RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 INTS4Q96HW7 963 aaKnown RBP12.9□□□□□ -0.34
POLR1B-202ENST00000333990 GTF2IP78347 998 aa12.9□□□□□ -0.35
POLR1B-202ENST00000333990 CCDC102BQ68D86 513 aa12.9□□□□□ -0.35
POLR1B-202ENST00000333990 PARP1P09874 1014 aaKnown RBP12.89□□□□□ -0.35
POLR1B-202ENST00000333990 EIF5P55010 431 aaKnown RBP12.89□□□□□ -0.35
POLR1B-202ENST00000333990 C8orf34Q49A92 452 aa12.89□□□□□ -0.35
POLR1B-202ENST00000333990 GLT8D2Q9H1C3 349 aa12.89□□□□□ -0.35
POLR1B-202ENST00000333990 PNPLA6Q8IY17 1366 aa12.89□□□□□ -0.35
POLR1B-202ENST00000333990 CHRNDQ07001 517 aa12.89□□□□□ -0.35
POLR1B-202ENST00000333990 OTUD7AQ8TE49 926 aaPredicted RBP12.89□□□□□ -0.35
POLR1B-202ENST00000333990 TNPO1Q92973 898 aaKnown RBP12.89□□□□□ -0.35
POLR1B-202ENST00000333990 NAP1L4Q99733 375 aaKnown RBP12.89□□□□□ -0.35
POLR1B-202ENST00000333990 AATFQ9NY61 560 aaKnown RBP eCLIP12.89□□□□□ -0.35
POLR1B-202ENST00000333990 ZNF532Q9HCE3 1301 aa12.89□□□□□ -0.35
POLR1B-202ENST00000333990 CAVIN2O95810 425 aa12.89□□□□□ -0.35
POLR1B-202ENST00000333990 VPS72Q15906 364 aa12.89□□□□□ -0.35
POLR1B-202ENST00000333990 GPR162Q16538 588 aa12.89□□□□□ -0.35
POLR1B-202ENST00000333990 SLC27A3Q5K4L6 730 aa12.89□□□□□ -0.35
POLR1B-202ENST00000333990 GREM2Q9H772 168 aa12.89□□□□□ -0.35
POLR1B-202ENST00000333990 TRIM75PA6NK02 468 aa12.88□□□□□ -0.35
POLR1B-202ENST00000333990 AK2P54819 239 aa12.88□□□□□ -0.35
POLR1B-202ENST00000333990 UBE2HP62256 183 aa12.88□□□□□ -0.35
POLR1B-202ENST00000333990 EAF2Q96CJ1 260 aaPredicted RBP12.88□□□□□ -0.35
POLR1B-202ENST00000333990 TTF2Q9UNY4 1162 aaKnown RBP12.88□□□□□ -0.35
POLR1B-202ENST00000333990 ZNF804BA4D1E1 1349 aa12.88□□□□□ -0.35
POLR1B-202ENST00000333990 IDEP14735 1019 aa12.88□□□□□ -0.35
POLR1B-202ENST00000333990 DESP17661 470 aa12.88□□□□□ -0.35
POLR1B-202ENST00000333990 DIP2AQ14689 1571 aa12.88□□□□□ -0.35
POLR1B-202ENST00000333990 DSCC1Q9BVC3 393 aa12.88□□□□□ -0.35
POLR1B-202ENST00000333990 ANGEL1Q9UNK9 670 aaKnown RBP12.88□□□□□ -0.35
POLR1B-202ENST00000333990 NOM1Q5C9Z4 860 aaKnown RBP12.88□□□□□ -0.35
POLR1B-202ENST00000333990 ARPP21Q9UBL0 812 aaPredicted RBP12.88□□□□□ -0.35
POLR1B-202ENST00000333990 FKBP15Q5T1M5 1219 aa12.88□□□□□ -0.35
POLR1B-202ENST00000333990 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.88□□□□□ -0.35
POLR1B-202ENST00000333990 TMOD4Q9NZQ9 345 aa12.88□□□□□ -0.35
POLR1B-202ENST00000333990 CHMP4BP1P59074 171 aa12.87□□□□□ -0.35
POLR1B-202ENST00000333990 APOBRQ0VD83 1088 aa12.87□□□□□ -0.35
POLR1B-202ENST00000333990 CFAP100Q494V2 611 aa12.87□□□□□ -0.35
POLR1B-202ENST00000333990 SAP30BPQ9UHR5 308 aaKnown RBP12.87□□□□□ -0.35
POLR1B-202ENST00000333990 DCCP43146 1447 aa12.87□□□□□ -0.35
POLR1B-202ENST00000333990 B4E1Z4 1266 aa12.87□□□□□ -0.35
POLR1B-202ENST00000333990 RAB3GAP1Q15042 981 aa12.87□□□□□ -0.35
POLR1B-202ENST00000333990 TTLL5Q6EMB2 1281 aa12.87□□□□□ -0.35
POLR1B-202ENST00000333990 UBA5Q9GZZ9 404 aa12.87□□□□□ -0.35
POLR1B-202ENST00000333990 POTEJP0CG39 1038 aa12.87□□□□□ -0.35
POLR1B-202ENST00000333990 CETN1Q12798 172 aa12.87□□□□□ -0.35
POLR1B-202ENST00000333990 BRAPQ7Z569 592 aa12.87□□□□□ -0.35
POLR1B-202ENST00000333990 PPEF1O14829 653 aaPredicted RBP12.86□□□□□ -0.35
POLR1B-202ENST00000333990 ZNF397Q8NF99 534 aaPredicted RBP12.86□□□□□ -0.35
POLR1B-202ENST00000333990 NARFQ9UHQ1 456 aa12.86□□□□□ -0.35
POLR1B-202ENST00000333990 ATP10DQ9P241 1426 aa12.86□□□□□ -0.35
POLR1B-202ENST00000333990 CAMK4Q16566 473 aa12.86□□□□□ -0.35
POLR1B-202ENST00000333990 USP48Q86UV5 1035 aa12.86□□□□□ -0.35
POLR1B-202ENST00000333990 SLC27A2O14975 620 aa12.86□□□□□ -0.35
POLR1B-202ENST00000333990 RPS6KB1P23443 525 aa12.86□□□□□ -0.35
POLR1B-202ENST00000333990 GYG1P46976 350 aa12.86□□□□□ -0.35
POLR1B-202ENST00000333990 KLHL10Q6JEL2 608 aa12.86□□□□□ -0.35
POLR1B-202ENST00000333990 CHST3Q7LGC8 479 aa12.86□□□□□ -0.35
POLR1B-202ENST00000333990 FAM227BQ96M60 508 aa12.86□□□□□ -0.35
POLR1B-202ENST00000333990 HAUS7Q99871 368 aa12.86□□□□□ -0.35
POLR1B-202ENST00000333990 RMND1Q9NWS8 449 aa12.86□□□□□ -0.35
POLR1B-202ENST00000333990 MYO6Q9UM54 1294 aa12.86□□□□□ -0.35
POLR1B-202ENST00000333990 KIAA1210Q9ULL0 1709 aa12.86□□□□□ -0.35
POLR1B-202ENST00000333990 NRXN1Q9ULB1 1477 aa12.86□□□□□ -0.35
POLR1B-202ENST00000333990 KDM2BQ8NHM5 1336 aa12.86□□□□□ -0.35
POLR1B-202ENST00000333990 SYCE3A1L190 88 aa12.85□□□□□ -0.35
POLR1B-202ENST00000333990 PTPDC1A2A3K4 754 aa12.85□□□□□ -0.35
POLR1B-202ENST00000333990 PATL2C9JE40 543 aaKnown RBP12.85□□□□□ -0.35
POLR1B-202ENST00000333990 LRRC24Q50LG9 513 aa12.85□□□□□ -0.35
POLR1B-202ENST00000333990 CCDC129Q6ZRS4 1044 aa12.85□□□□□ -0.35
POLR1B-202ENST00000333990 GRPEL1Q9HAV7 217 aa12.85□□□□□ -0.35
POLR1B-202ENST00000333990 SOS2Q07890 1332 aaPredicted RBP12.85□□□□□ -0.35
POLR1B-202ENST00000333990 TBCAO75347 108 aaKnown RBP12.85□□□□□ -0.35
POLR1B-202ENST00000333990 KRT2P35908 639 aa12.85□□□□□ -0.35
POLR1B-202ENST00000333990 LZTS2Q9BRK4 669 aa12.85□□□□□ -0.35
POLR1B-202ENST00000333990 PRAMEF22A3QJZ6 481 aa12.85□□□□□ -0.35
POLR1B-202ENST00000333990 PLS1Q14651 629 aa12.85□□□□□ -0.35
POLR1B-202ENST00000333990 ATL3Q6DD88 541 aa12.85□□□□□ -0.35
POLR1B-202ENST00000333990 FAM43AQ8N2R8 423 aa12.85□□□□□ -0.35
POLR1B-202ENST00000333990 USP40Q9NVE5 1235 aa12.85□□□□□ -0.35
POLR1B-202ENST00000333990 PPFIA3O75145 1194 aa12.85□□□□□ -0.35
POLR1B-202ENST00000333990 SYKP43405 635 aa12.85□□□□□ -0.35
POLR1B-202ENST00000333990 DCAF15Q66K64 600 aa12.85□□□□□ -0.35
POLR1B-202ENST00000333990 CAGE1Q8TC20 777 aa12.85□□□□□ -0.35
POLR1B-202ENST00000333990 LLPHQ9BRT6 129 aaKnown RBP12.85□□□□□ -0.35
POLR1B-202ENST00000333990 GTPBP4Q9BZE4 634 aaKnown RBP12.85□□□□□ -0.35
POLR1B-202ENST00000333990 PDE6AP16499 860 aa12.84□□□□□ -0.35
POLR1B-202ENST00000333990 ARGLU1Q9NWB6 273 aaPredicted RBP12.84□□□□□ -0.35
POLR1B-202ENST00000333990 DEXIO95424 95 aa12.84□□□□□ -0.35
POLR1B-202ENST00000333990 MYCNP04198 464 aaPredicted RBP12.84□□□□□ -0.35
POLR1B-202ENST00000333990 NPR1P16066 1061 aa12.84□□□□□ -0.35
POLR1B-202ENST00000333990 UBE3CQ15386 1083 aa12.84□□□□□ -0.35
POLR1B-202ENST00000333990 MAPKAPK5Q8IW41 473 aa12.84□□□□□ -0.35
POLR1B-202ENST00000333990 SPC24Q8NBT2 197 aa12.84□□□□□ -0.35
POLR1B-202ENST00000333990 HSPA1LP34931 641 aa12.84□□□□□ -0.35
POLR1B-202ENST00000333990 ERFEQ4G0M1 354 aa12.84□□□□□ -0.35
POLR1B-202ENST00000333990 ARHGAP27Q6ZUM4 889 aa12.84□□□□□ -0.35
POLR1B-202ENST00000333990 TM6SF1Q9BZW5 370 aa12.84□□□□□ -0.35
POLR1B-202ENST00000333990 F13A1P00488 732 aa12.83□□□□□ -0.35
POLR1B-202ENST00000333990 BCAMP50895 628 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms