
SEC24C-201ENST00000339365 MBD3O95983 291 aa12.51□□□□□ -0.41
SEC24C-201ENST00000339365 NAPAP54920 295 aa12.51□□□□□ -0.41
SEC24C-201ENST00000339365 DHX32Q7L7V1 743 aaKnown RBP12.51□□□□□ -0.41
SEC24C-201ENST00000339365 HEATR3Q7Z4Q2 680 aa12.51□□□□□ -0.41
SEC24C-201ENST00000339365 MINPP1Q9UNW1 487 aa12.51□□□□□ -0.41
SEC24C-201ENST00000339365 SLC1A4P43007 532 aa12.51□□□□□ -0.41
SEC24C-201ENST00000339365 SKAP1Q86WV1 359 aa12.51□□□□□ -0.41
SEC24C-201ENST00000339365 ZNF277Q9NRM2 450 aaPredicted RBP12.51□□□□□ -0.41
SEC24C-201ENST00000339365 ABT1Q9ULW3 272 aaKnown RBP12.51□□□□□ -0.41
SEC24C-201ENST00000339365 SAMM50Q9Y512 469 aa12.51□□□□□ -0.41
SEC24C-201ENST00000339365 ZBED4O75132 1171 aa12.51□□□□□ -0.41
SEC24C-201ENST00000339365 PTPN12Q05209 780 aaKnown RBP12.51□□□□□ -0.41
SEC24C-201ENST00000339365 LRRC2Q9BYS8 371 aa12.51□□□□□ -0.41
SEC24C-201ENST00000339365 C6orf50Q9HD87 102 aa12.51□□□□□ -0.41
SEC24C-201ENST00000339365 USP17L12C9JPN9 530 aa12.5□□□□□ -0.41
SEC24C-201ENST00000339365 USP17L21D6R901 530 aa12.5□□□□□ -0.41
SEC24C-201ENST00000339365 ZNF34Q8IZ26 560 aa12.5□□□□□ -0.41
SEC24C-201ENST00000339365 MEGF6O75095 1541 aa12.5□□□□□ -0.41
SEC24C-201ENST00000339365 PRDM1O75626 825 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms