RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 ADGRA1Q86SQ6 560 aa17.54■□□□□ 0.4
CBX3-201ENST00000337620 SPRYD3Q8NCJ5 442 aa17.54■□□□□ 0.4
CBX3-201ENST00000337620 NSUN4Q96CB9 384 aaKnown RBP17.54■□□□□ 0.4
CBX3-201ENST00000337620 TAF6LQ9Y6J9 622 aa17.54■□□□□ 0.4
CBX3-201ENST00000337620 SALL1Q9NSC2 1324 aa17.54■□□□□ 0.4
CBX3-201ENST00000337620 FOXP2O15409 715 aa17.54■□□□□ 0.4
CBX3-201ENST00000337620 LDHBP07195 334 aaKnown RBP17.54■□□□□ 0.4
CBX3-201ENST00000337620 TGFB2P61812 414 aa17.54■□□□□ 0.4
CBX3-201ENST00000337620 CC2D2BQ6DHV5 1058 aa17.54■□□□□ 0.4
CBX3-201ENST00000337620 DZIP1Q86YF9 867 aaKnown RBP17.54■□□□□ 0.4
CBX3-201ENST00000337620 ZNF384Q8TF68 577 aa17.54■□□□□ 0.4
CBX3-201ENST00000337620 FGAP02671 866 aa17.53■□□□□ 0.4
CBX3-201ENST00000337620 TTLL5Q6EMB2 1281 aa17.53■□□□□ 0.4
CBX3-201ENST00000337620 CTNNA3Q9UI47 895 aa17.53■□□□□ 0.4
CBX3-201ENST00000337620 MAGEB6P1A0A0J9YX57 407 aa17.53■□□□□ 0.4
CBX3-201ENST00000337620 K7ELQ4 463 aaPredicted RBP17.53■□□□□ 0.4
CBX3-201ENST00000337620 CPA1P15085 419 aa17.53■□□□□ 0.4
CBX3-201ENST00000337620 GTF2IP78347 998 aa17.53■□□□□ 0.4
CBX3-201ENST00000337620 LCORLQ8N3X6 602 aa17.53■□□□□ 0.4
CBX3-201ENST00000337620 FBXW7Q969H0 707 aa17.53■□□□□ 0.4
CBX3-201ENST00000337620 PSMA5P28066 241 aa17.52■□□□□ 0.4
CBX3-201ENST00000337620 TSGA10IPQ3SY00 556 aa17.52■□□□□ 0.4
CBX3-201ENST00000337620 SGIP1Q9BQI5 828 aa17.52■□□□□ 0.4
CBX3-201ENST00000337620 TM6SF1Q9BZW5 370 aa17.52■□□□□ 0.4
CBX3-201ENST00000337620 DLEC1Q9Y238 1755 aa17.52■□□□□ 0.4
CBX3-201ENST00000337620 KIF13BQ9NQT8 1826 aa17.52■□□□□ 0.39
CBX3-201ENST00000337620 PATL2C9JE40 543 aaKnown RBP17.51■□□□□ 0.39
CBX3-201ENST00000337620 KRT32Q14532 448 aa17.51■□□□□ 0.39
CBX3-201ENST00000337620 GRIK5Q16478 980 aa17.51■□□□□ 0.39
CBX3-201ENST00000337620 RTFDC1Q9BY42 306 aaPredicted RBP17.51■□□□□ 0.39
CBX3-201ENST00000337620 PIM2Q9P1W9 311 aa17.51■□□□□ 0.39
CBX3-201ENST00000337620 CYP46A1Q9Y6A2 500 aa17.51■□□□□ 0.39
CBX3-201ENST00000337620 SLC4A4Q9Y6R1 1079 aa17.51■□□□□ 0.39
CBX3-201ENST00000337620 GNAT2P19087 354 aa17.51■□□□□ 0.39
CBX3-201ENST00000337620 MFSD14BQ5SR56 506 aa17.51■□□□□ 0.39
CBX3-201ENST00000337620 DBNDD1Q9H9R9 158 aa17.51■□□□□ 0.39
CBX3-201ENST00000337620 ZSWIM6Q9HCJ5 1215 aa17.51■□□□□ 0.39
CBX3-201ENST00000337620 PRKAB2O43741 272 aa17.5■□□□□ 0.39
CBX3-201ENST00000337620 HAND2P61296 217 aa17.5■□□□□ 0.39
CBX3-201ENST00000337620 DYNLL1P63167 89 aaKnown RBP17.5■□□□□ 0.39
CBX3-201ENST00000337620 IMMTQ16891 758 aaKnown RBP17.5■□□□□ 0.39
CBX3-201ENST00000337620 CCDC93Q567U6 631 aa17.5■□□□□ 0.39
CBX3-201ENST00000337620 NOL8Q76FK4 1167 aaKnown RBP17.5■□□□□ 0.39
CBX3-201ENST00000337620 TBC1D22AQ8WUA7 517 aa17.5■□□□□ 0.39
CBX3-201ENST00000337620 FAM205AQ6ZU69 1335 aa17.5■□□□□ 0.39
CBX3-201ENST00000337620 PTGER2P43116 358 aa17.5■□□□□ 0.39
CBX3-201ENST00000337620 RUFY3Q7L099 469 aa17.5■□□□□ 0.39
CBX3-201ENST00000337620 SUPT20HQ8NEM7 779 aa17.5■□□□□ 0.39
CBX3-201ENST00000337620 CCDC88AQ3V6T2 1871 aa17.49■□□□□ 0.39
CBX3-201ENST00000337620 ZNF213O14771 459 aa17.49■□□□□ 0.39
CBX3-201ENST00000337620 AOC3Q16853 763 aa17.49■□□□□ 0.39
CBX3-201ENST00000337620 BLOC1S2Q6QNY1 142 aa17.49■□□□□ 0.39
CBX3-201ENST00000337620 RTKN2Q8IZC4 609 aa17.49■□□□□ 0.39
CBX3-201ENST00000337620 IFNL3Q8IZI9 196 aa17.49■□□□□ 0.39
CBX3-201ENST00000337620 NEK1Q96PY6 1258 aa17.49■□□□□ 0.39
CBX3-201ENST00000337620 RIOK1Q9BRS2 568 aaKnown RBP17.49■□□□□ 0.39
CBX3-201ENST00000337620 PDRG1Q9NUG6 133 aa17.49■□□□□ 0.39
CBX3-201ENST00000337620 AATFQ9NY61 560 aaKnown RBP eCLIP17.49■□□□□ 0.39
CBX3-201ENST00000337620 RPAP1Q9BWH6 1393 aaPredicted RBP17.49■□□□□ 0.39
CBX3-201ENST00000337620 CHD4Q14839 1912 aa17.49■□□□□ 0.39
CBX3-201ENST00000337620 GSG1L2A8MUP6 293 aa17.48■□□□□ 0.39
CBX3-201ENST00000337620 HSP90AA1P07900 732 aaKnown RBP17.48■□□□□ 0.39
CBX3-201ENST00000337620 MCM2P49736 904 aa17.48■□□□□ 0.39
CBX3-201ENST00000337620 GSTO1P78417 241 aa17.48■□□□□ 0.39
CBX3-201ENST00000337620 GRIPAP1Q4V328 841 aa17.48■□□□□ 0.39
CBX3-201ENST00000337620 TMED8Q6PL24 325 aaPredicted RBP17.48■□□□□ 0.39
CBX3-201ENST00000337620 PODNQ7Z5L7 613 aa17.48■□□□□ 0.39
CBX3-201ENST00000337620 NAPBQ9H115 298 aa17.48■□□□□ 0.39
CBX3-201ENST00000337620 IGSF3O75054 1194 aa17.48■□□□□ 0.39
CBX3-201ENST00000337620 COL9A3Q14050 684 aaPredicted RBP17.48■□□□□ 0.39
CBX3-201ENST00000337620 DIXDC1Q155Q3 683 aa17.48■□□□□ 0.39
CBX3-201ENST00000337620 DALRD3Q5D0E6 543 aaKnown RBP17.48■□□□□ 0.39
CBX3-201ENST00000337620 IL27Q8NEV9 243 aa17.48■□□□□ 0.39
CBX3-201ENST00000337620 TTC14Q96N46 770 aa17.48■□□□□ 0.39
CBX3-201ENST00000337620 NACAP1Q9BZK3 213 aa17.48■□□□□ 0.39
CBX3-201ENST00000337620 SLKQ9H2G2 1235 aaPredicted RBP17.48■□□□□ 0.39
CBX3-201ENST00000337620 EPB41L4AQ9HCS5 686 aaPredicted RBP17.48■□□□□ 0.39
CBX3-201ENST00000337620 CD2APQ9Y5K6 639 aa17.48■□□□□ 0.39
CBX3-201ENST00000337620 SNED1Q8TER0 1413 aa17.47■□□□□ 0.39
CBX3-201ENST00000337620 E7EWF7 191 aa17.47■□□□□ 0.39
CBX3-201ENST00000337620 ECE2O60344 883 aa17.47■□□□□ 0.39
CBX3-201ENST00000337620 ALX1Q15699 326 aa17.47■□□□□ 0.39
CBX3-201ENST00000337620 STOX1Q6ZVD7 989 aa17.47■□□□□ 0.39
CBX3-201ENST00000337620 ILDR2Q71H61 639 aa17.47■□□□□ 0.39
CBX3-201ENST00000337620 SDR42E1Q8WUS8 393 aa17.47■□□□□ 0.39
CBX3-201ENST00000337620 PPIP5K2O43314 1243 aa17.47■□□□□ 0.39
CBX3-201ENST00000337620 TDO2P48775 406 aa17.47■□□□□ 0.39
CBX3-201ENST00000337620 AK2P54819 239 aa17.47■□□□□ 0.39
CBX3-201ENST00000337620 KIAA2012Q0VF49 1180 aa17.47■□□□□ 0.39
CBX3-201ENST00000337620 KCNQ5Q9NR82 932 aa17.47■□□□□ 0.39
CBX3-201ENST00000337620 FOXD4L1Q9NU39 408 aa17.47■□□□□ 0.39
CBX3-201ENST00000337620 LDHCP07864 332 aa17.46■□□□□ 0.39
CBX3-201ENST00000337620 RPS6KB1P23443 525 aa17.46■□□□□ 0.39
CBX3-201ENST00000337620 TCEANC2Q96MN5 208 aa17.46■□□□□ 0.39
CBX3-201ENST00000337620 MXD3Q9BW11 206 aa17.46■□□□□ 0.39
CBX3-201ENST00000337620 MAST2Q6P0Q8 1798 aa17.46■□□□□ 0.39
CBX3-201ENST00000337620 SOGA3Q5TF21 947 aa17.45■□□□□ 0.38
CBX3-201ENST00000337620 PSMD1Q99460 953 aa17.45■□□□□ 0.38
CBX3-201ENST00000337620 LARP6Q9BRS8 491 aaKnown RBP17.45■□□□□ 0.38
CBX3-201ENST00000337620 KIAA1551Q9HCM1 1747 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms