RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 PHKA1P46020 1223 aa13.13□□□□□ -0.31
LRP1-202ENST00000338962 ST3GAL1Q11201 340 aa13.13□□□□□ -0.31
LRP1-202ENST00000338962 FOXD4L6Q3SYB3 417 aaPredicted RBP13.13□□□□□ -0.31
LRP1-202ENST00000338962 DALRD3Q5D0E6 543 aaKnown RBP13.13□□□□□ -0.31
LRP1-202ENST00000338962 FOXD4L3Q6VB84 417 aaPredicted RBP13.13□□□□□ -0.31
LRP1-202ENST00000338962 SP8Q8IXZ3 490 aa13.13□□□□□ -0.31
LRP1-202ENST00000338962 ATP6V1DQ9Y5K8 247 aa13.13□□□□□ -0.31
LRP1-202ENST00000338962 KIAA1551Q9HCM1 1747 aa13.12□□□□□ -0.31
LRP1-202ENST00000338962 ARID4AP29374 1257 aaPredicted RBP13.12□□□□□ -0.31
LRP1-202ENST00000338962 Q6ZUG5 572 aa13.12□□□□□ -0.31
LRP1-202ENST00000338962 STOX1Q6ZVD7 989 aa13.12□□□□□ -0.31
LRP1-202ENST00000338962 CTNNA3Q9UI47 895 aa13.12□□□□□ -0.31
LRP1-202ENST00000338962 ATP6V0A2Q9Y487 856 aa13.12□□□□□ -0.31
LRP1-202ENST00000338962 IDH1O75874 414 aaKnown RBP13.11□□□□□ -0.31
LRP1-202ENST00000338962 PDIA4P13667 645 aaKnown RBP13.11□□□□□ -0.31
LRP1-202ENST00000338962 MRE11P49959 708 aa13.11□□□□□ -0.31
LRP1-202ENST00000338962 SLC9C2Q5TAH2 1124 aa13.11□□□□□ -0.31
LRP1-202ENST00000338962 CC2D2BQ6DHV5 1058 aa13.11□□□□□ -0.31
LRP1-202ENST00000338962 CAVIN1Q6NZI2 390 aaKnown RBP13.11□□□□□ -0.31
LRP1-202ENST00000338962 DHX32Q7L7V1 743 aaKnown RBP13.11□□□□□ -0.31
LRP1-202ENST00000338962 AKAP11Q9UKA4 1901 aa13.11□□□□□ -0.31
LRP1-202ENST00000338962 E7EWF7 191 aa13.11□□□□□ -0.31
LRP1-202ENST00000338962 PPEF1O14829 653 aaPredicted RBP13.11□□□□□ -0.31
LRP1-202ENST00000338962 MBD3O95983 291 aa13.11□□□□□ -0.31
LRP1-202ENST00000338962 PDCP20941 246 aa13.11□□□□□ -0.31
LRP1-202ENST00000338962 STK3Q13188 491 aa13.11□□□□□ -0.31
LRP1-202ENST00000338962 PUS7LQ9H0K6 701 aaKnown RBP13.11□□□□□ -0.31
LRP1-202ENST00000338962 MINPP1Q9UNW1 487 aa13.11□□□□□ -0.31
LRP1-202ENST00000338962 GPAA1O43292 621 aa13.1□□□□□ -0.31
LRP1-202ENST00000338962 F13A1P00488 732 aa13.1□□□□□ -0.31
LRP1-202ENST00000338962 ADD2P35612 726 aa13.1□□□□□ -0.31
LRP1-202ENST00000338962 IMMTQ16891 758 aaKnown RBP13.1□□□□□ -0.31
LRP1-202ENST00000338962 GRIPAP1Q4V328 841 aa13.1□□□□□ -0.31
LRP1-202ENST00000338962 GPT2Q8TD30 523 aa13.1□□□□□ -0.31
LRP1-202ENST00000338962 COL11A2P13942 1736 aaPredicted RBP13.1□□□□□ -0.31
LRP1-202ENST00000338962 MYH7P12883 1935 aa13.1□□□□□ -0.31
LRP1-202ENST00000338962 VPS37CA5D8V6 355 aaPredicted RBP13.1□□□□□ -0.31
LRP1-202ENST00000338962 LARP1BQ659C4 914 aaKnown RBP13.1□□□□□ -0.31
LRP1-202ENST00000338962 SPATA5Q8NB90 893 aa13.1□□□□□ -0.31
LRP1-202ENST00000338962 BRF1Q92994 677 aa13.1□□□□□ -0.31
LRP1-202ENST00000338962 GTF3C6Q969F1 213 aa13.1□□□□□ -0.31
LRP1-202ENST00000338962 ARAP2Q8WZ64 1704 aa13.09□□□□□ -0.31
LRP1-202ENST00000338962 COL4A1P02462 1669 aa13.09□□□□□ -0.31
LRP1-202ENST00000338962 XRCC6P12956 609 aaKnown RBP eCLIP13.09□□□□□ -0.31
LRP1-202ENST00000338962 UBE3CQ15386 1083 aa13.09□□□□□ -0.31
LRP1-202ENST00000338962 SOGA3Q5TF21 947 aa13.09□□□□□ -0.31
LRP1-202ENST00000338962 TTLL5Q6EMB2 1281 aa13.09□□□□□ -0.31
LRP1-202ENST00000338962 LRRC2Q9BYS8 371 aa13.09□□□□□ -0.31
LRP1-202ENST00000338962 GRPEL1Q9HAV7 217 aa13.09□□□□□ -0.31
LRP1-202ENST00000338962 PIH1D3Q9NQM4 214 aaKnown RBP13.09□□□□□ -0.31
LRP1-202ENST00000338962 PODXL2Q9NZ53 605 aa13.09□□□□□ -0.31
LRP1-202ENST00000338962 MTMR6Q9Y217 621 aa13.09□□□□□ -0.31
LRP1-202ENST00000338962 BCS1LQ9Y276 419 aa13.09□□□□□ -0.31
LRP1-202ENST00000338962 SNAP23O00161 211 aa13.08□□□□□ -0.31
LRP1-202ENST00000338962 DTNBO60941 627 aa13.08□□□□□ -0.31
LRP1-202ENST00000338962 FGAP02671 866 aa13.08□□□□□ -0.31
LRP1-202ENST00000338962 CHRNDQ07001 517 aa13.08□□□□□ -0.31
LRP1-202ENST00000338962 RASGRF1Q13972 1273 aa13.08□□□□□ -0.31
LRP1-202ENST00000338962 GOLGB1Q14789 3259 aaKnown RBP13.08□□□□□ -0.32
LRP1-202ENST00000338962 SNED1Q8TER0 1413 aa13.08□□□□□ -0.32
LRP1-202ENST00000338962 FOXP2O15409 715 aa13.08□□□□□ -0.32
LRP1-202ENST00000338962 C21orf2O43822 256 aa13.08□□□□□ -0.32
LRP1-202ENST00000338962 ZSCAN23Q3MJ62 389 aa13.08□□□□□ -0.32
LRP1-202ENST00000338962 GDPD2Q9HCC8 539 aa13.08□□□□□ -0.32
LRP1-202ENST00000338962 ZNF532Q9HCE3 1301 aa13.08□□□□□ -0.32
LRP1-202ENST00000338962 DLEC1Q9Y238 1755 aa13.07□□□□□ -0.32
LRP1-202ENST00000338962 PDE6AP16499 860 aa13.07□□□□□ -0.32
LRP1-202ENST00000338962 HAND2P61296 217 aa13.07□□□□□ -0.32
LRP1-202ENST00000338962 MAP3K12Q12852 859 aa13.07□□□□□ -0.32
LRP1-202ENST00000338962 ANKRD2Q9GZV1 360 aa13.07□□□□□ -0.32
LRP1-202ENST00000338962 TMX4Q9H1E5 349 aaPredicted RBP13.07□□□□□ -0.32
LRP1-202ENST00000338962 ZNF213O14771 459 aa13.07□□□□□ -0.32
LRP1-202ENST00000338962 EXOSC10Q01780 885 aaKnown RBP13.07□□□□□ -0.32
LRP1-202ENST00000338962 CCDC93Q567U6 631 aa13.07□□□□□ -0.32
LRP1-202ENST00000338962 OLFM4Q6UX06 510 aa13.07□□□□□ -0.32
LRP1-202ENST00000338962 USP48Q86UV5 1035 aa13.07□□□□□ -0.32
LRP1-202ENST00000338962 SLC51AQ86UW1 340 aa13.07□□□□□ -0.32
LRP1-202ENST00000338962 GAS2L3Q86XJ1 694 aa13.07□□□□□ -0.32
LRP1-202ENST00000338962 RTKN2Q8IZC4 609 aa13.07□□□□□ -0.32
LRP1-202ENST00000338962 RTFDC1Q9BY42 306 aaPredicted RBP13.07□□□□□ -0.32
LRP1-202ENST00000338962 WWC3Q9ULE0 1092 aa13.07□□□□□ -0.32
LRP1-202ENST00000338962 ZNF445P59923 1031 aa13.06□□□□□ -0.32
LRP1-202ENST00000338962 TMEM87AQ8NBN3 555 aa13.06□□□□□ -0.32
LRP1-202ENST00000338962 AIDAQ96BJ3 306 aa13.06□□□□□ -0.32
LRP1-202ENST00000338962 AGXT2Q9BYV1 514 aa13.06□□□□□ -0.32
LRP1-202ENST00000338962 CNPY2Q9Y2B0 182 aa13.06□□□□□ -0.32
LRP1-202ENST00000338962 LAMA4Q16363 1823 aa13.06□□□□□ -0.32
LRP1-202ENST00000338962 APPP05067 770 aa13.05□□□□□ -0.32
LRP1-202ENST00000338962 YBX3P16989 372 aaKnown RBP eCLIP13.05□□□□□ -0.321e-10■□□□□ 8.9
LRP1-202ENST00000338962 BCAMP50895 628 aa13.05□□□□□ -0.32
LRP1-202ENST00000338962 GPSM2P81274 684 aa13.05□□□□□ -0.32
LRP1-202ENST00000338962 CSPP1Q1MSJ5 1256 aa13.05□□□□□ -0.32
LRP1-202ENST00000338962 RALYLQ86SE5 291 aaKnown RBP13.05□□□□□ -0.32
LRP1-202ENST00000338962 MPNDQ8N594 471 aa13.05□□□□□ -0.32
LRP1-202ENST00000338962 SYAP1Q96A49 352 aaPredicted RBP13.05□□□□□ -0.32
LRP1-202ENST00000338962 NSFL1CQ9UNZ2 370 aaKnown RBP13.05□□□□□ -0.32
LRP1-202ENST00000338962 LEMD3Q9Y2U8 911 aa13.05□□□□□ -0.32
LRP1-202ENST00000338962 XDHP47989 1333 aa13.05□□□□□ -0.32
LRP1-202ENST00000338962 SLX4Q8IY92 1834 aa13.05□□□□□ -0.32
LRP1-202ENST00000338962 PFKFB2O60825 505 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms