RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 PPP1R12AO14974 1030 aaPredicted RBP11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 CUL4BQ13620 913 aa11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 CCDC82Q8N4S0 544 aa11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 MINDY4BA8MYZ0 360 aa11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 AKR1B10O60218 316 aa11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 MX2P20592 715 aa11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 IRX5P78411 483 aaPredicted RBP11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 PLCB3Q01970 1234 aa11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 HAUS1Q96CS2 278 aa11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 ANKRD12Q6UB98 2062 aa11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 LMNAP02545 664 aaKnown RBP11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 CNGA1P29973 690 aa11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 SYKP43405 635 aa11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 STXBP4Q6ZWJ1 553 aa11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 PPANQ9NQ55 473 aaKnown RBP11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 EXOC1Q9NV70 894 aa11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 IRAK4Q9NWZ3 460 aa11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 N4BP3O15049 544 aa11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 SPDL1Q96EA4 605 aa11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 ANKFY1Q9P2R3 1169 aa11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 CALCOCO2Q13137 446 aa11.55□□□□□ -0.56
SPTBN1-201ENST00000333896 C8orf74Q6P047 294 aa11.55□□□□□ -0.56
SPTBN1-201ENST00000333896 NUTM2AQ8IVF1 878 aaPredicted RBP11.55□□□□□ -0.56
SPTBN1-201ENST00000333896 MAK16Q9BXY0 300 aaKnown RBP11.55□□□□□ -0.56
SPTBN1-201ENST00000333896 SAMM50Q9Y512 469 aa11.55□□□□□ -0.56
SPTBN1-201ENST00000333896 IDH1O75874 414 aaKnown RBP11.55□□□□□ -0.56
SPTBN1-201ENST00000333896 ARID5AQ03989 594 aa11.55□□□□□ -0.56
SPTBN1-201ENST00000333896 HAUS7Q99871 368 aa11.55□□□□□ -0.56
SPTBN1-201ENST00000333896 RBM42Q9BTD8 480 aaKnown RBP11.55□□□□□ -0.56
SPTBN1-201ENST00000333896 MKNK2Q9HBH9 465 aa11.55□□□□□ -0.56
SPTBN1-201ENST00000333896 FHOD3Q2V2M9 1422 aa11.55□□□□□ -0.56
SPTBN1-201ENST00000333896 LIG3P49916 1009 aa11.55□□□□□ -0.56
SPTBN1-201ENST00000333896 TTC41PQ6P2S7 1318 aa11.55□□□□□ -0.56
SPTBN1-201ENST00000333896 LOC102724159A0A0B4J2E5 919 aa11.55□□□□□ -0.56
SPTBN1-201ENST00000333896 PWP2Q15269 919 aaKnown RBP11.55□□□□□ -0.56
SPTBN1-201ENST00000333896 CXorf56Q9H5V9 222 aa11.55□□□□□ -0.56
SPTBN1-201ENST00000333896 RTL1A6NKG5 1358 aa11.55□□□□□ -0.56
SPTBN1-201ENST00000333896 AKR1B15C9JRZ8 316 aaPredicted RBP11.55□□□□□ -0.56
SPTBN1-201ENST00000333896 NEK11Q8NG66 645 aa11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 TRIM47Q96LD4 638 aa11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 STRN4Q9NRL3 753 aa11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 NUTM2GQ5VZR2 741 aa11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 BCAS4Q8TDM0 211 aa11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 TCP11Q8WWU5 503 aa11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 TCP11L1Q9NUJ3 509 aa11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 ZMYM4Q5VZL5 1548 aa11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 CCDC151A5D8V7 595 aa11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 SYF2O95926 243 aaKnown RBP11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 TEX11Q8IYF3 940 aa11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 CCDC89Q8N998 374 aa11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 EHMT1Q9H9B1 1298 aa11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 SLC12A7Q9Y666 1083 aa11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 CDC25BP30305 580 aa11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 ZNF569Q5MCW4 686 aa11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 CYP26C1Q6V0L0 522 aa11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 FBXO18Q8NFZ0 1043 aa11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 FBXO41Q8TF61 875 aa11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 SLC4A2P04920 1241 aa11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 BTN2A1Q7KYR7 527 aa11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 MRPS27Q92552 414 aaKnown RBP11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 NCAPD3P42695 1498 aa11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 MAN1A2O60476 641 aa11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 RNASELQ05823 741 aaKnown RBP11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 SLC20A2Q08357 652 aa11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 NME8Q8N427 588 aa11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 ZNF75DP51815 510 aa11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 TWISTNBQ3B726 338 aaPredicted RBP11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 HSP90AA4PQ58FG1 418 aa11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 GRAMD4Q6IC98 578 aa11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 TMEM57Q8N5G2 664 aa11.54□□□□□ -0.56
SPTBN1-201ENST00000333896 F13A1P00488 732 aa11.53□□□□□ -0.56
SPTBN1-201ENST00000333896 LMNB2Q03252 620 aa11.53□□□□□ -0.56
SPTBN1-201ENST00000333896 DPH6Q7L8W6 267 aa11.53□□□□□ -0.56
SPTBN1-201ENST00000333896 KLHL14Q9P2G3 628 aa11.53□□□□□ -0.56
SPTBN1-201ENST00000333896 ESRRGP62508 458 aa11.53□□□□□ -0.56
SPTBN1-201ENST00000333896 SECISBP2LQ93073 1101 aaKnown RBP11.53□□□□□ -0.56
SPTBN1-201ENST00000333896 NLRP2Q9NX02 1062 aa11.53□□□□□ -0.56
SPTBN1-201ENST00000333896 PHLPP2Q6ZVD8 1323 aa11.53□□□□□ -0.56
SPTBN1-201ENST00000333896 TMEM232C9JQI7 657 aa11.53□□□□□ -0.56
SPTBN1-201ENST00000333896 POLR3DP05423 398 aaPredicted RBP11.53□□□□□ -0.56
SPTBN1-201ENST00000333896 PPME1Q9Y570 386 aa11.53□□□□□ -0.56
SPTBN1-201ENST00000333896 AOPEPQ8N6M6 819 aa11.53□□□□□ -0.56
SPTBN1-201ENST00000333896 KIF1BPQ96EK5 621 aa11.53□□□□□ -0.56
SPTBN1-201ENST00000333896 PARP2Q9UGN5 583 aa11.53□□□□□ -0.56
SPTBN1-201ENST00000333896 NEK1Q96PY6 1258 aa11.53□□□□□ -0.56
SPTBN1-201ENST00000333896 MROH2BQ7Z745 1585 aa11.53□□□□□ -0.56
SPTBN1-201ENST00000333896 RNF40O75150 1001 aa11.53□□□□□ -0.56
SPTBN1-201ENST00000333896 DRP2Q13474 957 aa11.53□□□□□ -0.56
SPTBN1-201ENST00000333896 VSIG1Q86XK7 387 aa11.53□□□□□ -0.56
SPTBN1-201ENST00000333896 STK38LQ9Y2H1 464 aa11.53□□□□□ -0.56
SPTBN1-201ENST00000333896 RASA3Q14644 834 aa11.53□□□□□ -0.56
SPTBN1-201ENST00000333896 CCDC194A0A1B0GVG4 234 aa11.52□□□□□ -0.56
SPTBN1-201ENST00000333896 CCDC122Q5T0U0 273 aa11.52□□□□□ -0.56
SPTBN1-201ENST00000333896 CERS3Q8IU89 383 aa11.52□□□□□ -0.56
SPTBN1-201ENST00000333896 CACYBPQ9HB71 228 aaKnown RBP11.52□□□□□ -0.56
SPTBN1-201ENST00000333896 GDPD2Q9HCC8 539 aa11.52□□□□□ -0.56
SPTBN1-201ENST00000333896 NOP53Q9NZM5 478 aaKnown RBP11.52□□□□□ -0.56
SPTBN1-201ENST00000333896 IDEP14735 1019 aa11.52□□□□□ -0.56
SPTBN1-201ENST00000333896 TMX3Q96JJ7 454 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms