RNA–Protein interactions for RNA: ENST00000337273.9

TNPO1-201, Transcript of transportin 1, humanhuman

TSL 1 (best) BASIC

Gene TNPO1, Length 11,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-201ENST00000337273 Q6ZUG5 572 aa9.03□□□□□ -0.96
TNPO1-201ENST00000337273 HS2ST1Q7LGA3 356 aa9.03□□□□□ -0.96
TNPO1-201ENST00000337273 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.03□□□□□ -0.96
TNPO1-201ENST00000337273 SNRKQ9NRH2 765 aa9.03□□□□□ -0.96
TNPO1-201ENST00000337273 PARD3Q8TEW0 1356 aa9.03□□□□□ -0.96
TNPO1-201ENST00000337273 UBXN1Q04323 297 aa9.03□□□□□ -0.96
TNPO1-201ENST00000337273 CYP26C1Q6V0L0 522 aa9.03□□□□□ -0.96
TNPO1-201ENST00000337273 RASSF2P50749 326 aa9.03□□□□□ -0.96
TNPO1-201ENST00000337273 KRT79Q5XKE5 535 aa9.03□□□□□ -0.96
TNPO1-201ENST00000337273 RLBP1P12271 317 aa9.02□□□□□ -0.96
TNPO1-201ENST00000337273 RILPL1Q5EBL4 403 aa9.02□□□□□ -0.96
TNPO1-201ENST00000337273 GSTA5Q7RTV2 222 aa9.02□□□□□ -0.96
TNPO1-201ENST00000337273 NUCKS1Q9H1E3 243 aaKnown RBP9.02□□□□□ -0.96
TNPO1-201ENST00000337273 VCX3BQ9H321 246 aa9.02□□□□□ -0.96
TNPO1-201ENST00000337273 BABAM1Q9NWV8 329 aa9.02□□□□□ -0.96
TNPO1-201ENST00000337273 GBP1P32455 592 aa9.02□□□□□ -0.96
TNPO1-201ENST00000337273 ARHGEF11O15085 1522 aa9.02□□□□□ -0.97
TNPO1-201ENST00000337273 PLCD1P51178 756 aa9.02□□□□□ -0.97
TNPO1-201ENST00000337273 ANKRD13DQ6ZTN6 518 aa9.02□□□□□ -0.97
TNPO1-201ENST00000337273 CDK13Q14004 1512 aaKnown RBP9.02□□□□□ -0.97
TNPO1-201ENST00000337273 SETSIPP0DME0 302 aa9.02□□□□□ -0.97
TNPO1-201ENST00000337273 MYRIPQ8NFW9 859 aa9.02□□□□□ -0.97
TNPO1-201ENST00000337273 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.02□□□□□ -0.97
TNPO1-201ENST00000337273 GRM8O00222 908 aa9.02□□□□□ -0.97
TNPO1-201ENST00000337273 MARCKSP29966 332 aaPredicted RBP9.02□□□□□ -0.97
TNPO1-201ENST00000337273 APBB1IPQ7Z5R6 666 aaPredicted RBP9.02□□□□□ -0.97
TNPO1-201ENST00000337273 IFT20Q8IY31 132 aa9.02□□□□□ -0.97
TNPO1-201ENST00000337273 HELLSQ9NRZ9 838 aa9.02□□□□□ -0.97
TNPO1-201ENST00000337273 AOX1Q06278 1338 aa9.02□□□□□ -0.97
TNPO1-201ENST00000337273 DTHD1Q6ZMT9 781 aa9.02□□□□□ -0.97
TNPO1-201ENST00000337273 PLCB1Q9NQ66 1216 aa9.02□□□□□ -0.97
TNPO1-201ENST00000337273 PI4KAP2A4QPH2 592 aa9.02□□□□□ -0.97
TNPO1-201ENST00000337273 PPP2R3AQ06190 1150 aa9.02□□□□□ -0.97
TNPO1-201ENST00000337273 FYB2Q5VWT5 728 aa9.02□□□□□ -0.97
TNPO1-201ENST00000337273 DHX32Q7L7V1 743 aaKnown RBP9.02□□□□□ -0.97
TNPO1-201ENST00000337273 PI4KAP1Q8N8J0 262 aa9.02□□□□□ -0.97
TNPO1-201ENST00000337273 ZNF569Q5MCW4 686 aa9.02□□□□□ -0.97
TNPO1-201ENST00000337273 VCXQ9H320 206 aa9.02□□□□□ -0.97
TNPO1-201ENST00000337273 FAM184BQ9ULE4 1060 aa9.02□□□□□ -0.97
TNPO1-201ENST00000337273 HPDP32754 393 aaPredicted RBP9.01□□□□□ -0.97
TNPO1-201ENST00000337273 SEL1L2Q5TEA6 688 aa9.01□□□□□ -0.97
TNPO1-201ENST00000337273 SYNCQ9H7C4 482 aa9.01□□□□□ -0.97
TNPO1-201ENST00000337273 NKIRAS1Q9NYS0 192 aa9.01□□□□□ -0.97
TNPO1-201ENST00000337273 INTS8Q75QN2 995 aaKnown RBP9.01□□□□□ -0.97
TNPO1-201ENST00000337273 B4DLN1 442 aa9.01□□□□□ -0.97
TNPO1-201ENST00000337273 ZEB2O60315 1214 aa9.01□□□□□ -0.97
TNPO1-201ENST00000337273 MRPL12P52815 198 aaKnown RBP9.01□□□□□ -0.97
TNPO1-201ENST00000337273 KIFAP3Q92845 792 aa9.01□□□□□ -0.97
TNPO1-201ENST00000337273 GLT8D2Q9H1C3 349 aa9.01□□□□□ -0.97
TNPO1-201ENST00000337273 ATP6V0A2Q9Y487 856 aa9.01□□□□□ -0.97
TNPO1-201ENST00000337273 MTMR3Q13615 1198 aa9.01□□□□□ -0.97
TNPO1-201ENST00000337273 SYT10Q6XYQ8 523 aa9.01□□□□□ -0.97
TNPO1-201ENST00000337273 MLKLQ8NB16 471 aa9.01□□□□□ -0.97
TNPO1-201ENST00000337273 SAMM50Q9Y512 469 aa9.01□□□□□ -0.97
TNPO1-201ENST00000337273 PPFIA1Q13136 1202 aa9.01□□□□□ -0.97
TNPO1-201ENST00000337273 NAPGQ99747 312 aaPredicted RBP9.01□□□□□ -0.97
TNPO1-201ENST00000337273 BCAP29Q9UHQ4 241 aa9.01□□□□□ -0.97
TNPO1-201ENST00000337273 AFMP43652 599 aa9.01□□□□□ -0.97
TNPO1-201ENST00000337273 IRX4P78413 519 aa9.01□□□□□ -0.97
TNPO1-201ENST00000337273 LZTFL1Q9NQ48 299 aa9.01□□□□□ -0.97
TNPO1-201ENST00000337273 PARP2Q9UGN5 583 aa9.01□□□□□ -0.97
TNPO1-201ENST00000337273 UTP11Q9Y3A2 253 aaKnown RBP9.01□□□□□ -0.97
TNPO1-201ENST00000337273 PCDHB15Q9Y5E8 787 aa9.01□□□□□ -0.97
TNPO1-201ENST00000337273 ANKRD65E5RJM6 399 aa9.01□□□□□ -0.97
TNPO1-201ENST00000337273 GYS2P54840 703 aa9.01□□□□□ -0.97
TNPO1-201ENST00000337273 SELENOSQ9BQE4 189 aa9.01□□□□□ -0.97
TNPO1-201ENST00000337273 AK2P54819 239 aa9.01□□□□□ -0.97
TNPO1-201ENST00000337273 EVCP57679 992 aa9.01□□□□□ -0.97
TNPO1-201ENST00000337273 MRPL50Q8N5N7 158 aaKnown RBP9.01□□□□□ -0.97
TNPO1-201ENST00000337273 CCDC160A6NGH7 325 aa9.01□□□□□ -0.97
TNPO1-201ENST00000337273 CIB2O75838 187 aa9.01□□□□□ -0.97
TNPO1-201ENST00000337273 MRPS25P82663 173 aaKnown RBP9.01□□□□□ -0.97
TNPO1-201ENST00000337273 CCDC65Q8IXS2 484 aa9.01□□□□□ -0.97
TNPO1-201ENST00000337273 PLCG2P16885 1265 aa9□□□□□ -0.97
TNPO1-201ENST00000337273 WDR78Q5VTH9 848 aa9□□□□□ -0.97
TNPO1-201ENST00000337273 ADGRL1O94910 1474 aa9□□□□□ -0.97
TNPO1-201ENST00000337273 BICD1Q96G01 975 aa9□□□□□ -0.97
TNPO1-201ENST00000337273 ARHGAP6O43182 974 aa9□□□□□ -0.97
TNPO1-201ENST00000337273 FCHSD1Q86WN1 690 aa9□□□□□ -0.97
TNPO1-201ENST00000337273 TACO1Q9BSH4 297 aaKnown RBP9□□□□□ -0.97
TNPO1-201ENST00000337273 GUCA1BQ9UMX6 200 aa9□□□□□ -0.97
TNPO1-201ENST00000337273 LAMC3Q9Y6N6 1575 aa9□□□□□ -0.97
TNPO1-201ENST00000337273 PKP1Q13835 747 aa9□□□□□ -0.97
TNPO1-201ENST00000337273 RGS22Q8NE09 1264 aa9□□□□□ -0.97
TNPO1-201ENST00000337273 DUOX2Q9NRD8 1548 aa9□□□□□ -0.97
TNPO1-201ENST00000337273 KSR2Q6VAB6 950 aa9□□□□□ -0.97
TNPO1-201ENST00000337273 RRP36Q96EU6 259 aaKnown RBP9□□□□□ -0.97
TNPO1-201ENST00000337273 GMNNO75496 209 aa9□□□□□ -0.97
TNPO1-201ENST00000337273 LMOD1P29536 600 aaPredicted RBP9□□□□□ -0.97
TNPO1-201ENST00000337273 ASIC1P78348 528 aa9□□□□□ -0.97
TNPO1-201ENST00000337273 MAIP1Q8WWC4 291 aa9□□□□□ -0.97
TNPO1-201ENST00000337273 PAG1Q9NWQ8 432 aa9□□□□□ -0.97
TNPO1-201ENST00000337273 ZWINTO95229 277 aa9□□□□□ -0.97
TNPO1-201ENST00000337273 PPP1R7Q15435 360 aa9□□□□□ -0.97
TNPO1-201ENST00000337273 TMTC1Q8IUR5 882 aa9□□□□□ -0.97
TNPO1-201ENST00000337273 GAS8O95995 478 aa9□□□□□ -0.97
TNPO1-201ENST00000337273 CNGA1P29973 690 aa9□□□□□ -0.97
TNPO1-201ENST00000337273 PPP2R5EQ16537 467 aa9□□□□□ -0.97
TNPO1-201ENST00000337273 TSNAXIP1Q2TAA8 658 aa9□□□□□ -0.97
TNPO1-201ENST00000337273 PIK3R5Q8WYR1 880 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms