RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 CLIC4Q9Y696 253 aa13.69□□□□□ -0.22
RBM39-202ENST00000338163 NRAPQ86VF7 1730 aa13.69□□□□□ -0.22
RBM39-202ENST00000338163 NWD2Q9ULI1 1742 aa13.69□□□□□ -0.22
RBM39-202ENST00000338163 ZRANB2O95218 330 aaKnown RBP eCLIP13.68□□□□□ -0.224e-8■■■■■ 32.7
RBM39-202ENST00000338163 USPL1Q5W0Q7 1092 aa13.68□□□□□ -0.22
RBM39-202ENST00000338163 DHX32Q7L7V1 743 aaKnown RBP13.68□□□□□ -0.22
RBM39-202ENST00000338163 LINS1Q8NG48 757 aa13.68□□□□□ -0.22
RBM39-202ENST00000338163 LLPHQ9BRT6 129 aaKnown RBP13.68□□□□□ -0.22
RBM39-202ENST00000338163 CDCA7Q9BWT1 371 aaPredicted RBP13.68□□□□□ -0.22
RBM39-202ENST00000338163 KCND1Q9NSA2 647 aa13.68□□□□□ -0.22
RBM39-202ENST00000338163 A0A0G2JLW4 131 aa13.68□□□□□ -0.22
RBM39-202ENST00000338163 HOXB7P09629 217 aa13.68□□□□□ -0.22
RBM39-202ENST00000338163 MYL6BP14649 208 aa13.68□□□□□ -0.22
RBM39-202ENST00000338163 FAM193AP78312 1265 aa13.68□□□□□ -0.22
RBM39-202ENST00000338163 GPS2Q13227 327 aa13.68□□□□□ -0.22
RBM39-202ENST00000338163 MCMDC2Q4G0Z9 681 aa13.68□□□□□ -0.22
RBM39-202ENST00000338163 GJB4Q9NTQ9 266 aa13.68□□□□□ -0.22
RBM39-202ENST00000338163 CACNA1FO60840 1977 aa13.68□□□□□ -0.22
RBM39-202ENST00000338163 UBASH3AP57075 661 aa13.67□□□□□ -0.22
RBM39-202ENST00000338163 ADALQ6DHV7 355 aa13.67□□□□□ -0.22
RBM39-202ENST00000338163 TXLNBQ8N3L3 684 aa13.67□□□□□ -0.22
RBM39-202ENST00000338163 DCAF5Q96JK2 942 aa13.67□□□□□ -0.22
RBM39-202ENST00000338163 ZSWIM4Q9H7M6 989 aa13.67□□□□□ -0.22
RBM39-202ENST00000338163 DISP2A7MBM2 1401 aa13.67□□□□□ -0.22
RBM39-202ENST00000338163 ZNF609O15014 1411 aa13.67□□□□□ -0.22
RBM39-202ENST00000338163 FANCGO15287 622 aa13.67□□□□□ -0.22
RBM39-202ENST00000338163 TADA3O75528 432 aa13.67□□□□□ -0.22
RBM39-202ENST00000338163 SASH3O75995 380 aa13.67□□□□□ -0.22
RBM39-202ENST00000338163 GNG11P61952 73 aa13.67□□□□□ -0.22
RBM39-202ENST00000338163 TFCP2Q12800 502 aa13.67□□□□□ -0.22
RBM39-202ENST00000338163 SMC1AQ14683 1233 aaKnown RBP13.67□□□□□ -0.22
RBM39-202ENST00000338163 ZNF772Q68DY9 489 aaPredicted RBP13.67□□□□□ -0.22
RBM39-202ENST00000338163 PDILTQ8N807 584 aa13.67□□□□□ -0.22
RBM39-202ENST00000338163 NFATC2IPQ8NCF5 419 aa13.67□□□□□ -0.22
RBM39-202ENST00000338163 IPO4Q8TEX9 1081 aaKnown RBP13.67□□□□□ -0.22
RBM39-202ENST00000338163 FEZ2Q9UHY8 353 aaPredicted RBP13.67□□□□□ -0.22
RBM39-202ENST00000338163 PHLPP2Q6ZVD8 1323 aa13.67□□□□□ -0.22
RBM39-202ENST00000338163 CCP110O43303 1012 aa13.66□□□□□ -0.22
RBM39-202ENST00000338163 ZNF202O95125 648 aa13.66□□□□□ -0.22
RBM39-202ENST00000338163 MARCKSP29966 332 aaPredicted RBP13.66□□□□□ -0.22
RBM39-202ENST00000338163 LRRFIP1Q32MZ4 808 aaKnown RBP13.66□□□□□ -0.22
RBM39-202ENST00000338163 FAM182BQ5T319 152 aa13.66□□□□□ -0.22
RBM39-202ENST00000338163 DPF2Q92785 391 aa13.66□□□□□ -0.22
RBM39-202ENST00000338163 DBNDD2Q9BQY9 259 aa13.66□□□□□ -0.22
RBM39-202ENST00000338163 EFCAB8A8MWE9 144 aa13.66□□□□□ -0.22
RBM39-202ENST00000338163 SPTLC2O15270 562 aa13.66□□□□□ -0.22
RBM39-202ENST00000338163 DDX58O95786 925 aaKnown RBP13.66□□□□□ -0.22
RBM39-202ENST00000338163 LMAN1P49257 510 aa13.66□□□□□ -0.22
RBM39-202ENST00000338163 EPHA10Q5JZY3 1008 aa13.66□□□□□ -0.22
RBM39-202ENST00000338163 C10orf67Q8IYJ2 551 aa13.66□□□□□ -0.22
RBM39-202ENST00000338163 CCDC191Q8NCU4 936 aa13.66□□□□□ -0.22
RBM39-202ENST00000338163 LRRC37A3O60309 1634 aa13.66□□□□□ -0.22
RBM39-202ENST00000338163 EP400Q96L91 3159 aa13.66□□□□□ -0.22
RBM39-202ENST00000338163 ZSCAN26Q16670 478 aa13.66□□□□□ -0.22
RBM39-202ENST00000338163 SYNE3Q6ZMZ3 975 aa13.66□□□□□ -0.22
RBM39-202ENST00000338163 LINC00301Q8NCQ3 95 aa13.66□□□□□ -0.22
RBM39-202ENST00000338163 GPHNQ9NQX3 736 aaPredicted RBP13.66□□□□□ -0.22
RBM39-202ENST00000338163 PARP3Q9Y6F1 533 aa13.66□□□□□ -0.22
RBM39-202ENST00000338163 CARMIL3Q8ND23 1372 aa13.65□□□□□ -0.22
RBM39-202ENST00000338163 HMGB1P09429 215 aaKnown RBP13.65□□□□□ -0.22
RBM39-202ENST00000338163 TOP1P11387 765 aaKnown RBP13.65□□□□□ -0.22
RBM39-202ENST00000338163 CABP4P57796 275 aa13.65□□□□□ -0.22
RBM39-202ENST00000338163 NCAPHQ15003 741 aa13.65□□□□□ -0.22
RBM39-202ENST00000338163 TNNI3KQ59H18 835 aa13.65□□□□□ -0.22
RBM39-202ENST00000338163 TRIM65Q6PJ69 517 aa13.65□□□□□ -0.22
RBM39-202ENST00000338163 MARCH10Q8NA82 808 aaPredicted RBP13.65□□□□□ -0.22
RBM39-202ENST00000338163 C8orf76Q96K31 380 aa13.65□□□□□ -0.22
RBM39-202ENST00000338163 NEUROD6Q96NK8 337 aa13.65□□□□□ -0.22
RBM39-202ENST00000338163 ARFGAP3Q9NP61 516 aa13.65□□□□□ -0.22
RBM39-202ENST00000338163 FPGT-TNNI3KV9GXZ4 949 aa13.65□□□□□ -0.22
RBM39-202ENST00000338163 CEMIPQ8WUJ3 1361 aa13.65□□□□□ -0.22
RBM39-202ENST00000338163 ATRNO75882 1429 aa13.65□□□□□ -0.22
RBM39-202ENST00000338163 GOLIM4O00461 696 aa13.65□□□□□ -0.22
RBM39-202ENST00000338163 TBC1D8O95759 1140 aa13.65□□□□□ -0.22
RBM39-202ENST00000338163 PDIA3P30101 505 aaKnown RBP13.65□□□□□ -0.22
RBM39-202ENST00000338163 NLRP12P59046 1061 aa13.65□□□□□ -0.22
RBM39-202ENST00000338163 NEXNQ0ZGT2 675 aa13.65□□□□□ -0.22
RBM39-202ENST00000338163 ATL3Q6DD88 541 aa13.65□□□□□ -0.22
RBM39-202ENST00000338163 SEPT12Q8IYM1 358 aa13.65□□□□□ -0.22
RBM39-202ENST00000338163 SRRTQ9BXP5 876 aaKnown RBP13.65□□□□□ -0.22
RBM39-202ENST00000338163 KDM6AO15550 1401 aaPredicted RBP13.64□□□□□ -0.23
RBM39-202ENST00000338163 TMEM232C9JQI7 657 aa13.64□□□□□ -0.23
RBM39-202ENST00000338163 ATP5JP18859 108 aa13.64□□□□□ -0.23
RBM39-202ENST00000338163 CASQ1P31415 396 aa13.64□□□□□ -0.23
RBM39-202ENST00000338163 CCDC158Q5M9N0 1113 aa13.64□□□□□ -0.23
RBM39-202ENST00000338163 CC2D1AQ6P1N0 951 aaPredicted RBP13.64□□□□□ -0.23
RBM39-202ENST00000338163 KCNG4Q8TDN1 519 aa13.64□□□□□ -0.23
RBM39-202ENST00000338163 WDR24Q96S15 920 aa13.64□□□□□ -0.23
RBM39-202ENST00000338163 TSPYL1Q9H0U9 437 aa13.64□□□□□ -0.23
RBM39-202ENST00000338163 RTEL1Q9NZ71 1219 aa13.64□□□□□ -0.23
RBM39-202ENST00000338163 PFKFB1P16118 471 aa13.64□□□□□ -0.23
RBM39-202ENST00000338163 PPP2R3AQ06190 1150 aa13.64□□□□□ -0.23
RBM39-202ENST00000338163 CERS3Q8IU89 383 aa13.64□□□□□ -0.23
RBM39-202ENST00000338163 SLC52A2Q9HAB3 445 aa13.64□□□□□ -0.23
RBM39-202ENST00000338163 A0A1W2PQ27 194 aa13.63□□□□□ -0.23
RBM39-202ENST00000338163 A0A1W2PQ64 194 aa13.63□□□□□ -0.23
RBM39-202ENST00000338163 A0A1W2PQD8 194 aa13.63□□□□□ -0.23
RBM39-202ENST00000338163 TRIM66O15016 1216 aa13.63□□□□□ -0.23
RBM39-202ENST00000338163 ZSCAN12O43309 604 aa13.63□□□□□ -0.23
RBM39-202ENST00000338163 TUBB4AP04350 444 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms