RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 MARCKSP29966 332 aaPredicted RBP14.7□□□□□ -0.06
HLCS-201ENST00000336648 PCK1P35558 622 aa14.7□□□□□ -0.06
HLCS-201ENST00000336648 B4GALNT4Q76KP1 1039 aa14.7□□□□□ -0.06
HLCS-201ENST00000336648 RAB11FIP4Q86YS3 637 aa14.7□□□□□ -0.06
HLCS-201ENST00000336648 ZCRB1Q8TBF4 217 aaKnown RBP14.7□□□□□ -0.06
HLCS-201ENST00000336648 ZNF622Q969S3 477 aaKnown RBP eCLIP14.7□□□□□ -0.06
HLCS-201ENST00000336648 SEC62Q99442 399 aaKnown RBP14.7□□□□□ -0.06
HLCS-201ENST00000336648 SH2D4AQ9H788 454 aa14.7□□□□□ -0.06
HLCS-201ENST00000336648 ASXL1Q8IXJ9 1541 aa14.7□□□□□ -0.06
HLCS-201ENST00000336648 MYL5Q02045 173 aa14.7□□□□□ -0.06
HLCS-201ENST00000336648 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.7□□□□□ -0.06
HLCS-201ENST00000336648 CHPF2Q9P2E5 772 aa14.7□□□□□ -0.06
HLCS-201ENST00000336648 RGS22Q8NE09 1264 aa14.69□□□□□ -0.06
HLCS-201ENST00000336648 NMIQ13287 307 aaPredicted RBP14.69□□□□□ -0.06
HLCS-201ENST00000336648 CFAP157Q5JU67 520 aa14.69□□□□□ -0.06
HLCS-201ENST00000336648 RNF216Q9NWF9 866 aaPredicted RBP14.69□□□□□ -0.06
HLCS-201ENST00000336648 OGFRQ9NZT2 677 aa14.69□□□□□ -0.06
HLCS-201ENST00000336648 LMBR1LQ6UX01 489 aa14.69□□□□□ -0.06
HLCS-201ENST00000336648 PLCD3Q8N3E9 789 aa14.69□□□□□ -0.06
HLCS-201ENST00000336648 ODF2LQ9ULJ1 636 aa14.69□□□□□ -0.06
HLCS-201ENST00000336648 LMOD1P29536 600 aaPredicted RBP14.69□□□□□ -0.06
HLCS-201ENST00000336648 IDI1Q13907 227 aa14.69□□□□□ -0.06
HLCS-201ENST00000336648 ZNF569Q5MCW4 686 aa14.69□□□□□ -0.06
HLCS-201ENST00000336648 HELLSQ9NRZ9 838 aa14.69□□□□□ -0.06
HLCS-201ENST00000336648 TTF2Q9UNY4 1162 aaKnown RBP14.69□□□□□ -0.06
HLCS-201ENST00000336648 CUL7Q14999 1698 aa14.69□□□□□ -0.06
HLCS-201ENST00000336648 AKR1B15C9JRZ8 316 aaPredicted RBP14.69□□□□□ -0.06
HLCS-201ENST00000336648 STMN1P16949 149 aa14.69□□□□□ -0.06
HLCS-201ENST00000336648 CERS3Q8IU89 383 aa14.69□□□□□ -0.06
HLCS-201ENST00000336648 GUCA1BQ9UMX6 200 aa14.69□□□□□ -0.06
HLCS-201ENST00000336648 INTS8Q75QN2 995 aaKnown RBP14.68□□□□□ -0.06
HLCS-201ENST00000336648 SMC1BQ8NDV3 1235 aa14.68□□□□□ -0.06
HLCS-201ENST00000336648 DCTPP1Q9H773 170 aa14.68□□□□□ -0.06
HLCS-201ENST00000336648 INF2Q27J81 1249 aa14.68□□□□□ -0.06
HLCS-201ENST00000336648 RILPL1Q5EBL4 403 aa14.68□□□□□ -0.06
HLCS-201ENST00000336648 ADAMTS2O95450 1211 aa14.68□□□□□ -0.06
HLCS-201ENST00000336648 COPS6Q7L5N1 327 aa14.68□□□□□ -0.06
HLCS-201ENST00000336648 ACTN4O43707 911 aaKnown RBP14.68□□□□□ -0.06
HLCS-201ENST00000336648 MYCNP04198 464 aaPredicted RBP14.68□□□□□ -0.06
HLCS-201ENST00000336648 XRCC6P12956 609 aaKnown RBP eCLIP14.68□□□□□ -0.06
HLCS-201ENST00000336648 RUFY3Q7L099 469 aa14.68□□□□□ -0.06
HLCS-201ENST00000336648 SV2BQ7L1I2 683 aa14.68□□□□□ -0.06
HLCS-201ENST00000336648 ERO1AQ96HE7 468 aa14.68□□□□□ -0.06
HLCS-201ENST00000336648 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.68□□□□□ -0.06
HLCS-201ENST00000336648 FRMD4BQ9Y2L6 1034 aa14.68□□□□□ -0.06
HLCS-201ENST00000336648 USH1CQ9Y6N9 552 aa14.68□□□□□ -0.06
HLCS-201ENST00000336648 CCDC117Q8IWD4 279 aaPredicted RBP14.68□□□□□ -0.06
HLCS-201ENST00000336648 BUB1BO60566 1050 aaPredicted RBP14.67□□□□□ -0.06
HLCS-201ENST00000336648 EPB41P11171 864 aaKnown RBP14.67□□□□□ -0.06
HLCS-201ENST00000336648 CREB3L3Q68CJ9 461 aa14.67□□□□□ -0.06
HLCS-201ENST00000336648 SEPT14Q6ZU15 432 aa14.67□□□□□ -0.06
HLCS-201ENST00000336648 EYA3Q99504 573 aa14.67□□□□□ -0.06
HLCS-201ENST00000336648 MAK16Q9BXY0 300 aaKnown RBP14.67□□□□□ -0.06
HLCS-201ENST00000336648 PTPDC1A2A3K4 754 aa14.67□□□□□ -0.06
HLCS-201ENST00000336648 POLR3AO14802 1390 aaPredicted RBP14.67□□□□□ -0.06
HLCS-201ENST00000336648 C11orf95C9JLR9 678 aaPredicted RBP14.67□□□□□ -0.06
HLCS-201ENST00000336648 DKC1O60832 514 aaKnown RBP eCLIP14.67□□□□□ -0.06
HLCS-201ENST00000336648 TSNAXIP1Q2TAA8 658 aa14.67□□□□□ -0.06
HLCS-201ENST00000336648 CEP85LQ5SZL2 805 aa14.67□□□□□ -0.06
HLCS-201ENST00000336648 TRMT1LQ7Z2T5 733 aaKnown RBP14.67□□□□□ -0.06
HLCS-201ENST00000336648 POTEDQ86YR6 584 aa14.67□□□□□ -0.06
HLCS-201ENST00000336648 SMAP1Q8IYB5 467 aaPredicted RBP14.67□□□□□ -0.06
HLCS-201ENST00000336648 NUP58Q9BVL2 599 aa14.67□□□□□ -0.06
HLCS-201ENST00000336648 VCXQ9H320 206 aa14.67□□□□□ -0.06
HLCS-201ENST00000336648 ABCA10Q8WWZ4 1543 aa14.67□□□□□ -0.06
HLCS-201ENST00000336648 DENND4BO75064 1496 aaPredicted RBP14.67□□□□□ -0.06
HLCS-201ENST00000336648 HMGB1P1B2RPK0 211 aaPredicted RBP14.67□□□□□ -0.06
HLCS-201ENST00000336648 TSHZ3Q63HK5 1081 aa14.67□□□□□ -0.06
HLCS-201ENST00000336648 PAXIP1Q6ZW49 1069 aaPredicted RBP14.67□□□□□ -0.06
HLCS-201ENST00000336648 FAM160A1Q05DH4 1040 aa14.67□□□□□ -0.06
HLCS-201ENST00000336648 PDE1CQ14123 709 aaPredicted RBP14.67□□□□□ -0.06
HLCS-201ENST00000336648 NEDD9Q14511 834 aa14.67□□□□□ -0.06
HLCS-201ENST00000336648 TTC6Q86TZ1 520 aa14.67□□□□□ -0.06
HLCS-201ENST00000336648 IQCDQ96DY2 449 aa14.67□□□□□ -0.06
HLCS-201ENST00000336648 PPP1R9BQ96SB3 815 aa14.67□□□□□ -0.06
HLCS-201ENST00000336648 BAG1Q99933 345 aaPredicted RBP14.67□□□□□ -0.06
HLCS-201ENST00000336648 LLPHQ9BRT6 129 aaKnown RBP14.67□□□□□ -0.06
HLCS-201ENST00000336648 TNNI2P48788 182 aa14.66□□□□□ -0.06
HLCS-201ENST00000336648 WDR44Q5JSH3 913 aa14.66□□□□□ -0.06
HLCS-201ENST00000336648 FYB2Q5VWT5 728 aa14.66□□□□□ -0.06
HLCS-201ENST00000336648 IFNKQ9P0W0 207 aa14.66□□□□□ -0.06
HLCS-201ENST00000336648 PCF11O94913 1555 aaKnown RBP14.66□□□□□ -0.06
HLCS-201ENST00000336648 ZEB2O60315 1214 aa14.66□□□□□ -0.06
HLCS-201ENST00000336648 MAP7Q14244 749 aa14.66□□□□□ -0.06
HLCS-201ENST00000336648 TMEM110-MUSTN1A8MSY1 372 aa14.66□□□□□ -0.06
HLCS-201ENST00000336648 CNNM4Q6P4Q7 775 aa14.66□□□□□ -0.06
HLCS-201ENST00000336648 ERCC5P28715 1186 aaPredicted RBP14.65□□□□□ -0.06
HLCS-201ENST00000336648 CCDC122Q5T0U0 273 aa14.65□□□□□ -0.06
HLCS-201ENST00000336648 AFAP1L2Q8N4X5 818 aa14.65□□□□□ -0.06
HLCS-201ENST00000336648 TMEM87BQ96K49 555 aa14.65□□□□□ -0.06
HLCS-201ENST00000336648 LRRC2Q9BYS8 371 aa14.65□□□□□ -0.06
HLCS-201ENST00000336648 AK2P54819 239 aa14.65□□□□□ -0.06
HLCS-201ENST00000336648 SLC8A3P57103 927 aa14.65□□□□□ -0.06
HLCS-201ENST00000336648 KCNK9Q9NPC2 374 aa14.65□□□□□ -0.06
HLCS-201ENST00000336648 FAM83GA6ND36 823 aa14.65□□□□□ -0.06
HLCS-201ENST00000336648 TPTE2Q6XPS3 522 aa14.65□□□□□ -0.06
HLCS-201ENST00000336648 ZNF830Q96NB3 372 aaPredicted RBP14.65□□□□□ -0.06
HLCS-201ENST00000336648 ZNF219Q9P2Y4 722 aaPredicted RBP14.65□□□□□ -0.06
HLCS-201ENST00000336648 STX10O60499 249 aa14.65□□□□□ -0.06
HLCS-201ENST00000336648 GJC1P36383 396 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms