RNA–Protein interactions for RNA: ENST00000336292.10

SYNM-202, Transcript of synemin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNM, Length 7,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-202ENST00000336292 LRRC27Q9C0I9 530 aa20.38■□□□□ 0.85
SYNM-202ENST00000336292 PPANQ9NQ55 473 aaKnown RBP20.38■□□□□ 0.85
SYNM-202ENST00000336292 HOXC9P31274 260 aa20.38■□□□□ 0.85
SYNM-202ENST00000336292 SNX16P57768 344 aa20.38■□□□□ 0.85
SYNM-202ENST00000336292 SLAIN2Q9P270 581 aa20.38■□□□□ 0.85
SYNM-202ENST00000336292 MAPK8IP1Q9UQF2 711 aa20.38■□□□□ 0.85
SYNM-202ENST00000336292 CLRN2A0PK11 232 aa20.37■□□□□ 0.85
SYNM-202ENST00000336292 ZNF710Q8N1W2 664 aa20.37■□□□□ 0.85
SYNM-202ENST00000336292 ABCC1P33527 1531 aa20.37■□□□□ 0.85
SYNM-202ENST00000336292 UTP14CQ5TAP6 766 aaKnown RBP20.37■□□□□ 0.85
SYNM-202ENST00000336292 SPC25Q9HBM1 224 aa20.37■□□□□ 0.85
SYNM-202ENST00000336292 FRMPD2Q68DX3 1309 aaPredicted RBP20.37■□□□□ 0.85
SYNM-202ENST00000336292 VWA3AA6NCI4 1184 aa20.37■□□□□ 0.85
SYNM-202ENST00000336292 ZBTB24O43167 697 aaPredicted RBP20.37■□□□□ 0.85
SYNM-202ENST00000336292 GNAQP50148 359 aa20.37■□□□□ 0.85
SYNM-202ENST00000336292 STRN3Q13033 797 aa20.37■□□□□ 0.85
SYNM-202ENST00000336292 LAMC3Q9Y6N6 1575 aa20.37■□□□□ 0.85
SYNM-202ENST00000336292 TRPC3Q13507 836 aa20.37■□□□□ 0.85
SYNM-202ENST00000336292 DCAF5Q96JK2 942 aa20.37■□□□□ 0.85
SYNM-202ENST00000336292 DHX29Q7Z478 1369 aaKnown RBP20.36■□□□□ 0.85
SYNM-202ENST00000336292 BACH2Q9BYV9 841 aa20.36■□□□□ 0.85
SYNM-202ENST00000336292 AZI2Q9H6S1 392 aa20.36■□□□□ 0.85
SYNM-202ENST00000336292 CNPY2Q9Y2B0 182 aa20.36■□□□□ 0.85
SYNM-202ENST00000336292 THOC2Q8NI27 1593 aaKnown RBP20.36■□□□□ 0.85
SYNM-202ENST00000336292 CCT6AP40227 531 aaKnown RBP20.36■□□□□ 0.85
SYNM-202ENST00000336292 TTC30BQ8N4P2 665 aa20.36■□□□□ 0.85
SYNM-202ENST00000336292 EYA1Q99502 592 aa20.36■□□□□ 0.85
SYNM-202ENST00000336292 STX1AQ16623 288 aa20.36■□□□□ 0.85
SYNM-202ENST00000336292 NBPF3Q9H094 633 aa20.36■□□□□ 0.85
SYNM-202ENST00000336292 TTF2Q9UNY4 1162 aaKnown RBP20.36■□□□□ 0.85
SYNM-202ENST00000336292 PPP4R3BQ5MIZ7 849 aa20.36■□□□□ 0.85
SYNM-202ENST00000336292 DENND2AQ9ULE3 1009 aa20.36■□□□□ 0.85
SYNM-202ENST00000336292 TESPA1A2RU30 521 aaPredicted RBP20.36■□□□□ 0.85
SYNM-202ENST00000336292 TTC6Q86TZ1 520 aa20.36■□□□□ 0.85
SYNM-202ENST00000336292 CAPZA3Q96KX2 299 aa20.36■□□□□ 0.85
SYNM-202ENST00000336292 SH2D4AQ9H788 454 aa20.36■□□□□ 0.85
SYNM-202ENST00000336292 PRKAG2Q9UGJ0 569 aa20.36■□□□□ 0.85
SYNM-202ENST00000336292 CUL7Q14999 1698 aa20.36■□□□□ 0.85
SYNM-202ENST00000336292 DTHD1Q6ZMT9 781 aa20.36■□□□□ 0.85
SYNM-202ENST00000336292 APOL6Q9BWW8 343 aa20.36■□□□□ 0.85
SYNM-202ENST00000336292 IQCGQ9H095 443 aaKnown RBP20.36■□□□□ 0.85
SYNM-202ENST00000336292 SDSP20132 328 aa20.35■□□□□ 0.85
SYNM-202ENST00000336292 JAKMIP2Q96AA8 810 aa20.35■□□□□ 0.85
SYNM-202ENST00000336292 UBASH3AP57075 661 aa20.35■□□□□ 0.85
SYNM-202ENST00000336292 ZMYM3Q14202 1370 aa20.35■□□□□ 0.85
SYNM-202ENST00000336292 TRAF1Q13077 416 aa20.35■□□□□ 0.85
SYNM-202ENST00000336292 GLG1Q92896 1179 aa20.35■□□□□ 0.85
SYNM-202ENST00000336292 MED10Q9BTT4 135 aa20.35■□□□□ 0.85
SYNM-202ENST00000336292 TRPC6Q9Y210 931 aa20.34■□□□□ 0.85
SYNM-202ENST00000336292 USP40Q9NVE5 1235 aa20.34■□□□□ 0.85
SYNM-202ENST00000336292 ZFYP08048 801 aaPredicted RBP20.34■□□□□ 0.85
SYNM-202ENST00000336292 FAM47AQ5JRC9 791 aa20.34■□□□□ 0.85
SYNM-202ENST00000336292 TMTC2Q8N394 836 aa20.34■□□□□ 0.85
SYNM-202ENST00000336292 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.34■□□□□ 0.85
SYNM-202ENST00000336292 LGR6Q9HBX8 967 aa20.34■□□□□ 0.85
SYNM-202ENST00000336292 GOLGA1Q92805 767 aa20.34■□□□□ 0.85
SYNM-202ENST00000336292 TTC22Q5TAA0 569 aa20.34■□□□□ 0.85
SYNM-202ENST00000336292 TXNDC16Q9P2K2 825 aa20.34■□□□□ 0.85
SYNM-202ENST00000336292 MCM4P33991 863 aa20.33■□□□□ 0.85
SYNM-202ENST00000336292 RMND1Q9NWS8 449 aa20.33■□□□□ 0.85
SYNM-202ENST00000336292 RNF113AO15541 343 aaKnown RBP20.33■□□□□ 0.85
SYNM-202ENST00000336292 ERCC5P28715 1186 aaPredicted RBP20.33■□□□□ 0.85
SYNM-202ENST00000336292 IFT74Q96LB3 600 aa20.33■□□□□ 0.85
SYNM-202ENST00000336292 PFDN4Q9NQP4 134 aa20.33■□□□□ 0.85
SYNM-202ENST00000336292 FRMD4BQ9Y2L6 1034 aa20.33■□□□□ 0.85
SYNM-202ENST00000336292 NCOA1Q15788 1441 aa20.33■□□□□ 0.85
SYNM-202ENST00000336292 CCDC172P0C7W6 258 aa20.33■□□□□ 0.84
SYNM-202ENST00000336292 ALDH1B1P30837 517 aa20.33■□□□□ 0.84
SYNM-202ENST00000336292 TXKP42681 527 aa20.33■□□□□ 0.84
SYNM-202ENST00000336292 HS2ST1Q7LGA3 356 aa20.33■□□□□ 0.84
SYNM-202ENST00000336292 ARHGEF16Q5VV41 709 aa20.33■□□□□ 0.84
SYNM-202ENST00000336292 PPM1EQ8WY54 764 aa20.33■□□□□ 0.84
SYNM-202ENST00000336292 SLC1A4P43007 532 aa20.32■□□□□ 0.84
SYNM-202ENST00000336292 TBC1D10BQ4KMP7 808 aaPredicted RBP20.32■□□□□ 0.84
SYNM-202ENST00000336292 CRCPO75575 148 aa20.32■□□□□ 0.84
SYNM-202ENST00000336292 MYL10Q9BUA6 226 aa20.32■□□□□ 0.84
SYNM-202ENST00000336292 FAM169AQ9Y6X4 670 aa20.32■□□□□ 0.84
SYNM-202ENST00000336292 MAP3K5Q99683 1374 aa20.32■□□□□ 0.84
SYNM-202ENST00000336292 A0A1B0GUL7 405 aa20.32■□□□□ 0.84
SYNM-202ENST00000336292 CFAP58Q5T655 872 aa20.32■□□□□ 0.84
SYNM-202ENST00000336292 PPP1R16BQ96T49 567 aa20.32■□□□□ 0.84
SYNM-202ENST00000336292 RTL9Q8NET4 1388 aa20.32■□□□□ 0.84
SYNM-202ENST00000336292 WDR44Q5JSH3 913 aa20.32■□□□□ 0.84
SYNM-202ENST00000336292 TSPYL6Q8N831 410 aa20.32■□□□□ 0.84
SYNM-202ENST00000336292 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.32■□□□□ 0.84
SYNM-202ENST00000336292 RNASE9P60153 205 aaKnown RBP20.32■□□□□ 0.84
SYNM-202ENST00000336292 DNAJC10Q8IXB1 793 aa20.32■□□□□ 0.84
SYNM-202ENST00000336292 ZNF830Q96NB3 372 aaPredicted RBP20.32■□□□□ 0.84
SYNM-202ENST00000336292 SPDYE16A6NNV3 312 aaPredicted RBP20.32■□□□□ 0.84
SYNM-202ENST00000336292 SLC8A3P57103 927 aa20.32■□□□□ 0.84
SYNM-202ENST00000336292 SPDYE2Q495Y8 402 aa20.32■□□□□ 0.84
SYNM-202ENST00000336292 SYCP2Q9BX26 1530 aa20.32■□□□□ 0.84
SYNM-202ENST00000336292 UBXN1Q04323 297 aa20.31■□□□□ 0.84
SYNM-202ENST00000336292 KANK3Q6NY19 840 aa20.31■□□□□ 0.84
SYNM-202ENST00000336292 CTR9Q6PD62 1173 aa20.31■□□□□ 0.84
SYNM-202ENST00000336292 RDH13Q8NBN7 331 aa20.31■□□□□ 0.84
SYNM-202ENST00000336292 SCAF11Q99590 1463 aaKnown RBP20.31■□□□□ 0.84
SYNM-202ENST00000336292 E7EVH7 732 aa20.31■□□□□ 0.84
SYNM-202ENST00000336292 PDE6BP35913 854 aa20.31■□□□□ 0.84
SYNM-202ENST00000336292 FAM193BQ96PV7 902 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms