RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 ATP6V1AP38606 617 aa15.58■□□□□ 0.08
RTN4-202ENST00000337526 ZNF75DP51815 510 aa15.58■□□□□ 0.08
RTN4-202ENST00000337526 DTHD1Q6ZMT9 781 aa15.58■□□□□ 0.08
RTN4-202ENST00000337526 CAPZA3Q96KX2 299 aa15.58■□□□□ 0.08
RTN4-202ENST00000337526 LGR6Q9HBX8 967 aa15.58■□□□□ 0.08
RTN4-202ENST00000337526 MCM9Q9NXL9 1143 aa15.58■□□□□ 0.08
RTN4-202ENST00000337526 ZNF219Q9P2Y4 722 aaPredicted RBP15.58■□□□□ 0.08
RTN4-202ENST00000337526 B4E1Z4 1266 aa15.58■□□□□ 0.08
RTN4-202ENST00000337526 EVCP57679 992 aa15.58■□□□□ 0.08
RTN4-202ENST00000337526 KRT79Q5XKE5 535 aa15.58■□□□□ 0.08
RTN4-202ENST00000337526 OTUD7BQ6GQQ9 843 aa15.58■□□□□ 0.08
RTN4-202ENST00000337526 SIRT1Q96EB6 747 aa15.58■□□□□ 0.08
RTN4-202ENST00000337526 FAM89AQ96GI7 184 aa15.58■□□□□ 0.08
RTN4-202ENST00000337526 ADGRL2O95490 1459 aa15.58■□□□□ 0.08
RTN4-202ENST00000337526 KCNA6P17658 529 aa15.58■□□□□ 0.08
RTN4-202ENST00000337526 RFC4P35249 363 aa15.58■□□□□ 0.08
RTN4-202ENST00000337526 MNAT1P51948 309 aa15.58■□□□□ 0.08
RTN4-202ENST00000337526 ATRIPQ8WXE1 791 aa15.58■□□□□ 0.08
RTN4-202ENST00000337526 SELENOOQ9BVL4 669 aa15.58■□□□□ 0.08
RTN4-202ENST00000337526 EDC4Q6P2E9 1401 aaKnown RBP15.57■□□□□ 0.08
RTN4-202ENST00000337526 AKR1B15C9JRZ8 316 aaPredicted RBP15.57■□□□□ 0.08
RTN4-202ENST00000337526 OPA1O60313 960 aa15.57■□□□□ 0.08
RTN4-202ENST00000337526 U2AF2P26368 475 aaKnown RBP eCLIP15.57■□□□□ 0.087e-8■■□□□ 13
RTN4-202ENST00000337526 KBTBD3Q8NAB2 608 aa15.57■□□□□ 0.08
RTN4-202ENST00000337526 SETDB2Q96T68 719 aa15.57■□□□□ 0.08
RTN4-202ENST00000337526 KCNH3Q9ULD8 1083 aa15.57■□□□□ 0.08
RTN4-202ENST00000337526 BICDL2A1A5D9 508 aa15.57■□□□□ 0.08
RTN4-202ENST00000337526 FSD2A1L4K1 749 aa15.57■□□□□ 0.08
RTN4-202ENST00000337526 NEBLO76041 1014 aa15.57■□□□□ 0.08
RTN4-202ENST00000337526 MYRIPQ8NFW9 859 aa15.57■□□□□ 0.08
RTN4-202ENST00000337526 VWA3AA6NCI4 1184 aa15.57■□□□□ 0.08
RTN4-202ENST00000337526 MBD4O95243 580 aa15.57■□□□□ 0.08
RTN4-202ENST00000337526 IL2RBP14784 551 aa15.57■□□□□ 0.08
RTN4-202ENST00000337526 CDC37L1Q7L3B6 337 aa15.57■□□□□ 0.08
RTN4-202ENST00000337526 TM6SF1Q9BZW5 370 aa15.57■□□□□ 0.08
RTN4-202ENST00000337526 ANGEL1Q9UNK9 670 aaKnown RBP15.57■□□□□ 0.08
RTN4-202ENST00000337526 PLVAPQ9BX97 442 aa15.56■□□□□ 0.08
RTN4-202ENST00000337526 ABCC4O15439 1325 aa15.56■□□□□ 0.08
RTN4-202ENST00000337526 IPO4Q8TEX9 1081 aaKnown RBP15.56■□□□□ 0.08
RTN4-202ENST00000337526 TBC1D5Q92609 795 aa15.56■□□□□ 0.08
RTN4-202ENST00000337526 VPS18Q9P253 973 aa15.56■□□□□ 0.08
RTN4-202ENST00000337526 TERF1P54274 439 aa15.56■□□□□ 0.08
RTN4-202ENST00000337526 CCDC174Q6PII3 467 aa15.56■□□□□ 0.08
RTN4-202ENST00000337526 BBXQ8WY36 941 aaPredicted RBP15.56■□□□□ 0.08
RTN4-202ENST00000337526 TMEM87BQ96K49 555 aa15.56■□□□□ 0.08
RTN4-202ENST00000337526 SBNO1A3KN83 1393 aa15.56■□□□□ 0.08
RTN4-202ENST00000337526 PLBD2Q8NHP8 589 aa15.56■□□□□ 0.08
RTN4-202ENST00000337526 APPBP2Q92624 585 aa15.56■□□□□ 0.08
RTN4-202ENST00000337526 GTF3C6Q969F1 213 aa15.56■□□□□ 0.08
RTN4-202ENST00000337526 SUCLG2Q96I99 432 aa15.56■□□□□ 0.08
RTN4-202ENST00000337526 FANCCQ00597 558 aa15.55■□□□□ 0.08
RTN4-202ENST00000337526 PPP2R3AQ06190 1150 aa15.55■□□□□ 0.08
RTN4-202ENST00000337526 CCDC155Q8N6L0 562 aa15.55■□□□□ 0.08
RTN4-202ENST00000337526 JAK2O60674 1132 aa15.55■□□□□ 0.08
RTN4-202ENST00000337526 SCLT1Q96NL6 688 aa15.55■□□□□ 0.08
RTN4-202ENST00000337526 PLIN2Q99541 437 aa15.55■□□□□ 0.08
RTN4-202ENST00000337526 NDUFB9Q9Y6M9 179 aa15.55■□□□□ 0.08
RTN4-202ENST00000337526 ATP2C2O75185 946 aa15.55■□□□□ 0.08
RTN4-202ENST00000337526 ZNF174Q15697 407 aa15.55■□□□□ 0.08
RTN4-202ENST00000337526 IGSF22Q8N9C0 903 aa15.55■□□□□ 0.08
RTN4-202ENST00000337526 ACSBG1Q96GR2 724 aa15.55■□□□□ 0.08
RTN4-202ENST00000337526 ZNF202O95125 648 aa15.55■□□□□ 0.08
RTN4-202ENST00000337526 GNA11P29992 359 aa15.55■□□□□ 0.08
RTN4-202ENST00000337526 CCT6AP40227 531 aaKnown RBP15.55■□□□□ 0.08
RTN4-202ENST00000337526 CCDC122Q5T0U0 273 aa15.55■□□□□ 0.08
RTN4-202ENST00000337526 USP44Q9H0E7 712 aa15.55■□□□□ 0.08
RTN4-202ENST00000337526 PKP1Q13835 747 aa15.54■□□□□ 0.08
RTN4-202ENST00000337526 GIGYF2Q6Y7W6 1299 aaKnown RBP15.54■□□□□ 0.08
RTN4-202ENST00000337526 NEK11Q8NG66 645 aa15.54■□□□□ 0.08
RTN4-202ENST00000337526 TBX22Q9Y458 520 aa15.54■□□□□ 0.08
RTN4-202ENST00000337526 VAV2P52735 878 aa15.54■□□□□ 0.08
RTN4-202ENST00000337526 DIS3L2Q8IYB7 885 aaKnown RBP15.54■□□□□ 0.08
RTN4-202ENST00000337526 TRMT2AQ8IZ69 625 aaKnown RBP15.54■□□□□ 0.08
RTN4-202ENST00000337526 TRPM2O94759 1503 aa15.54■□□□□ 0.08
RTN4-202ENST00000337526 GPAA1O43292 621 aa15.54■□□□□ 0.08
RTN4-202ENST00000337526 TNNI2P48788 182 aa15.54■□□□□ 0.08
RTN4-202ENST00000337526 EBAG9O00559 213 aa15.53■□□□□ 0.08
RTN4-202ENST00000337526 DEXIO95424 95 aa15.53■□□□□ 0.08
RTN4-202ENST00000337526 CHD1O14646 1710 aa15.53■□□□□ 0.08
RTN4-202ENST00000337526 KIAA0232Q92628 1395 aa15.53■□□□□ 0.08
RTN4-202ENST00000337526 POLR2DO15514 142 aaKnown RBP15.53■□□□□ 0.08
RTN4-202ENST00000337526 HSPA2P54652 639 aa15.53■□□□□ 0.08
RTN4-202ENST00000337526 GCKRQ14397 625 aa15.53■□□□□ 0.08
RTN4-202ENST00000337526 ME3Q16798 604 aa15.53■□□□□ 0.08
RTN4-202ENST00000337526 VPS16Q9H269 839 aa15.53■□□□□ 0.08
RTN4-202ENST00000337526 C19orf44Q9H6X5 657 aa15.53■□□□□ 0.08
RTN4-202ENST00000337526 PALD1Q9ULE6 856 aa15.53■□□□□ 0.08
RTN4-202ENST00000337526 KIF24Q5T7B8 1368 aa15.53■□□□□ 0.08
RTN4-202ENST00000337526 F8W031 263 aaPredicted RBP15.53■□□□□ 0.08
RTN4-202ENST00000337526 SSH3Q8TE77 659 aa15.53■□□□□ 0.08
RTN4-202ENST00000337526 RRP36Q96EU6 259 aaKnown RBP15.53■□□□□ 0.08
RTN4-202ENST00000337526 ZNF594Q96JF6 807 aaPredicted RBP15.53■□□□□ 0.08
RTN4-202ENST00000337526 ZMYM3Q14202 1370 aa15.53■□□□□ 0.08
RTN4-202ENST00000337526 KRT13P13646 458 aa15.52■□□□□ 0.08
RTN4-202ENST00000337526 TRAF1Q13077 416 aa15.52■□□□□ 0.08
RTN4-202ENST00000337526 GAS2L3Q86XJ1 694 aa15.52■□□□□ 0.08
RTN4-202ENST00000337526 LMBR1Q8WVP7 490 aa15.52■□□□□ 0.08
RTN4-202ENST00000337526 XAGE2Q96GT9 111 aa15.52■□□□□ 0.08
RTN4-202ENST00000337526 TBC1D8BQ0IIM8 1120 aa15.52■□□□□ 0.08
RTN4-202ENST00000337526 PICALMQ13492 652 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 185.6 ms